Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01009266.1 Hibiscus syriacus cultivar Beakdansim tig00112921_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 1543912
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
File 1 of 7
Found at i:71 original size:39 final size:39
Alignment explanation
Indices: 14--30203 Score: 16824
Period size: 39 Copynumber: 790.0 Consensus size: 39
4 GATTATGTCG
**
14 CTCG-AACAGAAGATTTTATCTCTATTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
52 CTCGAAATAGAAGATTTTATCTCGCTTGATACACTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
91 CTCGGAACAAAAGATTTTCTCTCGTTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
130 CACGAAACAGAAGATTTTATCTCGCTTGAGATGGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
168 CTCGAAACAGAAGATTTTGTTTCGCTTGAGATAG-TT--
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
204 -T-------G-AGATTTTTTGCTCACTTGAGATAGTTACC
1 CTCGAAACAGAAGATTTTAT-CTCGCTTGAGATAGTTTCC
* * **
235 TTCGAAACAGAAGATTTTATCTCGTTTGAGATAGTTTTT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * **
274 CTTGAAACAAAATATTTTATCTCGCTAAAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
313 CTCGAAACAGAAGATTTTATCTCGCATGAGATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
352 CTCAAAATAGAATATTTTGTCTTGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
391 CTCGAAACAAAATATTTTATCTCGCTTGAGATAATTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
430 CAT-GAAACTGAAGATTTTATATCGATTGAGATAGTTTCC
1 C-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
469 AAT-GAAACAAAATATTTTATCTCGCTTGAGATAGTTTCT
1 -CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
508 CTCGAAATAGAAGATTTTATATCGCTTGAGATAGTTTGC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
547 CTTGAAACAGAATATTTTATCTCACTTGAGATACTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
586 CTCGAAACAGAAGATTTTATCTCGCTTGAGGTAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
625 CTTGAAACAGAAGATTTTATCTCGCTTGAGATAGATTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
664 CACGAAACATAAGAATTTATCTTGCTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * *
703 CTTGAAACA-AATTATTTTATATAGCTTGTGATAGTTTGC
1 CTCGAAACAGAA-GATTTTATCTCGCTTGAGATAGTTTCC
* * *
742 CTCGAAACAGAAGATTTTTTCTCTCTTGAGAAAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** * *
781 CTTGAAATTGAAGATTTTTTCTCGCTTAAGAT-GTTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TTTCC
* ** * *
820 CTCAAAATTGAAGATCTTATATCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
859 CTCGAAACAGATGATTTTATCGCGGTTGAGATCGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
898 CTCGAAA-ATTAAGATTTTATATCGCTTGAGATAGTTTTC
1 CTCGAAACA-GAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
937 CTCGGAATAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
976 CTCAAAACAGAAGATTTTATCTCGCTTAAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
** * * *
1015 CTTAAAATAGATGATTTTATCTCGGTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
1054 CTCGAAACATAACATTTTATGTCGCTTGAGATAGTTTTC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
1093 CTCGAAACAGAAAATTATT-TCTCGCTTCAGATAGATTCC
1 CTCGAAACAGAAGATT-TTATCTCGCTTGAGATAGTTTCC
*
1132 CTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
1171 CTTGAAACAGAAGATTTTTTCTCGCTTTAGATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
** * * *
1210 CTCGAAGTAGAAGATTTTGTCTCACTTGAGATAGTTGCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
1249 CTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGTTGCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
1288 CTCGAAACAGAAGATTTTTTCTCGCTTAAGATTGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
1327 CTCGAAACAGAAGATTTTTTCTCGCTTTAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** *
1366 TTCGAAACATTAGATTTTATCTCGCTTGATATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
1405 CTCGAAATAGAAGATTTTTTCTCGCTTGAGATAATTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * *
1444 CTCAAAATAGAAG-TCTTATATTGATTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
1482 CTCGAAACATAAGATTTTATCTCGCATGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
1520 ATACGAAACAAAAGATTTTATCTCACTTGAGATAATTTCC
1 CT-CGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
1560 CTCGAAATAGAAGATTTTGTCTC-CTTGTGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
1598 CTCGAAATAGATGATTTTATCTCGCTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
1637 CTC-AAATCTGAAGATTTTGA-CTCGCTTGAGATCGTTTCC
1 CTCGAAA-CAGAAGATTTT-ATCTCGCTTGAGATAGTTTCC
1676 CTCGAAACAGAAGAGTTTT-TCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGA-TTTTATCTCGCTTGAGATAGTTTCC
** *
1715 CTAAAAACAGAAGATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
1754 CTCGAAATAGAAGATTTTACCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
1793 CTTGAAACAAAAGATTTTTTCTCGCTTGAGATATTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1832 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * ** *
1871 CTTGAAATAAAATATTTTATCTCGCTAAAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
1910 CTCGAAACAGAAGATTTTGTCTCGCTTGAGATGGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
1949 CTCAAAATAGAAGATTTTATCGT-GCCTAAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATC-TCGCTTGAGATAGTTTCC
* * *
1988 CTCAAAACAGTAGATTTTATCTC-CTTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTTTCC
*
2027 CTCGAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
2066 AAT-GAAACTGAATATTTTATCTCGCTTGAGATAGTTTCC
1 -CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
2105 TTCAAAATATAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
2144 CTCGAAATAGAAGATTTTTTCTCGCTTGAGATAGTCTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** * *
2183 CTCAAAATTGAAGATCTTATATCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
2222 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
2261 CTCGAAACAGAAGATTTT-CCTCGCTTGAGATA-TTTACC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CC
* * * *
2299 CTTGAAACAGAAGAATTTACCTCGTTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
2338 CTTGAAACAAAATATTTTATCTCGGTTGGGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
2377 CTCGAAACAGAAGATTTTATGTCTCTTGAGATAGTTTTC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
2416 CTCGAAAACAGAAAATTATT-TCTCGCTTCAGATAGATTCC
1 CTCG-AAACAGAAGATT-TTATCTCGCTTGAGATAGTTTCC
*
2456 CTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
2495 CTTGAAACAGAAGATTTTTTCTCGCTTTAGATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
** * * *
2534 CTCGAAGTAGAAGATTTTGTCTCACTTGAGATAGTTGCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
2573 CTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGTTGCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
2612 CTCGATACAGAAGATTTTTTCTCGCTTAAGATTGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
2651 CTCGAAACAGAAGATTTTTTCTCGCTTTAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** *
2690 TTCGAAACATTAGATTTTATCTCGCTTGATATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
2729 CTCGAAATAGAAGATTTTTTCTCGCTTGAGATAATTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * *
2768 CTCAAAATAGAAG-TCTTATATTGATTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
2806 CTCGAAACATAAGATTTTATCTCGCATGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
2844 ATACGAAACAAAAGATTTTATCTCACTTGAGATAGTTTCC
1 CT-CGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
2884 CTCGAAATAGAAGATTTTGTCTC-CTTGTGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
2922 CTCGAAATAGATGATTTTATCTCGCTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
2961 CTC-AAATCTGAAGATTTTGA-CTCGCTTGAGATCGTTTCC
1 CTCGAAA-CAGAAGATTTT-ATCTCGCTTGAGATAGTTTCC
3000 CTCGAAACAGAAGAGTTTT-TCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGA-TTTTATCTCGCTTGAGATAGTTTCC
** *
3039 CTAAAAACAGAAGATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
3078 CTCGAAATAGAAGATTTTACCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
3117 CTTGAAACAAAAGATTTTTTCTCGCTTGAGATATTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
3156 CTCGAAAAAGAATATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * ** **
3195 CTTGAAACAAAATATTTTATCTCGCTAAAGATAGTTTTA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * **
3234 CTTGAAACAGAAGATTTTGTCTCGCTTGAGAT-GATTTAT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TTTCC
* * * *
3273 CTCAAAATAGAAGATTTTGTCTCACTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
3312 CTCAAAACATATGATTTTATATC-CTTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTTTCC
* * *
3351 CTCGAGACAAAAGATTTTATCTCGCTTGAGATATTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * *
3390 AAT-GAAA-TGAAAATTTTA--TCGATTGAGACAGTTTCT
1 -CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
3426 CTCGAAATAGAATATTTT-T-ACGGTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
3463 CTTGACAA-TGAATA-TTTATCTTGCTTGAGATACTTTCC
1 CTCGA-AACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
3501 CTCGAAACAGAAGATTTTATCTCGCTTGAGCTAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
3540 GTTGAAACAGAAGATTTTATCTCGCTTGAGATAGATTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
3579 CACGAAACATAAGATTTTATCTTGCTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
3618 CTTGAAACAAAATATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
3657 CTCGAAACAGAAGATTTT-TCTC-CTTTGACATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTTTCC
* *
3695 CTCGAAACAGATGATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* **
3734 CTTGAAATTGAAGATTTT-TCT--CTTGAGAT-GTTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TTTCC
* ** * *
3770 AC-CAAAATTGAAGATCTTATATCGCTTGAGATAGTTTCC
1 -CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
3809 CTCGAAAAAGAGGATTTTATCTCGCTTGAGATCGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
3848 CTCAAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
3887 CTCAAAATAGATGATTTTATCTCGGTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
3926 CTCGAAACAGAAGATTTTATGTCGCTTGAGATAGTTTTC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
3965 CTCAAAACAGAA-ATTTTTTCTCGCTTGTGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
4003 CTCG-AA-A-AAGAATTTATCTCACTTAAGATATTTTAC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
4039 CTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
4078 CTCGAAACAGAATATTTTATCTCGCTTGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
4116 CTACGAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CT-CGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
4156 CTCGAAACAGAAGATTTTATCTCGCTTGAGATA-TTTACC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CC
* * * * *
4195 ATAGAAACAAAAGATTTTACCTCTCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
4234 CTTGAAACAAAATATTTTATCTCGGTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
4273 CTCGAAACATAACATTTTATGTCGCTTGAGATAGTTTTC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
4312 CTCGAAACAGAAAATTATT-TCTCGCTTCAGATAGATTCC
1 CTCGAAACAGAAGATT-TTATCTCGCTTGAGATAGTTTCC
4351 CTCG-AACAGAAGA-TTT-TCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
4387 CT-GAAACAGAAGATTTTTTCTCGCTTTAGATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
4425 CTCG--A-AGTAGA-TTT-TGTCACTTGAGATAGTTGCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
4459 CTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGTTGCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
4498 CTCGAAACAGAAGATTTTTTCTCGCTTAAGATTGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
4537 CTCGAAACA-AAGATTTTTTCTCGCTTTAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** *
4575 TTCGAAACATTAGATTTTATCTCGCTTGATATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
4614 CTCGAAATAGAAGATTTTTTCTCGCTTGAGATAATTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * **
4653 CTCAAAATAGAAG-TCTTATATTTCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
4691 CTCGAAACAGAAGA-TTTATCT--CATGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
4726 ATACGAAACAAAAGATTTTATCTCACTTGAGATAGTTTCC
1 CT-CGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
4766 CTCGAAATAGAAGATTTTGTCTC-CTTGTGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
4804 CTCGAAATAGATGATTTTATCTCGCTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
4843 CTC-AAATCTGAAGATTTTGA-CTCGCTTGAGATCGTTTCC
1 CTCGAAA-CAGAAGATTTT-ATCTCGCTTGAGATAGTTTCC
4882 CTCGAAACAGAAGATTTT-TCT-GCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
** *
4919 CTAAAAACAGAAGATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
4958 CTCGAAATAGAAGATTTTACCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
4997 CTTGAAACAAAAGATTTTTTCTCGCCTGAGATATTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
5036 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * ** *
5075 CTTGAAATAAAATATTTTATCTCGCTAAAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
5114 CTCGAAACAGAAGATTTTGTCTCGCTTGAGATGGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
5153 CTCAAAATAGAAGATTTTGTCGT-GCCTAAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATC-TCGCTTGAGATAGTTTCC
* * *
5192 CTCAAAACAGTAGATTTTATCTC-CTTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTTTCC
*
5231 CTCGAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
5270 TTCAAAATATAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
5309 CTCGAAATAGAAGATTTTTTCTCGCTTGAGATAGTCTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** *
5348 CTCAAAATTGAAGA-TTTATATCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
5386 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
5425 CTCGAAACAGAAGATTTT-CCTCGCTTGAGATA-TTTACC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CC
* * *
5463 CTTGAAACAGAAGATTTTACCTCGTTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
5502 CTTG-AACAAAATATTTTAT-TCGGTTGGGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
5539 CTCGAAACAGAAGATTTTATGTCTCTTGAGATAGTTTTC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
5578 CTCAAAACAGAAAATTATT-TCTCGCTTCAGATAGATTCC
1 CTCGAAACAGAAGATT-TTATCTCGCTTGAGATAGTTTCC
*
5617 CTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
5656 CTTGAAAAAGAAGATTTTTTCTCGCTTGAGATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
5695 CTCGAAACAGAAGATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
5734 CTCGAAACAGAAGATTTTTTCTCTCTTGAGATTGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
5773 CTCGAAATAGAACATTTTTTCTTGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
5812 TTCGAAACATAAGA-TTTATATCGCTTGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
5849 CTCGAAATAGAA-TTTTTTTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
5887 CTCAAAATAGAAGATCTTATATCGCTTGAGATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
5926 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
5964 ATACGAAACCA-AAGATTTTATCTCGCTTAAGATAGTTTCC
1 CT-CGAAA-CAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
6004 CTCAAAATAGAAGATTTTGTCTCGCTTGTGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* **
6043 CTCGAAACAGAAGAGTTTATCTCGCTTGAGATAGTTTAT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
6082 CTCGAATCTGAAGATTTTGTCTCACTTGAGATCGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
6121 CTCGAAATAGAAGATTTTATCTTG-TTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
6159 CTTGAAACAAAAGATTTTTTCTCGCTTGAGATATTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
6198 CTCGAAAAAGAATATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * ** *
6237 CTTGAAACAAAATATTTTATCTCGCTAAAGATAGTTT-A
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * **
6275 CTTGAAACAGAAGATTTTGTCTCGCTTGAGAT-GATTTAT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TTTCC
* * * *
6314 CTCAAAATAGAAGATTTTGTCTCACTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
6353 CTC-AAA-ACATGA-TTTATATC-CTT-TGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
6387 CTCGAGACA-AAGATTTTATCTCGCTTGAGATA-TTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * *
6424 AAT-GAAACTGAA-AATTTAT-ACGATTGAGATAGTTTCT
1 -CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
6461 CTCGAAATAGAATATTTT-TAC-CG-TTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTAT-CTCGCTTGAGATAGTTTCC
* * * *
6498 CTTGACAA-TGAATATTTTATCT-GCTTGAGATACTTTCC
1 CTCGA-AACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
6536 CTCGAAAACAGAAGATTTTATCTCGCTTGAGCTAGTTTCC
1 CTCG-AAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
6576 GTTGAAACAGAAGATTTTATCTCGCTTGAGATATGATTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATA-GTTTCC
* *
6616 CACGAAACA-AAGATTTTATCT-GCTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
6653 CTTGAAACA-AATATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
6691 CTCAAAACAGAAGATTTTTTCTCG-TT--GATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
6727 CTCGAAACAGATGATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** *
6766 CTTGAAATTGAAGATTTT-TCTCGCTTGAGAT-GTTTTC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
6803 CAC-AAA-ATGAAGA-TTTATATCGCTTGAGATAGTTTCC
1 CTCGAAACA-GAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
6840 CTCGAAAAAGAGGATTTTATCTCGCTTGAGATCGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
6879 CTCGAAA-ATTAAGATTTTATATTGCTTGAGATAATTTTC
1 CTCGAAACA-GAAGATTTTATCTCGCTTGAGATAGTTTCC
*
6918 CTCGGAACAGAAGATTTTA-CTCGCTT-AGGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGA-GATAGTTTCC
* *
6956 CTCGAAACAGAAGATTTTATCTCGCTTGATATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
6995 CTCGAAACAGAAGATTTTATATCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
7034 TTCGAAATAGAAGATTTTGTCTCGCTTGATATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
7073 CTCGAAACAGAAGATTTTGTCTTGCATGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
** * * *
7112 CTCGAAGTAG-A-ATATTGTCT-GCTTGAGATAGGTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * *
7148 CGCGAAACAGAAGAATTTATCTCACTTAAGATATTTTAC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
7187 CTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
7226 TTCGAAATATAACATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
** * * * * *
7265 CTTAAAACAGAATATTTTATCTCACTTGAGAAAATTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
7304 CTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGCTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
7343 CTCAAAATATAAGATTTTGTCTTC-CTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATC-TCGCTTGAGATAGTTTCC
* * * *
7382 CTCGTAACAGAAGATTTTATCTCCCTTGAGATTGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
7421 ATCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
7460 CAT-GAAACAGAATATTTTATCTTGCTTGAGATA-TTT-T
1 C-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
7497 CTCGAAACAGAAGATTTTA--TCGCTT--GATA-TTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
7531 CTTGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * *
7570 TTTGAAACAAAATATTTTATCTCGGTTGAGATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* **** * * **** **
7609 CTTGGTTGAGATAG--CTTCTCTCGAAACAGA-AGATTTTAT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCC
* **** **** * * **
7648 TTCGCTTGAGATAG--TTT-TCATCGAAACAGAAATTTTTTT
1 CTCGAAACAGA-AGATTTTATC-TCGCTTGAGATA-GTTTCC
*** ** **** **
7687 CTCGCTTCAGATAGA--TTCCCTCGAAACAGA-AGATTTTTT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCC
* * * * * **
7726 CTTG---CTTG-ATATAGTT-TC-C-CTTGAAACATATGATTTTGT
1 CTCGAAAC-AGAAGAT-TTTATCTCGCTTG--AGATA-G--TTTCC
*** * *** * **
7765 CTC-ATTTGAGATAG-TTTTCTCAAAC-AGAAGAT--TTTAT
1 CTCGA-AACAGA-AGATTTTATCTCGCTTG-AGATAGTTTCC
**** ** ** **
7802 CTCGCTTGAGATAG--TTTCCCTCGAAAT-AGA-AGATTTTGG
1 CTCGAAACAGA-AGATTTTATCTCG-CTTGAGATAG--TTTCC
**** ** ** **** * **
7841 CTCGCTTGAGATTA-TTTCCCTCGAAACAGAAGAGTTTTT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAG-ATAGTTTCC
**** ** **** **
7880 CTCGCTTGAGATAG-TTTCCT-TCGAAACAGA-AGATTTTAT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCC
** ** * * **
7919 CTCG---C--TTGA--TTCCCTCGAAATATAAGAT--TTTAT
1 CTCGAAACAGAAGATTTTATCTCG--CT-TGAGATAGTTTCC
** ** **** **
7952 CTCG---CTTAAGATAGTTTCCCTCGAAACAGA-AGATTTTAT
1 CTCGAAACAGAAGAT--TTTATCTCGCTTGAGATAG--TTTCC
* * * * **** * **
7991 CTCG---CTTGATATAGTTTCTCTCGAAACAGATGATTTTAT
1 CTCGAAAC-AGA-AGATTTTATCTCGCTTGAGAT-AGTTTCC
* **** ** * * * **
8030 ATCGCTTGAGATAG--TTTCCCTCAAAACATAAGAT--TTTAT
1 CTCGAAACAGA-AGATTTTATCTC---GCTTGAGATAGTTTCC
* * **
8069 CTCG---CTTG-AGATAGTT-TC-C-CTTGAAACAGA-AGATTTTGT
1 CTCGAAAC-AGAAGAT-TTTATCTCGCTTG----AGATAG--TTTCC
* ***** ** ** * **
8108 CTTGCTTGGGATAG--TTTCCCTCGAAAT-AGAATATTTTGT
1 CTCGAAACAGA-AGATTTTATCTCG-CTTGAG-ATAGTTTCC
* **** * ** ****
8147 CTTGCTTGAGATAG--GTTCCCTCGAAACAGA-AGATTT--
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG-TTTCC
* ** * **** **
8183 ATC---ACTTAAGATTTTACCTCGAAACAGA-AGATTTTT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TTTCC
**** ** * * * **
8219 CTCGCTTGAGATAG-TTTCCT-TCGAAATAT-A-ACATTTTAT
1 CTCGAAACAGA-AGATTTTATCTCG--CT-TGAGATAGTTTCC
**** ** **** * **
8258 CTCGCTTGAGATAG--TTTCCCTTAAAAT-AGAATATTTTAT
1 CTCGAAACAGA-AGATTTTATC-TCGCTTGAG-ATAGTTTCC
*** * * ** * * **
8297 CTC-ACTTGAGAA-AATTTCTCTCGGAAT-AGAAAATTTTGT
1 CTCGA-AACAGAAGATTTTATCTC-GCTTGAG-ATAGTTTCC
**** ** ** * **
8336 CTCGCTTGAGATAG--TTTCCCTCAAAATATAAGAT--TTTGT
1 CTCGAAACAGA-AGATTTTATCTC--GCT-TGAGATAGTTTCC
* **** ** ** **
8375 CTTGCTTGAGATAG--TTTCCCTCG-TAACAGA-AGATTTTAT
1 CTCGAAACAGA-AGATTTTATCTCGCT-TGAGATAG--TTTCC
* ** **** **
8414 CTC--CATTG-AGATTGTT-TCAATCGAAACAGA-AGATTTTAT
1 CTCGAAACAGAAGATT-TTATC--TCGCTTGAGATAG--TTTCC
**** ** **** * * **
8453 CTCGCTTGAGATAG--TTTCCCAT-GAAACAAATATTTTAT
1 CTCGAAACAGA-AGATTTTATC-TCGCTTGAGATAGTTTCC
**** * * **** **
8491 CT-GCTTGAG-ATATTTTCTCTCGAAACAGA-AGATTTTAT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAG--TTTCC
* * * * * *
8529 CTCG---CTTG-AGATATT-TCTTGAAAC-AGAAGAT-TTTTAC
1 CTCGAAAC-AGAAGATTTTATCTCG---CTTG-AGATAGTTTCC
* * * * * * *
8566 CTCG---CTTG-AGATAGTT-TC-C-TTTGAAAAAAATATTCT
1 CTCGAAAC-AGAAGAT-TTTATCTCGCTTG-AGATAGT-TTCC
* * * * * **** * **
8602 ATCTGAGATTTTCTCGTTGAGATAGTT-TCTCGAAACA-AAAGATTTTA
1 CTC-GA-A---AC-AG--AAGAT-TTTATCTCGCTTGAGATAG-TTTCC
* **** **** * * * **
8649 TTCGCTTGAGATAG--TTT-TCATCGAAACAAAAATTTTTTT
1 CTCGAAACAGA-AGATTTTATC-TCGCTTGAGATA-GTTTCC
*** ** ****
8688 CTCGCTTCAGATAGA--TTCCCTCGAAACAGA-AGATTT--
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG-TTTCC
* * *** * * * * **
8724 TTTGTTGCTTG-ATATAGTT-TC-C-CTTGAAACATATGATTTTGT
1 CTCGAAAC-AGAAGAT-TTTATCTCGCTTG--AGATA-G--TTTCC
*** ***** * **
8766 CTC-ATTTGAGATAG-TTTT-TCTCAAAACAGAATATTTTAT
1 CTCGA-AACAGA-AGATTTTATCTCGCTTGAG-ATAGTTTCC
***** ** **** **
8805 CTCCCTTGAGATAG--TTTCCCTCGAAACAGA-AGATTTGT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG-TTTCC
**** ** ** ** **
8843 CTCGCTTGAGATTA-TTTCCCTCGAAAT-AGA-AGATTTTT
1 CTCGAAACAGAAGATTTTATCTCG-CTTGAGATAG-TTTCC
**** ** **** **
8881 CTCGCTTGAGATAG-TTTCCT-TCGAAACAGA-AGATTTTAT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCC
** ** * **
8920 CTCG---C--TTGA--TTCCCTCGAAATAT-AGAT--TTTAT
1 CTCGAAACAGAAGATTTTATCTCG--CT-TGAGATAGTTTCC
** ** **** **
8952 CTCG---CTTAAGATAGTTTCCCTCGAAACAGA-AGATTTTAT
1 CTCGAAACAGAAGAT--TTTATCTCGCTTGAGATAG--TTTCC
* * * * * * **
8991 CTCG---CTTGATATAGTTTCTCTCGAATAGAGAT--TTTAT
1 CTCGAAAC-AGA-AGATTTTATCTCG-CTTGAGATAGTTTCC
* * * * ** **** **
9028 ATCG---CTTGAGGTAGTTTCCCTCGAAACAGA-AGATTTTA
1 CTCGAAAC-AGAAG-ATTTTATCTCGCTTGAGATAG-TTTCC
**** * ** **
9066 CTCGCTTGAGATAG--TTT-CCTCG--AAACGA-AGATTTGT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGA-GATAG-TTTCC
* ***** ** ** * *
9102 CTTGCTTGGGATAG--TTTCCCTCGAAAT-AGAATATTTTGTCG
1 CTCGAAACAGA-AGATTTTATCTCG-CTTGAG-ATA-GTT-TCC
* * * ** **** **
9143 CTTGAGATAG--G---TTCCCTCGAAACAGA-AGAATTTAT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAG--TTTCC
* * * ***** **
9178 CTC-ACTTA-AG-ATATTTTACCTCAAAACAGA-AGATTTTTT
1 CTCGA--AACAGAAGATTTTATCTCGCTTGAGATAG--TTTCC
**** ** * * **
9217 CTCGCTTGAGATAG-TTTCCT-TCGAAATAT-A-ACA-TTTAT
1 CTCGAAACAGA-AGATTTTATCTCG--CT-TGAGATAGTTTCC
* * * **
9255 CTCG---CTTG-AGATAGTT-TC-C-CTTAAAACAGAATA-TTTAT
1 CTCGAAAC-AGAAGAT-TTTATCTCGCTT----GAG-ATAGTTTCC
*** * ** **
9293 CTC-ACTTGAGAA-A-TTTCTCTCGAAT-AGA-AGATTTGT
1 CTCGA-AACAGAAGATTTTATCTCGCTTGAGATAG-TTTCC
**** ** ** * **
9329 CTCGCTTGAGATAG--TTTCCCTCAAAATATAAGAT--TTTGT
1 CTCGAAACAGA-AGATTTTATCTC--GCT-TGAGATAGTTTCC
**** ** ** **
9368 CT-GCTTGAGATAG--TTTCCCTCG-TAACAGA-AGATTTTAT
1 CTCGAAACAGA-AGATTTTATCTCGCT-TGAGATAG--TTTCC
* * **** **
9406 CTC---CCTTG-AGATTGTT-TCAATCGAAACAGA-AGATTTTAT
1 CTCGAAAC-AGAAGATT-TTATC--TCGCTTGAGATAG--TTTCC
**** * **** * * **
9445 CTCGCTTGAGATAG-TTTCCATGAAAC-AGA-ATATTTTAT
1 CTCGAAACAGA-AGATTT-TATCTCGCTTGAGATAGTTTCC
**** * * **** **
9483 CT-GCTTGAG-ATATTTTCTCTCGAAACAGA-AGATTTTAT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAG--TTTCC
* * * **** **
9521 CTCG---CTTG-AGATTTTCTCTTGAAACAGA-AGATTTTA
1 CTCGAAAC-AGAAGATTTTATCTCGCTTGAGATAG-TTTCC
* ** * * * *
9557 CTCG---CTTG-AGATAGT-T-TC-CTTGAAACAAAATATTCTAT
1 CTCGAAAC-AGAAGATTTTATCTCGCTTG--AGATAGT-TTC--C
*** * * * * *
9595 CTCG--GTTGATATAGTTTCTCTTGGTTGAGATAGCTTT--
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG-TTTCC
*
9632 CTCGAAACAGAAGATTTTAT-TCGCTTGAGATAGTTTTC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
9670 ATCGAAACAGAA-ATTTT-TTTCGCATCAGATAGATTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
9707 CTCGAAACAGAAGATTTT-TCTTGTTTGATATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * ** *
9745 CTTGAAACATATGATTTTGTCTCATTTGAGATAGTTT-T
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
9783 CTC-AAACAGAAGA-TTTATCTCACTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
9820 CTCGAAACA-AAGATTTTGTCTCGCTTGAGAT--TATTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGT-TTCC
* * *
9857 CTCAAAATAGAAGATTTTTTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
9896 TTCGAAACAGAAGATTTTATCTCGCTT--G--A--TTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
9929 CTCGAAATATAATATTTTATCTCGCTT--GATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
9965 CTCGAAACAGAAGATTTTATCTCGTTTGATATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
10004 CTCGAAACAGAAGATTTTATATCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
10043 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
10082 CTCGAAACAGAATATTTTGTCTTGCATGGGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
** * *
10121 CTCGAAGTAG-A-ATTTTGTCTCGCTTGAGATAGGTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
10158 CTCGAAACAGAAGAATTTT-TCTCACTTAAGATATTTTAC
1 CTCGAAACAGAAG-ATTTTATCTCGCTTGAGATAGTTTCC
10197 CTCGAAACAGAAGATTTT-TCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
10235 TTCG-AATATAACATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
** * * * * *
10273 CTTAAAACAGAATATTTTATCTCACTTGAGAAAATTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
10312 CT-GAAATAGAAGATTTTATCTCGCTTGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
10349 CT--AAATATAAGATTTTGT-T-GCTTGAGATAG-TTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
10383 CTC-TAACAGAAGATTTTA--TC-CTTGAGATTGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
10418 ATCGAAA-AGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
10456 CAT-GAAACAGAATA-TTTATCTTGCTTGAGAT--TTTCT
1 C-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
10492 CTCGAAATAGAAGA-TTTGTCTCGCTTGTGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
10530 CTCGAAAATAGATGATTTTATCTCGCTTGAGATAGTTTCA
1 CTCG-AAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
10570 CTC-AATCTGAAGA-TTT-TCTCGCTTGAGATCGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
10606 CTCGAAACAGAAGAGTTTT-TCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGA-TTTTATCTCGCTTGAGATAGTTTCC
*
10645 CT-GAAAACAGAAGA-TTTGTCTCGCTTGAGATAGTTT-C
1 CTCG-AAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
10682 CTCGAAATAGAAGATTTTACCTCGCTTGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
10720 CTTGAAAC--AAGATTTTTTCTCGCTTGAGATA-TTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
10756 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * ** *
10794 CT-GAAATAAAATATTTTATCTCGCTAAAGA-A-TTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
10830 CTCGAAACAGAAGA-TTTGTCTCGCTTGAGATGGTTT--
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
10866 CTC-AAATAGAAGA-TTT-TCGT-GCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATC-TCGCTTGAGATAGTTTCC
* * *
10902 CTCAAAACAGTAGATTTTATCTC-CTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
10940 CTCGAAAAAAAAGA-TTTATCTCGCTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
10978 AT-GAAAC-GAATATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
11015 TTC--AA-ATAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
11051 CTCGAAAAAGAAGATTTTTTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** *
11090 CTCAAAATTGAAGATCTTA--TCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
11127 CTCGAAACAGAAGATTTTATCTCGCTTAAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
11166 CTCGAAAGAGAAGATTTT-CCTCGCTTGAGATA-TTTACC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CC
* * *
11204 CTTGAAACAGAAGATTTTACCTCGTTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
11243 CTTGAAACAAAATATTTTATCTCGGTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
11282 CTCAAAACAGAAGATTTTATGTCGCTTGAGATAGTTT-T
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
11320 CTCGAAACAGAAAATTATT-TCTCGCTTCAGATAGATTCC
1 CTCGAAACAGAAGATT-TTATCTCGCTTGAGATAGTTTCC
*
11359 CTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
11398 CTTGAAAAAGAAGATTTTTTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
11437 CTCGAAACAGAAGATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
11476 CTCGAAACAGAAGATTTTCTCTCTCTTGAGATTGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
11515 CTCGAAATAGAAGATTTTTTCTTGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
11554 TTCGAAACATAAGA--TTA--TCGCTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
11589 CTCG-AATAGAAGATTTT-TCTCGCTTGAGTTAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
11626 CTCAAAATAGAAGATCTTATATCGCTTGAGATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
11665 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
11703 ATACGAAACAAAAGATTTTATCTCGCTTAAGATAGTTTCC
1 CT-CGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
11743 CTCAAAATAGAAGATTTTGTCTCGCTTGTGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
11782 CTCGAAACAGAAGAGTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
11821 CT-GAAAACAAAAGATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCG-AAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
11860 CTCGAAATAGAAGATTTTATCTTG-TTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
11898 CTTGAAACAAAAGATTTT-TCTCGCTTGAGATATTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
11936 CTCGAAA-AG-A-ATTTT-TCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** **
11971 CTTGAAAC--AA-ATTTTATC-CGCTAAAGATAGTTTTA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * **
12006 CTTGAAACATAAGA-TTTGTCTCGCTTGAGATA-TTTAT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
12043 CTCAAAATAGAAGA-TTTGTCTCACTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
12081 CTCAAAATATATGATTTTATATC-CTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
12119 CTCG-AACAAAAGA--TTATCTCGCTTGAGATATTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
12155 AAT-GAAACTGAAAATTTTATATCGCTTGAGATAGTTTCT
1 -CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
12194 CTCGAAATAG-A-A-TTT-T-T-ACTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
12227 CTTGAAA-TGAATATTTTATCTTGCTTGAGATAATTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
12265 CTCGAAACAGAAGATTTTATCTCGCTTGAGCTAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
12304 GTTGAAACAGAAGATTTTATCTCGCTTGAGATAGATTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
12343 CACGAAACATAAGATTTTATCTTGCTTGAGATAGTTTCAC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTC-C
* *
12383 AT-GAAACA-AA-ATATTA--TCGCTTGAGATAGTTTCCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CC
* * *
12418 CTCGAAACAGAA-AATTT-TCTCGTTTGAAATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
12455 CTCGAAACAGATGATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* **
12494 CTTGAAATTGAAGATTTT-TCTCGC-T----T-GTTT--
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** *
12524 -TCAAAATTGAAGA-TCTA--TCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
12559 CTCAAAAAAGAGGATTTTATCTCGCTTGAGATCGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
12598 CTCGAAA-ATTAAGATTTTATATTGCTTGAGATAATTTTC
1 CTCGAAACA-GAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
12637 CTCGGAACAGAAGATTTTATCTCGCTTAAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
12676 CTCGAAACAGAAGATTTTATCTCGCTTGATATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
12715 CTCGAAACAGAAGATTTTATATAGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
12754 CTTGAAACAGAAGATTTTATCTCGCTTGAGATA-TTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
** * *
12791 CTCGAAACAGAAGATTTTGCCTTGCTTGGGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
12830 CTTGAAATAGAATATTTTGTCTCGCTTGAGATACG-ATCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATA-GTTTCC
* * * * *
12869 CTCGAAACAGAAGAATTTATCTCACTTAAGATATTTTAC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
12908 CTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
12947 TTCGAAACATAACATTTTATCTCGCTGGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
** * * * * *
12986 CTTAAAACATAATATTTTATCTCGCTTGAGAAAATTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
13025 CTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
13064 CTC-AAA-ATAAGATTTTGTCTTC-CTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATC-TCGCTTGAGATAGTTTCC
13101 CTCGTAAACAGAAGATTTTATCTC-CTTGAGAT-GTTT--
1 CTCG-AAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
13137 CTCGAAACAGAAGA-TTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
13175 CAT-GAAAC---AGA-TTTATCTTGCTTGAGAT--TTT-C
1 C-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
13207 CTCGAAACAGAAGATTTTATCTCGCTTGAGATA-TTT-T
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
13244 CTTGAAACAGAAGA-TTT-TCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** * *
13281 TTTTAAACAAAATATTTTATCTCG-TTGAGATAGTTTCTC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTC-C
* * *
13320 TTGGATCGAAACAG-A-ATTTTAT-T-TCTTGAGATAGTTTTC
1 ----CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
13359 ATCGAAAC--AA-ATTTTTTCTCGCTTGAGATAG-TTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
13394 CTCG-AA-AGAAGATTTT-TCTTCTGCTT---ATAGTTTCC
1 CTCGAAACAGAAGATTTTATC-TC-GCTTGAGATAGTTTCC
* * * * **
13429 CTTGAAACA-TAGATTTTGT-T-GTTTGAGATAGTTTTT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
13465 CTCAAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
13504 CTCGAAATAGAAGATTTTATCTCGCTTGAGATTA-TTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGA-TAGTTTCC
*
13543 CTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
13582 TTCGAAACAGAAGATTTTATCTCGCTT--G--A--TTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
13615 CTCGAAATATAAGATTTTATCTCGCTTAAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
13654 CTTGAAACAGAAGATTTTATCTCGCTTGATATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
13693 CTCGAAACAGAAGATTTTATATCGCTTGAGAAAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
13732 CTCGAAACAGTAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
13771 CTCGAAAAAG-A-ATTTTGTCTTG-TTGGGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
13807 CTCGAAATAG-A-ATTTTGTCTCGCTTGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
13843 C-CGAAACAGAAGA-TTTATCTCACTT--GATATTTTAC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
13878 CTCGAAACAGAAGATTTT-TCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
13916 TTCGAAATA-AA-ATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
** * * *
13953 CTTAAAACAGAATATTTTA--TCACTT--G--AGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
13986 CTCGAAATAGAAGA-TTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
14024 CTCAAAATATAAGATTTTGTCTTGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
14063 CTCGTAACAGAAGATTTTATCTCCCTTGAG--A-TTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
14099 ATC--AACAGAAGATTTTATCT-GCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
14135 CAT-GAAACAGAATATTTTAT-T-GCTTGAGATA-TTTCT
1 C-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
14171 CTCGAAACAGAAGATTTTATCTCGCTTGAGATA-TTT-T
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
14208 CTTGAAACAGAAGATTTTACCTCGCTTGAGATAG-TT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * *
14245 CTTGAAACA-AATATTCTATCTAGGTTGAGATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** * **** **
14283 CTTG-----GTTGATAGTT-TCTCGAAACAGA-AGATTTTA
1 CTCGAAACAGAAGAT-TTTATCTCGCTTGAGATAG-TTTCC
* **** **** * **
14317 TTCGCTTGAGATAG--TTT-TCATCGAAACAGA-AATTTTT
1 CTCGAAACAGA-AGATTTTATC-TCGCTTGAGATAGTTTCC
*** ** **** **
14354 CTCGCTTCAGATAGA--TTCCCTCGAAACAGA-AGATTTTT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG-TTTCC
* ** * * *
14392 CTTG-----GTTGA-TGTAGT-TCCCTTGAAACATATGATTTTGTCTC
1 CTCGAAACAGAAGATTTTA-TCTCGCTTG--AGATA-G---TT-TC-C
* * * * ** *
14433 ATTTGAGATAGTTTTCAAAACAGAGTTATCTCACTTGAGATAGTTTCC
1 -CTCGA-A-A-----CAGAAGA-TTTTATCTCGCTTGAGATAGTTTCC
*
14481 CTCGAAACAGAAGA-TTTGTCTCGCTTGAGATTA-TTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGA-TAGTTTCC
* *
14519 CTCGAAATAGAAGATTTTTTCTCGCTTGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
14557 CTCGAAACAGAAGA-TTTATCT--C----GAT-GATTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
14588 CTCG-AATATAAG-TTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
14625 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
14664 CTCGAAACAGAAGATTTTATATCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
14703 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
14742 CTCGAAACAGAAGATTTTGTCTTGCTTGGGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
14781 CTCGAAATAGAATATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
14820 CTCGAAACAGAAGA-TTTATCTCACTTAAGATA-TTTAC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
14857 CTCGAAACAGAAGA-TTT-TCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
14894 TTCGAAATATAACA-TTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
14932 CT-TAAA-A-CAGA-TTTAT-TCACTTGAGAT--TTT--
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
14962 CTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
15001 CTCAAAATATAAGATTTTGTCT-GCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
15039 CTCG-AAGAG-AGATTTTATATCCCTTGAGATTGTTT--
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
15074 CTCGAAACAGAAGATTTTATCTCACTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
15113 AT-G-AA-AG-ATATTTTCTCTTGCTTGAGATA-TTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
15146 CTCGAAATAGAAGATTTTTTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
15185 TTCAAAACAGAAGATTTTATCTCGCTT--G--A--TTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
15218 CTCGAAATATAAGA-TTTATCTCGCTT-AGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
15255 CTCGAAAAAGAAGATTTTATCTCGCTTGATATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
15294 CTCGAAACAGAAGATTTTATATCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
15333 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
15372 CTC-AAACAGAAGATTTT-TCTCACTTGAGATAG-TTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
15408 CTCG-AA-ATAAGA-TTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
15444 CTC-AAA-A-AAGAATTTATCTCACTTGAGATA--TT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
15477 CTCGAAAACAGAAGATTTT-TCTCGCTTGAGATAGTTT-C
1 CTCG-AAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
15515 CTCGAAATATAAGATTTTATCTCGCTTGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
15553 CT-TAAACAG-ATA-TTTATCT--CTTGAG--A-TTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
15584 CTCGAAATAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
15623 CTC-AAA-ATATAGA-TTT-TCTTGCTTGAGATAGTTT-C
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAGTTTCC
*
15658 CTCGAAACAGAAGATTTTATCTCGCTTGAGAT-GTTT-T
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
15695 CTCGAAACAGAAGATTTTAT-TCGCTTGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
15732 CT-GAAAC-----A-TTTATCTTGCTTGAGATA-TTT-T
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
15762 CTCGAAACAGAAGATTTTATCTTCGCTTGAG--A-TTT--
1 CTCGAAACAGAAGATTTTATC-TCGCTTGAGATAGTTTCC
*
15797 CTCGAAACAGAAGATTTTGTCTCGCTTGAGATAGTTT--
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
15834 C-C-AAACAGAAGATTTTATTCTCTGGTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTA-TCTC-GCTTGAGATAGTTTCC
* *
15873 CTCGAAACAGAAGATTTTGTCTCGCTTGAGATAGTTT-T
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
15911 CTCGAAACAGAA-A-TTT-TCTCGCTT--GATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
15945 C-CGAAACAGAAGATTTT-T-TCGCTTGAG-TA-TTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
15979 CTCGAAACA-TAGA-TTT-TCTCGCTTGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
16014 CTCGAAACAGAAGATTTTATCT--CTTGATGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGA-GATAGTTTCC
*
16052 CTCGAAATAGAAGATTTTATCTCGCTTGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
16090 CTCGAAATAGAAGATTTTATCTCGCTTGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
16128 CTCGAAACAGAAGATTTTATCTCGCTT--GATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
16165 CTCG-AA-A-TAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
16201 CTCGAAACAGAAGATTTTATCTCGCTTGATATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
16239 CTCGAAACAGAAGATTTT-T-TCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
16276 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
16315 CTCGAAACAGAAGATTTT-TCTTGCTTGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
16352 CTCGAAATAGAATA-TTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
16390 CTC-AAACAGAAGA-TTTATCTCACTTGAGATATTTTAC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
16427 CTCGAAACAGAAGATTTT-TCTCGCTTGAGATAGTTT--
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
16463 C-CGAAATATAACATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
16501 CT--TAA-AGAAGATTTTTATC-C-CTTGAGAT--TTT-T
1 CTCGAAACAGAAGA-TTTTATCTCGCTTGAGATAGTTTCC
*
16533 CTCGAAATAGAAGA-TTT-TCTCGCTTGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
16569 CTCAAAATA-AAGATTTTATCTTGCTTGAGAT--TTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * ** **
16605 CTCGAAATTTTAG-AGATTGT-T-TCGAAAT-AGAT--TTTAT
1 CTCGAAA---CAGAAGATTTTATCTCG-CTTGAGATAGTTTCC
* * **** *
16642 CTC---ACTTG-AGATAGTTT-CCTCGAAACAGA-AGATTT-T
1 CTCGAAAC-AGAAGAT--TTTATCTCGCTTGAGATAG-TTTCC
* * ** ** **
16678 ATCG---CTTG-AGATATTTCCCTCGAAAT-AGA-AGATTTTAT
1 CTCGAAAC-AGAAGAT-TTTATCTCG-CTTGAGATAG--TTTCC
**** ** * * *
16716 CTCGCTTGAGATAG--TTTCCCTCGAAAC-AGAAGAT-TTTATCG
1 CTCGAAACAGA-AGATTTTATCTCG---CTTG-AGATAGTT-TCC
* * *
16757 CTTGATATTTCCTCGAAAAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGA-A-----AC--AGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
16804 CTCGAAACAGAAGATTTTATCT--CTTGATATAGTTT--
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
16839 CTCGAAACAGAAGA--TT-T-T-GCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
16873 CTCG-AA-AGAA-ATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
16909 CTCGAAACAG-AGA-TTT-T-T--CTT--GATA-TTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
** *
16939 CTCGAAGTAG-A-ATTTTGT-TCTGCTTGAGATAG-TTCC
1 CTCGAAACAGAAGATTTTATCTC-GCTTGAGATAGTTTCC
*
16975 CTC--AATAG-AGA-TTT-TCT--CTTGAAGATA-TTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTG-AGATAGTTTCC
17006 CTCG-AAC-----ATTTT-TCTCGCTTGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
17037 CT-TAAATATAACATTTTATCTCGCTTGAGA-AGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
17074 CT-TAAACA-TA-A-TTTATCT--CTTGAGA-A-TTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* **
17105 CTCGAAATAGAAGATTTTGCCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
17144 CTC-AAATATAAGATTTTGTCTTGCTTGAGAT--TTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
17179 CTCGTAAC--AA-A-TTTATCTCCCTTGAGAT-GTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
** *
17212 AACGAAACAGAAGATTTCATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
17251 CAT-GAAACAG-A-ATATTATCTTGCTTGAGATA-TTT-T
1 C-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
17286 CTCGAAGCAGAAGATTTTATCTCGCTTGAGATA-TTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
17324 CTTGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
17363 TTTGAAACA-AATA-TTTA--TCGGTTGAGATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *** * **** **
17398 CTTG--GTTG-AGATAGTT-TCTCGAAACAGAATA-TATTAT
1 CTCGAAACAGAAGAT-TTTATCTCGCTTGAG-ATAGT-TTCC
* **** ***** * *
17435 TTCGCTTGAGATAG-TTTTCATCGAAAAAAAATCAGA-AGATTCC
1 CTCGAAACAGA-AGATTTT-ATC----TCGCTTGAGATAGTTTCC
* *
17478 CTCGAAACAGAAGA-TTT-TCTTGCTTGATATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
17515 CT-GAAAC--ATGATTTT-TCTCGTTTGAGATAGTTT-T
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
17549 CTC-AAACAGAAGATTTTATCTCGCTTGAGAT-GTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
17586 CTCGAAACAGAAGATTTTGTCTCGCTTGAGATTA-TTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGA-TAGTTTCC
* *
17624 CTCAAAACAGAAGATTTT-TCTCGCTTGATATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
17662 TTCG-AA-ATAAGATTTTATCTCGCTT--G--A--TTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
17693 CTCGAAATATAAGATTTTTTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
17732 CAT-GAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 C-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * **
17771 TTCGAAATAGAAGATTTTATATTTCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * ** * *
17810 CTTGAAACATAATTTTTTATCTTGCTTGAGATACTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
17849 CTCCAAAAAGAAGATTTTATCTAGC-TGTGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
17887 CTAGAAACAGAAGA-TTTATCTCGCTTGAGATAG-AT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
17923 CACGAAATAGAA-ATTTTATCTTGCTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
17961 ATTGAAACA-AA-ATTTTATCTCGCTTGAGAT-GTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
17997 CTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
18035 CTTGAAACAGAA-ATTTT-TCTCG-TTGAGATAGTTTCG
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** *
18071 CTTGAAATTGAAGATTTT-T-TCTCTTGAGA-AGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
18107 CTC-AAA-ATGAAGA---TAT-TCGCTTGAGAT-GTTTCC
1 CTCGAAACA-GAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
18140 TTCGAAATAGAAGATTTTATCTCGCTTGAGATCGTTT--
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** * * *
18177 TTCGAAA-TTAAGATTTTATATTGCTTGAGATAGTTTTC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
18215 CTCGGAATAGAAGATTTTATCTCGCTTAAGATAGTTTAC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
18254 CTCAAAACAGAAGATTTCATTTCGCTTGATATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
18293 CTCAAAATAGAAGATTTTATATCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
18332 CTCGAAACAGGAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
18371 CTTGAAACAAAAGATTTTGAT-TCGCTTGGGATAGTTTCC
1 CTCGAAACAGAAGATTTT-ATCTCGCTTGAGATAGTTTCC
* * * *
18410 CTCGAATCAGAAGATTTTATATCGCTTGAGATACTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
18449 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
18488 GTTGAAACAGAAGATTTTATCTCACTTGAGATAG-TTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
18526 CACGAAATA-AAGATTTTATCT-GCTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
18563 CTTGAAACAAAATATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* **
18602 CTCGAAACAGAAGATTTTTTCTCATTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
18641 CTCGAAACAGATGATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** * *
18680 C-CTTAAATTGAAGATTTTTTCTTGCTTGAGAT-GTTTTCC
1 CTC-GAAACAGAAGATTTTATCTCGCTTGAGATAG-TTTCC
18719 C-C-AAA-ATGAAGATTTTAT-T-GCTTGAGATAGTTTCC
1 CTCGAAACA-GAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
18754 CTCGAAACAGAGGATTTTATCTCGCTTGAGATCGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
18793 CTCGAAA-ATTAAGATTTTATATTGCTTGAGATAATTTTC
1 CTCGAAACA-GAAGATTTTATCTCGCTTGAGATAGTTTCC
*
18832 CTCGGAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * **
18871 CTCGAAATAGAAGATTTTATCTCGCTTGATATAGTTTGT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
18910 CTCGAAACATAAGATTTTATATCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
18949 CTCGAAACAAAAGATTTTATCTCTCTTGAGATAGCTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * * *
18988 CTCGAAACAAAAGAATTTATCTCACATCAGATATTTTAC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
19027 CGCGAACCATATA-ATTTTTTCTCGCTTGAGAAAGTTTCC
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAGTTTCC
* * *
19066 TTCGAAACA-ATACATTTTAACTCGCTTGAGATAGTTTCC
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
19105 CTTGAAACATAATATTTTGTCTCGCTTTAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
19144 CTTGAAACAAAATATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
19183 CTCGAAATAGAATATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
19222 CTCGAAATAGAATATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
19261 CTCCAAATAGAAGATTTTATCTTGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
** * * *
19300 CTTAAAATAGACA-A-TTTATTTCCCTTGAGATAGTTTCC
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAGTTTCC
*
19338 CTCGAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
19377 CAT-GAAACAGAAGATTTTATCTCTCTAT-AGATAGTTTCC
1 C-TCGAAACAGAAGATTTTATCTCGCT-TGAGATAGTTTCC
19416 CAT-GAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 C-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
19455 CTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * *
19494 CTAGAAGCAAAATATTTTACCTCGCTTGAGATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * *
19533 CTTGAAACAAAATATTTTATATGGGTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
19572 CTCGAAACAGAAGATTTTATGTCGCTTGAGATAGTTTTC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * ** * *
19611 CTTGAAACAAAATTTTTTTTCTCGCTTCAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
19650 TTCCAAACATAAGATTTTATCTCGCTTGAGAAAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
19689 CTCGAAATAGAAGATTTTATCTAGCTTTAGAGAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
19727 CTAAGAAACAAAAGATTTTATCTCTCTTGAGATTGTTTCC
1 CT-CGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
19767 CTTGAAACATAATATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
19806 CTCGAATCAGAAGATTTTATCTCACTTGAGATCGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
19845 CTTGAAACAGAAGAATTTT-TCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAG-ATTTTATCTCGCTTGAGATAGTTTCC
* * * *
19884 CTCGAAATAGAAGATTTTGTCTCGGTTGAGATCGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
19923 CTCGAAATAGAAGATTTTATCTCGCTTGAGATAGTTTAC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * * **
19962 CTTGAAATAAAATATTTTTTCTCGTTTGAGATTTTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
20001 CTCAAAACAGATGATTTTTTCTCCCTTGTGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
20040 TTTGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * **
20079 TTTGAAACAAAATATTTTATCTCGCTAAAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * *
20118 ATCGAAACATAATATTTTGTCTCGCTTGAGATTGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
20157 CTCAAAATAGAAGAATTTATCTC-CTTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTTTCC
20196 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* **
20235 CTTGAAATTGAAGATTTT-TCTC-CTTGAGAT-GTTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TTTCC
* ** * * *
20272 CTCAAAATTGAAGATATTATATCGCTTGAGATTGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
20311 CTCGAAATAGAGGATTTTATCTCGCTTGAGATCGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
20350 CTCGAAA-ATTAAGATTTTATATTGCTTGAGATAGTTTTC
1 CTCGAAACA-GAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
20389 CTCGTAACAGAAGATTTTATCTCGCTTGAGATAGTTTAC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
20428 CTCGACACAGAAGATTTTATCTCTCTTGATATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
20467 CTCAAAACAGAAGATTTTATATCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
20506 CTCGAAAC---ATATTTTATCTCACTTAAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** *
20542 ATTTAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
20581 GTCGAAACATAAGATTTTGTCTCGCTTGAAATAGTTTAC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
20620 CTCGAAACAAAAGATTTTGTCTCGCTTAAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
20659 CTCGAAACAGAAGATTTTTTCTTGCATAAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
20698 CTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
20737 ATCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
20776 AT-GAAACAGAATATTTTATCTCGGTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
20814 CTTGAAACAGAAAATTTTATCGCGCTTGAGATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
20853 ATCGAAATAGATGATTTTGTCTCACTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
20892 CTCAAAATAGAAGATTTTGTC-CTGCTTTAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTC-GCTTGAGATAGTTTCC
* *
20931 CTCGTAACAGAAGATTTTATCTTC-CTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATC-TCGCTTGAGATAGTTTCC
* * *
20970 ATCTAAACAGAAGATTTTATCTCGATTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
21009 CAT-GAAACAGAATATTTTATTTCGCTTGAGATATTTTCT
1 C-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
21048 CTCGAAACAGAAGATTTTATCTAGCTTGAGATATTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
21087 CTTGAAACATAAGATTTTACCTCCCTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
21126 CTTGAAACAAAACATTTTATCTCAG-TTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTC-GCTTGAGATAGTTTCC
* **** * **** **
21165 CTTGGTTGAGATAG-TTTT-CCTCGAAACAGA-AGATTTTAT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCC
* **** **** * * **
21204 GTCGCTTGAGATAG-TTTT-TCTCGAAACAGAAATTTTTT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAGTTTCC
*** * *** ** * **
21242 CTCGCTTCATATAGATTCCGTCGAAGC-AGAAGAT--TTTGT
1 CTCGAAACAGA-AGATTTTATC-TCGCTTG-AGATAGTTTCC
**** ** ****
21281 CTCGCTTGAGATAG--TTTCCCTCGAAACAGA-AGATTATGCC
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG-TT-T-CC
** ** **** * * **
21321 TCTC-TTA-AGATAG--TTTCCCTCGAAACAGAAAATTTTGT
1 -CTCGAAACAGA-AGATTTTATCTCGCTTGAG-ATAGTTTCC
**** ** **** **
21359 CTCGCTTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTTT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCC
* **** **
21398 CTCG---CTTG-AGATTGTT-TCCCTCGAAACAGA-AGATTTTTT
1 CTCGAAAC-AGAAGATT-TTAT--CTCGCTTGAGATAG--TTTCC
* **** ** * **** **
21437 CTTGCTTGAGATAG-TTTCCT-TAGAAACAGA-AGATTTTAT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCC
**** * * ** ** **
21476 CTCGCTTGAGATG-GTTTCCCTCGAAAT-AGA-AGATTTTTT
1 CTCGAAACAGAAGATTTTATCTCG-CTTGAGATAG--TTTCC
**** ** *** **
21515 CTCGCTTGAGATAG--TTTCCCTCAAAAT-AGA-AGATCTTAT
1 CTCGAAACAGA-AGATTTTATCTC-GCTTGAGATAG-T-TTCC
* **** ** **** **
21554 ATCGCTTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTAT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCC
** * * *** **
21593 CTCGCTAGAGATAG--TTT-CCTACGAAACAAAAGAT--TTTAT
1 CTCGAAACAGA-AGATTTTATCT-CG---CTTGAGATAGTTTCC
**** * * ** ** **
21632 CTCGCTTGA-AATAGTTTCCCTCGAAAT-AGA-AGATTTTAT
1 CTCGAAACAGAAGATTTTATCTCG-CTTGAGATAG--TTTCC
* **** ** **** **
21671 TTCGCTTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTGT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCC
**** ** * ** **
21710 CTCGCTTGAGATA-A-TTTCCCTAGAAAT-AGA-AGATTTTAT
1 CTCGAAACAGA-AGATTTTATCTCG-CTTGAGATAG--TTTCC
**** ** **** **
21749 CTCGCTTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTTT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCC
**** * ** **** **
21788 CTCGTTTGAG-ATATTTTCCCTCGAAACAGA-AGATTTTTT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAG--TTTCC
**** ** * * * **
21827 CTCGCTTGAGATAG-TTTCCT-TTGAAACATAAGAT--TTTAT
1 CTCGAAACAGA-AGATTTTATCTCG---CTTGAGATAGTTTCC
* **** ** * **** * * **
21866 CTTGCTTGAGATAG-TTTCCT-TTGAAACAAAATATTTTAT
1 CTCGAAACAGA-AGATTTTATCTCG-CTTGAGATAGTTTCC
* **** **
21905 CTCGTTAA-AGATAG-TTTTA-CTCGAAACAGA-AGATTTTGT
1 CTCG-AAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCC
**** * * * *** **
21944 CTCGCTTGAGATG-GTTTCTCTCAAAAT-AGA-AGATTTTGT
1 CTCGAAACAGAAGATTTTATCTC-GCTTGAGATAG--TTTCC
* * * * *** * **
21983 CTC---ACTTG-AGATAGTT-TCCCTCAAAACATATGATTTTAT
1 CTCGAAAC-AGAAGAT-TTTATCTCGCTTGAGATA-G--TTTCC
***** * * ** *** **
22022 CTCCTTTGAG-ATACTTTCCCTCGAAACAAAAGAT--TTTAT
1 CTCGAAACAGAAGATTTTATCTCG---CTTGAGATAGTTTCC
**** * *** * * **
22061 CTCGCTTGAGATAG--TTT-CCTAAATAGA-ATATATTTAA
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATA-GTTTCC
**** * ** *
22098 CTCGCTTGAGATAG--TTTCTCTCGAAAT-AGA-AGATTTTTC
1 CTCGAAACAGA-AGATTTTATCTCG-CTTGAGATAG--TTTCC
** * * *** * * **
22137 CTCGCTATAGATAG-TTTCACTCTAAATAGA-ATATTTTAT
1 CTCGAAACAGA-AGATTTTA-TCTCGCTTGAGATAGTTTCC
**** ** *** **
22176 CTCGCTTGAGATAG--TTTCCCTCGAAACAAAAGAT--TTTGT
1 CTCGAAACAGA-AGATTTTATCTCG---CTTGAGATAGTTTCC
**** * **** * * **
22215 CTCGCTTGAGATAG--TTT-CCGTCGAAACAGAACATTTTAT
1 CTCGAAACAGA-AGATTTTATC-TCGCTTGAG-ATAGTTTCC
* * * **
22254 CTCG---CTTG-AGA--TTATGTCGCTCGAAACAGA-AGATTTTAT
1 CTCGAAAC-AGAAGATTTTATCTCGCTTG----AGATAG--TTTCC
* *** ** ** **
22293 CTCTATTGAGATAG--TTTCCCTCGAAAT-AGA-AGATTTTAT
1 CTCGAAACAGA-AGATTTTATCTCG-CTTGAGATAG--TTTCC
* * * ** **** * *
22332 CTCG---CTTGATACACTTTCCCTCGAAACA-AAAGATTT-T
1 CTCGAAAC-AGA-AGATTTTATCTCGCTTGAGATAG-TTTCC
*** ** * **** **
22369 CTCG-TTGAGATAG--TTTCCCACGAAACAGA-AGATTTTAT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCC
**** * * * * * *
22407 CTCGCTTGAGATG-GTTT-CCTCGAAAC-AGAAGATTTTGTTTCG
1 CTCGAAACAGAAGATTTTATCTCG---CTTG-AGA--TAGTTTCC
* * * * * *
22449 CTTGAGATAGTTTGAGATTTTTTGCTCACTTGAGATAG-TTCC
1 CTCGAAACAG---AAGATTTTAT-CTCGCTTGAGATAGTTTCC
* **
22491 CTTCGAAACAGAAGATTTTATCTCGTTTGAGATAGTTTTT
1 C-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * **
22531 CTTGAAACAAAATATTTTATCTCGCTAAAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
22570 CTCGAAACAGAAGATTTTGTCTCGCATGAGATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
22609 CTCAAAATAGAATATTTTGTCTTGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
22648 CTCAAAACAGAAGATTTTATCTC-CTTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTTTCC
* * *
22687 CTCGAAACAAAATATTTTATCTCGCTTGAGATAATTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
22726 CAT-GAAACTGAAGATTTTATATCACTTGAGATAGTTTCC
1 C-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
22765 AAT-GAAACAAAATATTTTATCTCGCTTGAGATAGTTTCT
1 -CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
22804 CTCGAAATAGAAGATTTTATATCGCTTGAGATAGTTTGC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * ** *
22843 CTTGAAACAGAATATTTTATCTTACTTGAGATACTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
22882 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
22921 CTTGAAACAGAAGATTTTATCTCGCTTGAGATAGATTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * *
22960 CACGAAACATAAGAATTTATCTTGCTTAAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
22999 CTTGAAACA-AATTATTTTATATAGCTTGAGATAGTTTCC
1 CTCGAAACAGAA-GATTTTATCTCGCTTGAGATAGTTTCC
* * *
23038 CTCGAAACAGAAGATTTTTTCTCTCTTGAGAAAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** *
23077 CTTGAAATTGAAGATTTT-TCTCGCTTAAGAT-GTTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TTTCC
* ** * *
23115 CTCAAAATTGAAGATCTTATATCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
23154 CTCGAAACAGAGGATTTTATCGCGGTTGAGATCGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
23193 CTCG----A-AA-A--TTA---AGCTTGAGATAGTTTTC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
23221 CTCGGAATAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
23260 CTCAAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
23299 CTCGAAACAGAAGATTTTATATCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
23338 CTCAAAATAGATGATTTTATCTCGGTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
23377 CTCGAAACAGAAGATTTTATGTCGCTTGAGATAGTTTTC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
23416 CTCAAAACAGAA-TTTTTTTCTCGCTTGTGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * *
23454 CTCGAAACAGAATAATTTATCTCACTTAAGATATTTTAC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
23493 CTCGAAACAGAAGATTTTTTCTCACTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
23532 CTCGAAACAGAATATTTTATCTCGCTTGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
23570 CTACGAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CT-CGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
23610 CTCGAAACAGAAGGTTTTATCTCGCTTGAGATA-TTTACC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CC
* * * * *
23649 ATAGAAACAAAAGATTTTACCTCTCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
23688 CTTGAAACAAAATATTTTATCTCGGTTGAGATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
** * * *
23727 CTCGAAGTAGAAGATTTTGTCTCACTTGAGATAGTTGCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
23766 CTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGTTGCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
23805 CTAGAAACAGAAGATTTTTTCTCGCTTAAGATTGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
23844 CTCGAAACAGATGATTTTTTCTCGCTTTAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** *
23883 TTCGAAACATTAGATTTTATCTCGCTTGATATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
23922 CTCGAAATAGAAGATTTTTTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
23961 CTCAAAATAGAAG-TCTTATATTGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
23999 CTCGAAACAGAAGATTTTATCTCGCATGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
24037 ATACGAAACAAAAGATTTTATCTCACTTGAGATAGTTTCC
1 CT-CGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
24077 CTCGAAATAGAAGATTTTGTCTCGCTTGTGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
24116 CTCGAAATAGATGATTTTATCTCGCTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
24155 CTC-AAATCTGAAGATTTTGA-CTCGCTTGAGATCGTTTCC
1 CTCGAAA-CAGAAGATTTT-ATCTCGCTTGAGATAGTTTCC
24194 CTCGAAACAGAAGAGTTTT-TCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGA-TTTTATCTCGCTTGAGATAGTTTCC
*
24233 CT-GAAAACAGAAGATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCG-AAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
24272 CTCGAAATAGAAGATTTTACCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
24311 CTTGAAACAAAAGATATTT-TCTCGCTTGAGATATTTTCC
1 CTCGAAACAGAAGAT-TTTATCTCGCTTGAGATAGTTTCC
24350 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * ** *
24389 CTTGAAATAAAATATTTTATCTCGCTAAAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
24428 CTCGAAACAGAAGATTTTGTCTCGCTTGAGATGGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
24467 CTCAAAATAGAAGATTTTGTCGT-GC-TGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATC-TCGCTTGAGATAGTTTCC
* * *
24505 CTCAAAACAGTAGATTTTATCTC-CTTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTTTCC
*
24544 CTCGAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
24583 AAT-GAAACTGAATATTTTATCTCGCTTGAGATAGTTTCC
1 -CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
24622 TTCAAAATATAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
24661 CTCGAAATAGAAGATTTTTTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** * *
24700 CTCAAAATTGAAGATCTTATATCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
24739 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
24778 CTCGAAACAGAAGATCTT-CCTCGCTTGAGATA-TTTACC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CC
* * * *
24816 CTTGAAACAGAAGAATTTACCTCGTTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
24855 CTTGAAACAAAATATTTTATCTCGGTTGGGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
24894 CTCGAAACAGAAGATTTTATGTCGCTTGAGATAGTTTTC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
24933 CTCGAAACAGAAAATTATT-TCTCGCTTTAGATAGATTCC
1 CTCGAAACAGAAGATT-TTATCTCGCTTGAGATAGTTTCC
*
24972 CTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
25011 CTTGAAAAAGAAGATTTTTTCTCGCTTGAGATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
25050 TTCGAAACAGAAGATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * *
25089 CTTGAAACAAAAGATTTTTTCTCTCTTGAGATTGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
25128 CTCGAAATAGAAGATTTTTTCTTGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
25167 TTCGAAACATAAGATTTTATATCGCTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
25206 CTCGAAATAGAAGATTTTTTCTTGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * *
25245 ATCAAAATAGAAGATCTTATATCGCTTGAGATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
25284 CTCGAAACAGAAGATTTTATCTCTCTTGAGATAGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
25322 ATACGAAACAAAAGATTTTATCTCGCTTAAGATAGTTTCC
1 CT-CGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
25362 CTCAAAATAGAAGATTTTGTCTCGCTTGTGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* **
25401 CTCGAAACAGAAGAGTTTATCTCGCTTGAGATAGTTTAT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
25440 CTCGAATCTGAAGATTTTATCTCACTTGAGATCGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
25479 CTCGAAACAGAAGAGTTTT-TCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGA-TTTTATCTCGCTTGAGATAGTTTCC
* *
25518 CT-GAAAACAAAAGATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCG-AAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
25557 CTCGAAATAGAAGATTTTATCTTG-TTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
25595 CTTGAAACAAAAGATTTTTTCTCGCTTGAGATATTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
25634 CTCGAAAAAGAATATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * ** **
25673 CTTGAAACAAAATATTTTATCTCGCTAAAGATAGTTTTA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * **
25712 CTTGAAACAAAAGATTTTGTCTCGCTTGAGAT-GATTTAT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TTTCC
* * * *
25751 CTCAAAATAGAAGATTTTGTCTCACTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
25790 CTCAAAACATATGATTTTATATC-CTTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTTTCC
* * *
25829 CTCGAGACAAAAGATTTTATCTCGCTTGAGATATTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * *
25868 AAT-GAAACTGAAAATTTTATATCGATTGAGATAGTTTCT
1 -CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
25907 CTCGAAATAGAATATTTTTTAC-CGGTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTAT-CTCGCTTGAGATAGTTTCC
* * * * *
25946 CTTGACAA-TGAATATTTTATCTTGCTTGAGATACTTTCC
1 CTCGA-AACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
25985 CTCGAAACAGAAGATTTTATCTCGCTTGAGCTAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
26024 GTTGAAACAGAAGATTTTATCTCGCTTGAGATAGATTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
26063 CACGAAACATAAGATTTTATCTTGCTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
26102 CTTGAAACAAAATATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
26141 CTCGAAACAGAAGATTTTTTCTCGTTTGACATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
26180 CTCGAAACAGATGATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** *
26219 CTTGAAATTGAAGATTTTTTCTCGCTTGAGAT-GTTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TTTCC
* ** * *
26258 AC-CAAAATTGAAGATCTTATATCGCTTGAGATAGTTTCC
1 -CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
26297 CTCGAAAAAGAGGAATTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
26336 CTCGAAA-ATTAAGATTTTATATTGCTTGAGATAGTTTCC
1 CTCGAAACA-GAAGATTTTATCTCGCTTGAGATAGTTTCC
*
26375 CTCGAAACAGAAGATTTTATCTCGCTTAAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
26414 CTCGAAACAGAAGATTTTATCTCGCTTGATATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
26453 CTCGAAACAGAAGATTTTATATCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
26492 CTCGAAATAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
26531 CTCGAAACAGAAGATTTTGTCTTGCATGGGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
** * * *
26570 CTCGAAGTAGAATATTTTGTCTCGCTTGAGATAGGTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
26609 CTCGAAACAGAAGAATTTATCTCACTTAAGATATTTTAC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
26648 CTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
26687 TTCGAAACATAAGATTTTATATCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
** * * * * *
26726 CTTAAAACAGAATATTTTATCTCACTTGAGAAAATTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
26765 CTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
26804 CTCAAAATATAAGATTTTGTCTTC-CTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATC-TCGCTTGAGATAGTTTCC
* * * *
26843 CTCGTAACAGAAGATTTTATCTCCCTTGAGATTGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
26882 ATCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** * *
26921 CAT-GAAACAGAATATTTTATCTTACTTGAGATATTTTCT
1 C-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
26960 CTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
26999 CTTGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * *
27038 TTTGAAACAAAATATTTTATCTCGGTTGAGATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* **** * * * *
27077 CTTGGTTGAGATAG--CTTCTCTCGAAAC-AGAAGATTTTA-TTTCT
1 CTCGAAACAGA-AGATTTTATCTCG---CTTG-AGA---TAGTTTCC
* **** * * * **
27120 CTTG----AGATAG--TTT-TCATCGAAACAAAAATTTTTTT
1 CTCGAAACAGA-AGATTTTATC-TCGCTTGAGATA-GTTTCC
*** ** **** **
27155 CTCGCTTCAGATAGA--TTCCCTCGAAACAGA-AGATTTTTT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCC
* * * * * **
27194 CTTG---CTTG-ATATAGTT-TC-C-CTTGAAACATATGATTTTGT
1 CTCGAAAC-AGAAGAT-TTTATCTCGCTTG--AGATA-G--TTTCC
**** ***** **
27233 CTCGTTTGAGATAG-TTTT-TCTCAAAACAGA-AGATTTTAT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCC
* * * **
27272 CTCG---CTTG-AGATAGTT-TC-C-CTTGAAATAGAAGATTTTGT
1 CTCGAAAC-AGAAGAT-TTTATCTCGCTTGAGAT---AG--TTTCC
**** ** ** **** * **
27311 CTCGCTTGAGATTA-TTTCCCTCGAAACAGAAGAGTTTTT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAG-ATAGTTTCC
**** ** **** **
27350 CTCGCTTGAGATAG-TTTCCT-TCGAAACAGA-AGATTTTAT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCC
** ** * * **
27389 CTCG---C--TTGA--TTCCCTCGAAATATAAGAT--TTTAT
1 CTCGAAACAGAAGATTTTATCTCG--CT-TGAGATAGTTTCC
** ** **** **
27422 CTCG---CTTAAGATAGTTTCCCTCGAAACAGA-AGATTTTAT
1 CTCGAAACAGAAGAT--TTTATCTCGCTTGAGATAG--TTTCC
* * * * **** **
27461 CTCG---CTTGATATAGTTTCTCTCGAAACAGA-AGATTTTAT
1 CTCGAAAC-AGA-AGATTTTATCTCGCTTGAGATAG--TTTCC
* **** ** * * **
27500 ATCGCTTGAGATAG--TTTCCCTCGAAACATAAGAT--TTTAT
1 CTCGAAACAGA-AGATTTTATCTCG---CTTGAGATAGTTTCC
**** ** * **** **
27539 CTCGCTTGAGATAG--TTTCCCTAGAAACAGA-AGATTTTGT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCC
* ***** ** ** * **
27578 CTTGCTTGGGATAG--TTTCCCTCGAAAT-AGAATATTTTGT
1 CTCGAAACAGA-AGATTTTATCTCG-CTTGAG-ATAGTTTCC
**** * ** **** **
27617 CTCGCTTGAGATAG--GTTCCCTCGAAACAGA-AGAATTTAT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCC
* * * **** **
27656 CTC-ACTTA-AG-ATATTTTACCTCGAAACAGA-AGATTTTTT
1 CTCGA--AACAGAAGATTTTATCTCGCTTGAGATAG--TTTCC
**** ** * * * **
27695 CTCGCTTGAGATAG-TTTCCT-TCGAAATAT-A-ACATTTTAT
1 CTCGAAACAGA-AGATTTTATCTCG--CT-TGAGATAGTTTCC
* * * * **
27734 CTCG---CTTG-AGATAGTT-TC-C-CTTAAAACAGAATATTTTAT
1 CTCGAAAC-AGAAGAT-TTTATCTCGCTT----GAG-ATAGTTTCC
*** * * ** * * **
27773 CTC-ACTTGAGAA-AATTTCTCTCGAAAT-AGAAATTTTGT
1 CTCGA-AACAGAAGATTTTATCTCG-CTTGAGATAGTTTCC
**** ** ** * **
27811 CTCGCTTGAGATAG--TTTCCCTCAAAATATAAGAT--TTTGT
1 CTCGAAACAGA-AGATTTTATCTC--GCT-TGAGATAGTTTCC
* **** ** ** **
27850 CTTGCTTGAGATAG--TTTCCCTCG-TAACAGA-AGATTTTAT
1 CTCGAAACAGA-AGATTTTATCTCGCT-TGAGATAG--TTTCC
* * **** **
27889 CTC---CCTTG-AGATTGTT-TCAATCGAAACAGA-AGATTTTAT
1 CTCGAAAC-AGAAGATT-TTATC--TCGCTTGAGATAG--TTTCC
**** ** **** * **
27928 CTCGCTTGAGATAG--TTTCCCAT-GAAACAGAATATTTTAT
1 CTCGAAACAGA-AGATTTTATC-TCGCTTGAG-ATAGTTTCC
* **** * * **** **
27967 CTTGCTTGAG-ATATTTTCTCTCGAAACAGA-AGATTTTAT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAG--TTTCC
**** * * * **** *
28006 CTCGCTTGAG-ATATTTTCTCTTGAAACAGA-AGATTTTAC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAG--TTTCC
**** ** * **** * **
28045 CTCGCTTGAGATAG-TTTCCT-TTGAAACAAAATA-TTCTAT
1 CTCGAAACAGA-AGATTTTATCTCG-CTTGAGATAGTT-TCC
**** * * *
28084 CTCGGTTGAGATAG--TTTCTCT-G-GTGAGATAGCTTT-T
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG-TTTCC
* * *
28120 CTCGAAACAAAAGATTTTATTTCGCTTGAGATAGTTTTC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
28159 ATCGAAACAGAA-ATTTTTTTCTCGCTTCAGATAGATTCC
1 CTCGAAACAGAAGA-TTTTATCTCGCTTGAGATAGTTTCC
* * *
28198 CTCGAAACAGAAGATTTTTTCTTGCTTGATATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * ** **
28237 CTTGAAACATATGATTTTGTCTCATTTGAGATAGTTTTT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
28276 CTCAAAACAAAAGATTTTATCTC-CATTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTTTCC
*
28315 CTCGAAACAGAAGATTTTGTCTCGCTT--G--A--TTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
28348 CTCGAAATATAAGATTTTATCTCGCTTAAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
28387 CTCGAAACAGAAGATTTTATCTCGCTTGATATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
28426 CTCGAAACAGAAGATTTTATATCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
28465 CTCGAAACATAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
28504 CTCGAAACAGAAGATTTTGTCTTGCTTGGGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
28543 CTCGAAACAGAAGATTTTGTCTCGCATGAGATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * *
28582 CACAAAATAGAATATTTTGTCTTGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
28621 CTCAAAACAGAAGATTTTATCTC-CTTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTTTCC
* * *
28660 CTCGAAACAAAATATTTTATCTCGCTTGAGATAGTTACC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * * *
28699 TTTGAAACAAAATATTTTATCTCG-TTAAAGATAGTTAT-A
1 CTCGAAACAGAAGATTTTATCTCGCTT-GAGATAGTT-TCC
* * *
28738 CTCGAAACAGAAGATTTTGTCTCGCTTGAGATGGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
28777 CTCAAAATAGAAGATTTTGTCTCACTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
28816 CTCAAAACATATGATTTTATCTC-CTTTGAGATACTTTCC
1 CTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTTTCC
*
28855 CTCGAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
28894 CT-AAAATAGAATATATTTAACTCGCTTGAGATAGTTTCT
1 CTCGAAACAGAAGAT-TTTATCTCGCTTGAGATAGTTTCC
* ** *
28933 CTCGAAATAGAAGATTTTGCCTCGCTAT-AGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCT-TGAGATAGTTTCC
* * *
28972 CTCTAAATAGAATATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
29011 CTCGAAACAAAAGATTTTGTCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
29050 GTCGAAACAGAACATTTTATCTCGCTTGAGATTA-TGTCG
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGA-TAGTTTCC
**
29089 CTCGAAACAGAAGATTTTATCTCTATTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
29128 CTCGAAATAGAAGATTTTATCTCGCTTGATACACTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
29167 CTCGAAACAAAAGATTTTCTCTCGTTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
29206 CACGAAACAGAAGATTTTATCTCGCTTGAGATGGTTT-C
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
29244 CTCGAAACAGAAGATTTTGTTTCGCTTGAGATAG-TT--
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
29280 -T-------G-AGATTTTTTGCTCACTTGAGATAG-TTCC
1 CTCGAAACAGAAGATTTTAT-CTCGCTTGAGATAGTTTCC
* **
29310 CTTCGAAACAGAAGATTTTATCTCGTTTGAGATAGTTTTT
1 C-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * **
29350 CTTGAAACAAAATATTTTATCTCGCTAAAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
29389 CTCGAAACAGAAGATTTTGTCTCGCATGAGATAGTTTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
29428 CTCAAAATAGAATATTTTGTCTTGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
29467 CTCAAAACAGAAGATTTTATCTC-CTTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTTTCC
* * *
29506 CTCGAAACAAAATATTTTATCTCGCTTGAGATAATTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
29545 CAT-GAAACTGAAGATTTTA--TCACTTGAGATAGTTTCC
1 C-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
29582 AAT-GAAACAAAATATTTTATCTCGCTTGAGATAGTTTCT
1 -CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * *
29621 CTCGAAATAGAAGATTTTATATCGCTTGAGATAGTTTGC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * ** *
29660 CTTGAAACAGAATATTTTATCTTACTTGAGATACTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
29699 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
29738 CTTGAAACAGAAGATTTTATCTCGCTTGAGATAGATTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * * *
29777 CACGAAACATAAGAATTTATCTTGCTTGAGATAGTTTCA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
29816 CTTGAAACA-AATTATTTTATATAGCTTGAGATAGTTTCC
1 CTCGAAACAGAA-GATTTTATCTCGCTTGAGATAGTTTCC
* * *
29855 CTCGAAACAGAAGATTTTTTCTCTCTTGAGAAAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* ** *
29894 CTTGAAATTGAAGATTTT-TCTCGCTTAAGAT-GTTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TTTCC
* ** * *
29932 CTCAAAATTGAAGATCTTATATCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
29971 CTCGAAACAGAGGATTTTATCGCGGTTGAGATCGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
30010 CTCGAAA-ATTAAGATTTTATATTGCTTGAGATAGTTTTC
1 CTCGAAACA-GAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
30049 CTCGGAATAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
30088 CTCAAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
*
30127 CTCGAAACAGAAGATTTTATATCGCTTGAGATAGTTTCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
* * * *
30166 CTCAAAATAGATGATTTTATCTCGGTTGAGATAGTTTC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTC
30204 TCTTGGTTGA
Statistics
Matches: 24426, Mismatches: 4166, Indels: 3119
0.77 0.13 0.10
Matches are distributed among these distances:
27 20 0.00
28 49 0.00
29 19 0.00
30 53 0.00
31 77 0.00
32 129 0.01
33 312 0.01
34 339 0.01
35 658 0.03
36 1345 0.06
37 1859 0.08
38 2837 0.12
39 15866 0.65
40 468 0.02
41 154 0.01
42 75 0.00
43 58 0.00
44 18 0.00
45 11 0.00
46 7 0.00
47 32 0.00
48 12 0.00
49 4 0.00
50 9 0.00
53 1 0.00
54 5 0.00
55 1 0.00
56 8 0.00
ACGTcount: A:0.29, C:0.18, G:0.16, T:0.37
Consensus pattern (39 bp):
CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
Found at i:243 original size:67 final size:65
Alignment explanation
Indices: 141--271 Score: 181
Period size: 67 Copynumber: 2.0 Consensus size: 65
131 ACGAAACAGA
* * * * *
141 AGATTTTATCTCGCTTGAGATGGTTTCCTCGAAACAGAAGATTTTGTTTCGCTTGAGATAGTTTG
1 AGATTTTATCTCACTTGAGATAGTTACCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTG
* *
206 AGATTTTTTGCTCACTTGAGATAGTTACCTTCGAAACAGAAGATTTTATCTCGTTTGAGATAGTT
1 AGATTTTAT-CTCACTTGAGATAGTTACC-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
271 T
64 T
272 TTCTTGAAAC
Statistics
Matches: 57, Mismatches: 7, Indels: 2
0.86 0.11 0.03
Matches are distributed among these distances:
65 8 0.14
66 16 0.28
67 33 0.58
ACGTcount: A:0.25, C:0.14, G:0.21, T:0.40
Consensus pattern (65 bp):
AGATTTTATCTCACTTGAGATAGTTACCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTG
Found at i:429 original size:117 final size:117
Alignment explanation
Indices: 206--30203 Score: 21828
Period size: 117 Copynumber: 260.9 Consensus size: 117
196 AGATAGTTTG
* * * * *
206 AGATTTTTTGCTCACTTGAGATAGTTACCTTCGAAACAGAAGATTTTATCTCGTTTGAGATAGTT
1 AGATTTTAT-CTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
** * * * **
271 TTTCTTGAAACAAAATATTTTATCTCGCTAAAGATAGTTTCCCTCGAAACAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * *
324 AGATTTTATCTCGCATGAGATAGTTTCTCTCAAAATAGAATATTTTGTCTTGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
389 CCCTCGAAACAAAATATTTTATCTCGCTTGAGATAATTTCCCAT-GAAACTGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCC-TCGAAACAGA
* * * * *
441 AGATTTTATATCGATTGAGATAGTTTCCAAT-GAAACAAAATATTTTATCTCGCTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCC-CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * * *
505 TCTCTCGAAATAGAAGATTTTATATCGCTTGAGATAGTTTGCCTTGAAACAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
558 ATATTTTATCTCACTTGAGATACTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGGTAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
623 CCCTTGAAACAGAAGATTTTATCTCGCTTGAGATAGATTCCCACGAAACATA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * * *
675 AGAATTTATCTTGCTTGAGATAGTTTCACTTGAAACA-AATTATTTTATATAGCTTGTGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAA-GATTTTATCTCGCTTGAGATAGTT
* * * * * **
739 TGCCTCGAAACAGAAGATTTTTTCTCTCTTGAGAAAGTTTCCCTTGAAATTGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * ** * *
792 AGATTTTTTCTCGCTTAAGAT-GTTTTCCCTCAAAATTGAAGATCTTATATCGCTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAG-TTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * * *
856 TCCCTCGAAACAGATGATTTTATCGCGGTTGAGATCGTTTCCCTCGAAA-ATTA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACA-GA
* * * *
909 AGATTTTATATCGCTTGAGATAGTTTTCCTCGGAATAGAAGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * ** *
974 CCCTCAAAACAGAAGATTTTATCTCGCTTAAGATAGTTTCCCTTAAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
1026 TGATTTTATCTCGGTTGAGATAGTTTCCCTCGAAACATAACATTTTATGTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
1091 TCCTCGAAACAGAAAATTATT-TCTCGCTTCAGATAGATTCCCTCGAAACAGA
66 CCCTCGAAACAGAAGATT-TTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
1143 AGATTTTTTCTCGCTTGAGATAGTTTCCCTTGAAACAGAAGATTTTTTCTCGCTTTAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* ** * * * *
1208 CTCTCGAAGTAGAAGATTTTGTCTCACTTGAGATAGTTGCCCTCGAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
1260 AGATTTTGTCTCGCTTGAGATAGTTGCCCTCGAAACAGAAGATTTTTTCTCGCTTAAGATTGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * **
1325 CACTCGAAACAGAAGATTTTTTCTCGCTTTAGATAGTTTCCTTCGAAACATT
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
1377 AGATTTTATCTCGCTTGATATAGTTTCCCTCGAAATAGAAGATTTTTTCTCGCTTGAGATAATTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * * *
1442 CCCTCAAAATAGAAG-TCTTATATTGATTGAGATAGTTTCCCTCGAAACATA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
1493 AGATTTTATCTCGCATGAGATAGTTT-CATACGAAACAAAAGATTTTATCTCACTTGAGATAATT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCT-CGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * *
1557 TCCCTCGAAATAGAAGATTTTGTCTC-CTTGTGATAGTTTCCCTCGAAATAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
1609 TGATTTTATCTCGCTTGAGATAGTTTCACTC-AAATCTGAAGATTTTGA-CTCGCTTGAGATCGT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAA-CAGAAGATTTT-ATCTCGCTTGAGATAGT
**
1672 TTCCCTCGAAACAGAAGAGTTTT-TCTCGCTTGAGATAGTTTCCCTAAAAACAGA
64 TTCCCTCGAAACAGAAGA-TTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
1726 AGATTTTGTCTCGCTTGAGATAGTTTCCCTCGAAATAGAAGATTTTACCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
1791 CCCTTGAAACAAAAGATTTTTTCTCGCTTGAGATATTTTCCCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * **
1843 AGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAATAAAATATTTTATCTCGCTAAAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * *
1908 CACTCGAAACAGAAGATTTTGTCTCGCTTGAGATGGTTTCTCTCAAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
1960 AGATTTTATCGT-GCCTAAGATAGTTTCCCTCAAAACAGTAGATTTTATCTC-CTTTGAGATAGT
1 AGATTTTATC-TCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGT
* * * *
2023 TTCACTCGAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCCAAT-GAAACTGA
64 TTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC-CTCGAAACAGA
* * * * *
2077 ATATTTTATCTCGCTTGAGATAGTTTCCTTCAAAATATAAGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * **
2142 CCCTCGAAATAGAAGATTTTTTCTCGCTTGAGATAGTCTCCCTCAAAATTGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* *
2194 AGATCTTATATCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* *
2259 CCCTCGAAACAGAAGATTTT-CCTCGCTTGAGATA-TTTACCCTTGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CCCTCGAAACAGA
* * * * * * * *
2310 AGAATTTACCTCGTTTGAGATAGTTTCCCTTGAAACAAAATATTTTATCTCGGTTGGGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
2375 CCCTCGAAACAGAAGATTTTATGTCTCTTGAGATAGTTTTCCTCGAAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCG-AAACAGA
* * * *
2428 AAATTATT-TCTCGCTTCAGATAGATTCCCTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTT
1 AGATT-TTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * * **
2492 TCCCTTGAAACAGAAGATTTTTTCTCGCTTTAGATAGTTTCTCTCGAAGTAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
2545 AGATTTTGTCTCACTTGAGATAGTTGCCCTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGTTG
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * *
2610 CCCTCGATACAGAAGATTTTTTCTCGCTTAAGATTGTTTCACTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * ** *
2662 AGATTTTTTCTCGCTTTAGATAGTTTCCTTCGAAACATTAGATTTTATCTCGCTTGATATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * *
2727 CCCTCGAAATAGAAGATTTTTTCTCGCTTGAGATAATTTCCCTCAAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
2779 AG-TCTTATATTGATTGAGATAGTTTCCCTCGAAACATAAGATTTTATCTCGCATGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
2843 -CATACGAAACAAAAGATTTTATCTCACTTGAGATAGTTTCCCTCGAAATAGA
66 CCCT-CGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
2895 AGATTTTGTCTC-CTTGTGATAGTTTCCCTCGAAATAGATGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
2959 CACTC-AAATCTGAAGATTTTGA-CTCGCTTGAGATCGTTTCCCTCGAAACAGA
66 CCCTCGAAA-CAGAAGATTTT-ATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
** *
3011 AGAGTTTT-TCTCGCTTGAGATAGTTTCCCTAAAAACAGAAGATTTTGTCTCGCTTGAGATAGTT
1 AGA-TTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * *
3075 TCCCTCGAAATAGAAGATTTTACCTCGCTTGAGATAGTTTCCCTTGAAACAAA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
3128 AGATTTTTTCTCGCTTGAGATATTTTCACTCGAAAAAGAATATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * ** ** *
3193 CCCTTGAAACAAAATATTTTATCTCGCTAAAGATAGTTTTACTTGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* ** * * * *
3245 AGATTTTGTCTCGCTTGAGAT-GATTTATCTCAAAATAGAAGATTTTGTCTCACTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAG-TTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * * * *
3309 TCCCTCAAAACATATGATTTTATATC-CTTTGAGATAGTTTCCCTCGAGACAAA
65 TCCCTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
3362 AGATTTTATCTCGCTTGAGATATTTTCCAAT-GAAA-TGAAAATTTTA--TCGATTGAGACAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCC-CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * * * * *
3423 TCTCTCGAAATAGAATATTTT-T-ACGGTTGAGATAGTTTCCCTTGACAA-TGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGA-AACAGA
* * * *
3474 ATA-TTTATCTTGCTTGAGATACTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGCTAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * *
3538 CCGTTGAAACAGAAGATTTTATCTCGCTTGAGATAGATTCCCACGAAACATA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
3590 AGATTTTATCTTGCTTGAGATAGTTTCACTTGAAACAAAATATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
*
3655 CCCTCGAAACAGAAGATTTT-TCTC-CTTTGACATAGTTTCCCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTTTCCCTCGAAACAGA
* * * **
3706 TGATTTTGTCTCGCTTGAGATAGTTTCCCTTGAAATTGAAGATTTT-TCT--CTTGAGAT-GTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TT
* ** * * *
3767 TCCAC-CAAAATTGAAGATCTTATATCGCTTGAGATAGTTTCCCTCGAAAAAGA
65 TCC-CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
3820 GGATTTTATCTCGCTTGAGATCGTTTCCCTCAAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
3885 CCCTCAAAATAGATGATTTTATCTCGGTTGAGATAGTTTCCCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
3937 AGATTTTATGTCGCTTGAGATAGTTTTCCTCAAAACAGAA-ATTTTTTCTCGCTTGTGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * *
4001 CCCTCG-AA-A-AAGAATTTATCTCACTTAAGATATTTTACCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* *
4050 AGATTTTTTCTCGCTTGAGATAGTTTCCCTCGAAACAGAATATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
*
4115 -CCTACGAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
66 CCCT-CGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
4167 AGATTTTATCTCGCTTGAGATA-TTTACCATAGAAACAAAAGATTTTACCTCTCTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTT-CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * * *
4231 TCCCTTGAAACAAAATATTTTATCTCGGTTGAGATAGTTTCCCTCGAAACATA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
4284 ACATTTTATGTCGCTTGAGATAGTTTTCCTCGAAACAGAAAATTATT-TCTCGCTTCAGATAGAT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATT-TTATCTCGCTTGAGATAGTT
4348 TCCCTCG-AACAGAAGA-TTT-TCTCGCTTGAGATAGTTTCCCT-GAAACAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * *
4397 AGATTTTTTCTCGCTTTAGATAGTTTCTCTCG--A-AGTAGA-TTT-TGTCACTTGAGATAGTTG
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
4457 CCCTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGTTGCCCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
4509 AGATTTTTTCTCGCTTAAGATTGTTTCACTCGAAACA-AAGATTTTTTCTCGCTTTAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* ** * *
4573 CCTTCGAAACATTAGATTTTATCTCGCTTGATATAGTTTCCCTCGAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * **
4625 AGATTTTTTCTCGCTTGAGATAATTTCCCTCAAAATAGAAG-TCTTATATTTCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
4689 CCCTCGAAACAGAAGA-TTTATCT--CATGAGATAGTTT-CATACGAAACAAA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCT-CGAAACAGA
* * * *
4738 AGATTTTATCTCACTTGAGATAGTTTCCCTCGAAATAGAAGATTTTGTCTC-CTTGTGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
4802 CCCTCGAAATAGATGATTTTATCTCGCTTGAGATAGTTTCACTC-AAATCTGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAA-CAGA
*
4854 AGATTTTGA-CTCGCTTGAGATCGTTTCCCTCGAAACAGAAGATTTT-TCT-GCTTGAGATAGTT
1 AGATTTT-ATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
** * *
4916 TCCCTAAAAACAGAAGATTTTGTCTCGCTTGAGATAGTTTCCCTCGAAATAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
4969 AGATTTTACCTCGCTTGAGATAGTTTCCCTTGAAACAAAAGATTTTTTCTCGCCTGAGATATTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
5034 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAATAAA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* ** * * *
5086 ATATTTTATCTCGCTAAAGATAGTTTCACTCGAAACAGAAGATTTTGTCTCGCTTGAGATGGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * * * *
5151 CTCTCAAAATAGAAGATTTTGTCGT-GCCTAAGATAGTTTCCCTCAAAACAGT
66 CCCTCGAAACAGAAGATTTTATC-TCGCTTGAGATAGTTTCCCTCGAAACAGA
* *
5203 AGATTTTATCTC-CTTTGAGATAGTTTCACTCGAAACAAAAGATTTTATCTCGCTTGAGATAGTT
1 AGATTTTATCTCGC-TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * * *
5267 TCCTTCAAAATATAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAATAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * ** *
5320 AGATTTTTTCTCGCTTGAGATAGTCTCCCTCAAAATTGAAGA-TTTATATCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
5384 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
5436 AGATTTT-CCTCGCTTGAGATA-TTTACCCTTGAAACAGAAGATTTTACCTCGTTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTT-CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * * *
5499 TCCCTTG-AACAAAATATTTTAT-TCGGTTGGGATAGTTTCCCTCGAAACAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * *
5550 AGATTTTATGTCTCTTGAGATAGTTTTCCTCAAAACAGAAAATTATT-TCTCGCTTCAGATAGAT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATT-TTATCTCGCTTGAGATAGTT
* * *
5614 TCCCTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTTCCCTTGAAAAAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
5667 AGATTTTTTCTCGCTTGAGATAGTTTCTCTCGAAACAGAAGATTTTGTCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * *
5732 CCCTCGAAACAGAAGATTTTTTCTCTCTTGAGATTGTTTCACTCGAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
5784 ACATTTTTTCTTGCTTGAGATAGTTTCCTTCGAAACATAAGA-TTTATATCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * *
5848 -CCTCGAAATAGAA-TTTTTTTCTCGCTTGAGATAGTTTCCCTCAAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
5898 AGATCTTATATCGCTTGAGATAGTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
5963 -CATACGAAACCA-AAGATTTTATCTCGCTTAAGATAGTTTCCCTCAAAATAGA
66 CCCT-CGAAA-CAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
6015 AGATTTTGTCTCGCTTGTGATAGTTTCCCTCGAAACAGAAGAGTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
** * * * * * *
6080 ATCTCGAATCTGAAGATTTTGTCTCACTTGAGATCGTTTCCCTCGAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
6132 AGATTTTATCTTG-TTGAGATAGTTTCCCTTGAAACAAAAGATTTTTTCTCGCTTGAGATATTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * *
6196 CACTCGAAAAAGAATATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAAA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* ** * * *
6248 ATATTTTATCTCGCTAAAGATAGTTT-ACTTGAAACAGAAGATTTTGTCTCGCTTGAGAT-GATT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TT
** * * * * *
6311 TATCTCAAAATAGAAGATTTTGTCTCACTTGAGATAGTTTCCCTC-AAA-ACA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
6362 TGA-TTTATATC-CTT-TGATAGTTTCCCTCGAGACA-AAGATTTTATCTCGCTTGAGATA-TTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * * *
6422 CCAAT-GAAACTGAA-AATTTAT-ACGATTGAGATAGTTTCTCTCGAAATAGA
66 CC-CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
6472 ATATTTT-TAC-CG-TTGAGATAGTTTCCCTTGACAA-TGAATATTTTATCT-GCTTGAGATACT
1 AGATTTTAT-CTCGCTTGAGATAGTTTCCCTCGA-AACAGAAGATTTTATCTCGCTTGAGATAGT
* * *
6532 TTCCCTCGAAAACAGAAGATTTTATCTCGCTTGAGCTAGTTTCCGTTGAAACAGA
64 TTCCCTCG-AAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* *
6587 AGATTTTATCTCGCTTGAGATATGATTCCCACGAAACA-AAGATTTTATCT-GCTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATA-GTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * *
6650 TCACTTGAAACA-AATATTTTATCTCGCTTGAGATAGTTTCCCTCAAAACAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
6702 AGATTTTTTCTCG-TT--GATAGTTTCCCTCGAAACAGATGATTTTGTCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* ** * *
6764 CCCTTGAAATTGAAGATTTT-TCTCGCTTGAGAT-GTTTTCCAC-AAA-ATGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACA-GA
* * * *
6813 AGA-TTTATATCGCTTGAGATAGTTTCCCTCGAAAAAGAGGATTTTATCTCGCTTGAGATCGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * *
6877 CCCTCGAAA-ATTAAGATTTTATATTGCTTGAGATAATTTTCCTCGGAACAGA
66 CCCTCGAAACA-GAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
*
6929 AGATTTTA-CTCGCTT-AGGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGATATAGTT
1 AGATTTTATCTCGCTTGA-GATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * *
6992 TCTCTCGAAACAGAAGATTTTATATCGCTTGAGATAGTTTCCTTCGAAATAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
7045 AGATTTTGTCTCGCTTGATATAGTTTCCCTCGAAACAGAAGATTTTGTCTTGCATGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
** * * * *
7110 CCCTCGAAGTAG-A-ATATTGTCT-GCTTGAGATAGGTTCCCGCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
7159 AGAATTTATCTCACTTAAGATATTTTACCTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * **
7224 CCTTCGAAATATAACATTTTATCTCGCTTGAGATAGTTTCCCTTAAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * * *
7276 ATATTTTATCTCACTTGAGAAAATTTCTCTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGCTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * *
7341 CCCTCAAAATATAAGATTTTGTCTTC-CTTGAGATAGTTTCCCTCGTAACAGA
66 CCCTCGAAACAGAAGATTTTATC-TCGCTTGAGATAGTTTCCCTCGAAACAGA
* * **
7393 AGATTTTATCTCCCTTGAGATTGTTTCAATCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
7458 CCCAT-GAAACAGAATATTTTATCTTGCTTGAGATA-TTT-TCTCGAAACAGA
66 CCC-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
7508 AGATTTTA--TCGCTT--GATA-TTTCTCTTGAAACAGAAGATTTTACCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * * * ****
7568 CCTTTGAAACAAAATATTTTATCTCGGTTGAGATAGTTTCTCTTGGTTGAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * **** *** **** **** *
7620 TAG--CTTCTCTCGAAACAGA-AGATTTTATTTCGCTTGAGATAG--TTT-TCATCGAAACAGAA
1 -AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTATC-TCGCTTGAGAT
* ** *** ** **** ** * *
7679 ATTTTTTTCTCGCTTCAGATAGA--TTCCCTCGAAACAGA-AGATTTTTTCTTG---CTTG-
61 A-GTTTCCCTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGAAAC-AGA
* * * ** *** * *** *
7734 ATATAGTT-TC-C-CTTGAAACATATGATTTTGTCTC-ATTTGAGATAG-TTTTCTCAAAC-AGA
1 AGAT-TTTATCTCGCTTG--AGATA-G--TTTCCCTCGA-AACAGA-AGATTTTATCTCGCTTG-
** **** ** ** ** ****
7793 AGAT--TTTATCTCGCTTGAGATAG--TTTCCCTCGAAAT-AGA-AGATTTTGGCTCGCTTGAGA
57 AGATAGTTTCCCTCGAAACAGA-AGATTTTATCTCG-CTTGAGATAG--TTTCCCTCGAAACAGA
** ** **** * ** **** ** *
7852 TTA-TTTCCCTCGAAACAGAAGAGTTTTTCTCGCTTGAGATAG-TTTCCT-TCGAAAC-AGAAGA
1 AGATTTTATCTCGCTTGAG-ATAGTTTCCCTCGAAACAGA-AGATTTTATCTCG---CTTG-AGA
* * *
7913 TTTTATCTCGCTTGATTCCCTCGAAATATAAGATTTTATCTCGCTTAAGATAGTTTCCCTCGAAA
60 ---TA----G--T--TTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAA
7978 CAGA
114 CAGA
* * * *
7982 AGATTTTATCTCGCTTGATATAGTTTCTCTCGAAACAGATGATTTTATATCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
8047 CCCTCAAAACATAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * * *
8099 AGATTTTGTCTTGCTTGGGATAGTTTCCCTCGAAATAGAATATTTTGTCTTGCTTGAGATAGGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
8164 CCCTCGAAACAGAAGA-TTTA--TCACTTAAGAT--TTTACCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
8211 AGATTTT-TCTCGCTTGAGATAGTTTCCTTCGAAATATAACATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
** * * * * * * * *
8275 CCCTTAAAATAGAATATTTTATCTCACTTGAGAAAATTTCTCTCGGAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * *
8327 AAATTTTGTCTCGCTTGAGATAGTTTCCCTCAAAATATAAGATTTTGTCTTGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * **
8392 CCCTCGTAACAGAAGATTTTATCTC-CATTGAGATTGTTTCAATCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTTTCCCTCGAAACAGA
* *
8444 AGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACA-AATATTTTATCT-GCTTGAGATATTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCC-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* *
8506 TCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATA-TTT--CTTGAAACAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
8556 AGATTTTTACCTCGCTTGAGATAGTTTCCTTTGAAA-AAAATATTCTATCTGAGATTTTCTCG-T
1 AGA-TTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGA-T-T-T-T---A---TCTCGCT
* * *
8619 TGAGATAGTTT--CTCGAAACAAAAGATTTTAT-TCGCTTGAGATAGTTTTCATCGAAACA-A
55 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * * *
8678 AAATTTTTTTCTCGCTTCAGATAGATTCCCTCGAAACAGAAGATTTTTTGTTGCTTGATATAGTT
1 AGA-TTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * * ** ** *
8743 TCCCTTGAAACATATGATTTTGTCTCATTTGAGATAGTTTTTCTCAAAACAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
8796 ATATTTTATCTCCCTTGAGATAGTTTCCCTCGAAACAGAAGA-TTTGTCTCGCTTGAGATTA-TT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGA-TAGTT
* *
8859 TCCCTCGAAATAGAAGATTTT-TCTCGCTTGAGATAGTTTCCTTCGAAACAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
8911 AGATTTTATCTCGCTT--G--A--TTCCCTCGAAATA-TAGATTTTATCTCGCTTAAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
8969 CCCTCGAAACAGAAGATTTTATCTCGCTTGATATAGTTTCTCTCG-AATAG-
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* *
9019 AGATTTTATATCGCTTGAGGTAGTTTCCCTCGAAACAGAAGATTTTA-CTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
9083 -CCTCGAAAC-GAAGA-TTTGTCTTGCTTGGGATAGTTTCCCTCGAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * *
9132 ATA-TTT-TGTCGCTTGAGATAGGTTCCCTCGAAACAGAAGAATTTATCTCACTTAAGATATTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * *
9195 ACCTCAAAACAGAAGATTTTTTCTCGCTTGAGATAGTTTCCTTCGAAATATA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* ** * * *
9247 ACA-TTTATCTCGCTTGAGATAGTTTCCCTTAAAACAGAATA-TTTATCTCACTTGAGA-AATTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * *
9309 CTCTCG-AATAGAAGA-TTTGTCTCGCTTGAGATAGTTTCCCTCAAAATATA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
9359 AGATTTTGTCT-GCTTGAGATAGTTTCCCTCGTAACAGAAGATTTTATCTCCCTTGAGATTGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
** *
9423 CAATCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCAT-GAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
9474 ATATTTTATCT-GCTTGAGATATTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGAT--TTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
9536 CTCTTGAAACAGAAGATTTTA-CTCGCTTGAGATAGTTT-CCTTGAAACAAA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * **** * ****
9586 ATATTCTATCTCGGTTGATATAGTTTCTCTTGGTTGAGATAG--CTT-TCTCGAAACAGA-AGAT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG-T
*** **** **** * *** * *
9647 TTTATTCGCTTGAGATAG--TTT-TCATCGAAACAGA-AATTTTTTTCGCATCAGA
64 TTCCCTCGAAACAGA-AGATTTTATC-TCGCTTGAGATAGTTTCCCTCGAAACAGA
** **** ** * *** * * *
9699 TAGA--TTCCCTCGAAACAGA-AGATTTTTCTTG--TTTG-ATATAGTT-TC-C-CTTGAAACAT
1 -AGATTTTATCTCGCTTGAGATAG-TTTCCCTCGAAACAGAAGAT-TTTATCTCGCTTG--AGAT
** *** **** ** ***
9755 ATGATTTTGTCTC--ATTTG-AGATAGTTT-TCTC-AAACAGA-AGATTTATCTC-ACTTGAGA
61 A-G--TTTCCCTCGAAACAGAAGAT--TTTATCTCGCTTGAGATAG-TTTCCCTCGA-AACAGA
* **** * * * ** * ** ***
9812 TAG-TTTCA-CTCGAAACAAAGATTTTGTCTCG---CTTG-AGATTATTCCCTCAAAAT-AGA-A
1 -AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAAC-AGAAGATT-TTATCTC-GCTTGAGATA
** **** ** **** ** *
9869 GATTTTTTCTCGCTTGAGATAG-TTTCCT-TCGAAACAGA-AGATTTTATCTCG---C--T
62 G--TTTCCCTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGAAACAGA
* ** * * ** * * ****
9922 TGA--TTCCCTCGAAATAT-A-ATATTTTATCTCG---CTTGATAG--TTT-CCTCGAAACAGA-
1 AGATTTTATCTCG--CT-TGAGATAGTTTCCCTCGAAAC-AGA-AGATTTTATCTCGCTTGAGAT
** *** * * * **** *** ****
9976 AGATTTTATCTCG--TTTGATATAGTTTCTCTCGAAACAGA-AGATTTTATATCGCTTGAGA
61 AG--TTTCCCTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGAAACAGA
** **** ** **** ** ****
10035 TAG--TTTCCCTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGAAACAGAAT
1 -AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTATCTCGCTTGAG-AT
* ** * * *** ** ** * ** ****
10095 ATTTTGTCTTGCATGGGATAG--TTTCCCTCG-AAGTAGA-ATTTTGTCTCGCTTGAGA
61 AGTTTCCCTCGAAACAGA-AGATTTTATCTCGCTTG-AGATAGTTTCCCTCGAAACAGA
* ** **** ** * * * ****
10150 TAG--GTTCCCTCGAAACAGA-AGAATTTTTCTC-ACTTA-AG-ATATTTTACCTCGAAACAGA-
1 -AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGA--AACAGAAGATTTTATCTCGCTTGAGAT
** **** ** * * * ** *
10208 AGATTTTTCTCGCTTGAGATAG-TTTCCT-TCGAATAT-A-ACATTTTATCTCG---CTTG-
61 AG-TTTCCCTCGAAACAGA-AGATTTTATCTCG-CT-TGAGATAGTTTCCCTCGAAAC-AGA
* * * ** *** * * * *
10262 AGATAGTT-TC-C-CTTAAAACAGAATATTTTATCTC-ACTTGAGAA-AATTTCTCT-GAAATAG
1 AGAT-TTTATCTCGCTT----GAG-ATAGTTTCCCTCGA-AACAGAAGATTTTATCTCG--CTTG
* * * *
10321 AAGAT-TTTATCTCGCTTGAGATAGTTTCCTAAATATAAGATTTTGT-T-GCTTGAGATAG-TTC
57 -AGATAGTT-TC-C-CTCGA-A-A-----C-----AGAAGATTTTATCTCGCTTGAGATAGTTTC
*
10382 CCTC-TAACAGA
106 CCTCGAAACAGA
* **
10393 AGATTTTA--TC-CTTGAGATTGTTTCAATCGAAA-AGAAGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
10454 CCCAT-GAAACAGAATA-TTTATCTTGCTTGAGAT--TTTCTCTCGAAATAGA
66 CCC-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
10503 AGA-TTTGTCTCGCTTGTGATAGTTTCCCTCGAAAATAGATGATTTTATCTCGCTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCG-AAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * *
10567 TCACTC-AATCTGAAGA-TTT-TCTCGCTTGAGATCGTTTCCCTCGAAACAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
*
10617 AGAGTTTT-TCTCGCTTGAGATAGTTTCCCT-GAAAACAGAAGA-TTTGTCTCGCTTGAGATAGT
1 AGA-TTTTATCTCGCTTGAGATAGTTTCCCTCG-AAACAGAAGATTTTATCTCGCTTGAGATAGT
* * *
10679 TT-CCTCGAAATAGAAGATTTTACCTCGCTTGAGATAGTTT-CCTTGAAAC--A
64 TTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
*
10729 AGATTTTTTCTCGCTTGAGATA-TTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * ** *
10792 CCCT-GAAATAAAATATTTTATCTCGCTAAAGA-A-TTTCACTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
10841 AGA-TTTGTCTCGCTTGAGATGGTTT--CTC-AAATAGAAGA-TTT-TCGT-GCTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATC-TCGCTTGAGATAGTT
* * * * *
10899 TCCCTCAAAACAGTAGATTTTATCTC-CTTGAGATAGTTTCACTCGAAAAAAA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
** *
10951 AGA-TTTATCTCGCTTGAGATAGTTTCAAT-GAAAC-GAATATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
11013 CCTTC--AA-ATAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAAAAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * ** *
11062 AGATTTTTTCTCGCTTGAGATAGTTTCCCTCAAAATTGAAGATCTTA--TCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* *
11125 CCCTCGAAACAGAAGATTTTATCTCGCTTAAGATAGTTTCCCTCGAAAGAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
11177 AGATTTT-CCTCGCTTGAGATA-TTTACCCTTGAAACAGAAGATTTTACCTCGTTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTT-CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * * *
11240 TCCCTTGAAACAAAATATTTTATCTCGGTTGAGATAGTTTCCCTCAAAACAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
11293 AGATTTTATGTCGCTTGAGATAGTTT-TCTCGAAACAGAAAATTATT-TCTCGCTTCAGATAGAT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATT-TTATCTCGCTTGAGATAGTT
* * *
11356 TCCCTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTTCCCTTGAAAAAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* *
11409 AGATTTTTTCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTGTCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * *
11474 CCCTCGAAACAGAAGATTTTCTCTCTCTTGAGATTGTTTCACTCGAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
11526 AGATTTTTTCTTGCTTGAGATAGTTTCCTTCGAAACATAAGA--TTA--TCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * *
11587 CACTCG-AATAGAAGATTTT-TCTCGCTTGAGTTAGTTTCCCTCAAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
11637 AGATCTTATATCGCTTGAGATAGTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * *
11702 -CATACGAAACAAAAGATTTTATCTCGCTTAAGATAGTTTCCCTCAAAATAGA
66 CCCT-CGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
11754 AGATTTTGTCTCGCTTGTGATAGTTTCCCTCGAAACAGAAGAGTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
11819 CCCT-GAAAACAAAAGATTTTGTCTCGCTTGAGATAGTTTCCCTCGAAATAGA
66 CCCTCG-AAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
11871 AGATTTTATCTTG-TTGAGATAGTTTCCCTTGAAACAAAAGATTTT-TCTCGCTTGAGATATTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* *
11934 CACTCGAAA-AG-A-ATTTT-TCTCGCTTGAGATAGTTTCCCTTGAAAC--A
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
** ** * * *
11980 A-ATTTTATC-CGCTAAAGATAGTTTTACTTGAAACATAAGA-TTTGTCTCGCTTGAGATA-TTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
** * * * * * * *
12041 ATCTCAAAATAGAAGA-TTTGTCTCACTTGAGATAGTTTCCCTCAAAATATA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
12092 TGATTTTATATC-CTTGAGATAGTTTCCCTCG-AACAAAAGA--TTATCTCGCTTGAGATATTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * *
12153 CCAAT-GAAACTGAAAATTTTATATCGCTTGAGATAGTTTCTCTCGAAATAG-
66 CC-CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
12204 A-A-TTT-T-T-ACTTGAGATAGTTTCCCTTGAAA-TGAATATTTTATCTTGCTTGAGATAATTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
12263 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGCTAGTTTCCGTTGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
12315 AGATTTTATCTCGCTTGAGATAGATTCCCACGAAACATAAGATTTTATCTTGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* *
12380 CACAT-GAAACA-AA-ATATTA--TCGCTTGAGATAGTTTCCCCTCGAAACAGA
66 C-CCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CCCTCGAAACAGA
* * * * *
12429 A-AATTT-TCTCGTTTGAAATAGTTTCCCTCGAAACAGATGATTTTGTCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* ** * **
12492 CCCTTGAAATTGAAGATTTT-TCTCGC-T----T-GTTT---TCAAAATTGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
12534 AGA-TCTA--TCGCTTGAGATAGTTTCCCTCAAAAAAGAGGATTTTATCTCGCTTGAGATCGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * *
12596 CCCTCGAAA-ATTAAGATTTTATATTGCTTGAGATAATTTTCCTCGGAACAGA
66 CCCTCGAAACA-GAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* *
12648 AGATTTTATCTCGCTTAAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGATATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
12713 CTCTCGAAACAGAAGATTTTATATAGCTTGAGATAGTTTCCCTTGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
** * *
12765 AGATTTTATCTCGCTTGAGATA-TTT-CCTCGAAACAGAAGATTTTGCCTTGCTTGGGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * *
12828 CCCTTGAAATAGAATATTTTGTCTCGCTTGAGATACG-ATCCCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATA-GTTTCCCTCGAAACAGA
* * * * * *
12880 AGAATTTATCTCACTTAAGATATTTTACCTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * ** *
12945 CCTTCGAAACATAACATTTTATCTCGCTGGAGATAGTTTCCCTTAAAACATA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
12997 ATATTTTATCTCGCTTGAGAAAATTTCTCTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* *
13062 CCCTC-AAA-ATAAGATTTTGTCTTC-CTTGAGATAGTTTCCCTCGTAAACAGA
66 CCCTCGAAACAGAAGATTTTATC-TCGCTTGAGATAGTTTCCCTCG-AAACAGA
13113 AGATTTTATCTC-CTTGAGAT-GTTT--CTCGAAACAGAAGA-TTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
*
13173 CCCAT-GAAAC---AGA-TTTATCTTGCTTGAGAT--TTT-CCTCGAAACAGA
66 CCC-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* *
13218 AGATTTTATCTCGCTTGAGATA-TTT-TCTTGAAACAGAAGA-TTT-TCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* ** * * *
13279 CCTTTTAAACAAAATATTTTATCTCG-TTGAGATAGTTTCTCTTGGATCGAAACAG-
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTC-C----CTCGAAACAGA
* * * *
13334 A-ATTTTAT-T-TCTTGAGATAGTTTTCATCGAAAC--AA-ATTTTTTCTCGCTTGAGATAG-TT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* *
13392 CCCTCG-AA-AGAAGATTTT-TCTTCTGCTT---ATAGTTTCCCTTGAAACA-T
66 CCCTCGAAACAGAAGATTTTATC-TC-GCTTGAGATAGTTTCCCTCGAAACAGA
* * ** *
13439 AGATTTTGT-T-GTTTGAGATAGTTTTTCTCAAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
*
13502 CCCTCGAAATAGAAGATTTTATCTCGCTTGAGATTA-TTTCCCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGA-TAGTTTCCCTCGAAACAGA
* *
13554 AGATTTTTTCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCTT--G--A--TT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
13613 CCCTCGAAATATAAGATTTTATCTCGCTTAAGATAGTTTCCCTTGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
13665 AGATTTTATCTCGCTTGATATAGTTTCTCTCGAAACAGAAGATTTTATATCGCTTGAGAAAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* *
13730 CCCTCGAAACAGTAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAAAAG-
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
13781 A-ATTTTGTCTTG-TTGGGATAGTTTCCCTCGAAATAG-A-ATTTTGTCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
13842 -CC-CGAAACAGAAGA-TTTATCTCACTT--GATATTTTACCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* *
13889 AGATTTT-TCTCGCTTGAGATAGTTTCCTTCGAAATA-AA-ATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
** * * * *
13951 CCCTTAAAACAGAATATTTTA--TCACTT--G--AGTTTCTCTCGAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
13997 AGA-TTTGTCTCGCTTGAGATAGTTTCCCTCAAAATATAAGATTTTGTCTTGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * **
14061 CCCTCGTAACAGAAGATTTTATCTCCCTTGAG--A-TTTCAATC--AACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
*
14108 AGATTTTATCT-GCTTGAGATAGTTTCCCAT-GAAACAGAATATTTTAT-T-GCTTGAGATA-TT
1 AGATTTTATCTCGCTTGAGATAGTTTCCC-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * *
14168 TCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATA-TTT-TCTTGAAACAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
14219 AGATTTTACCTCGCTTGAGATAG-TT-CCTTGAAACA-AATATTCTATCTAGGTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * * * *
14281 CTCTTGGTTGATAGTTTCTCGAAACAGAAGATTT-TATTCGCTTGAGATAGTTTTCATCGAAACA
66 C-C---CTCGA-A-----AC-AGA-AG-A-TTTTAT-CTCGCTTGAGATAGTTTCCCTCGAAACA
14345 GA
116 GA
* * * *
14347 A-ATTTT-TCTCGCTTCAGATAGATTCCCTCGAAACAGAAGATTTT-TCTTGGTTGATG-TAG-T
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGA-GATAGTT
* * * * ** *
14407 TCCCTTGAAACATATGATTTTGTCTCATTTGAGATAGTTT---TCAAAACAG-
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* *
14456 AG---TTATCTCACTTGAGATAGTTTCCCTCGAAACAGAAGA-TTTGTCTCGCTTGAGATTA-TT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGA-TAGTT
* *
14516 TCCCTCGAAATAGAAGATTTTTTCTCGCTTGAGATAGTTT-CCTCGAAACAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
14568 AGA-TTTATCT--C----GAT-GATTCCCTCG-AATATAAG-TTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
*
14623 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCTCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
*
14675 AGATTTTATATCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
14740 CCCTCGAAACAGAAGATTTTGTCTTGCTTGGGATAGTTTCCCTCGAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
14792 ATATTTTGTCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGA-TTTATCTCACTTAAGATA-TTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
14855 ACCTCGAAACAGAAGA-TTT-TCTCGCTTGAGATAGTTTCCTTCGAAATATA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
14905 ACA-TTTATCTCGCTTGAGATAGTTTCCCT-TAAA-A-CAGA-TTTAT-TCACTTGAGAT--TTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * *
14962 --CTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGTTTCCCTCAAAATATA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
15012 AGATTTTGTCT-GCTTGAGATAGTTTCCCTCG-AAGAG-AGATTTTATATCCCTTGAGATTGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* *
15074 --CTCGAAACAGAAGATTTTATCTCACTTGAGATAGTTTCCAT-G-AA-AG-
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
15120 ATATTTTCTCTTGCTTGAGATA-TTT-CCTCGAAATAGAAGATTTTTTCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
15183 CCTTCAAAACAGAAGATTTTATCTCGCTT--G--A--TTCCCTCGAAATATA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* *
15229 AGA-TTTATCTCGCTT-AGATAGTTTCCCTCGAAAAAGAAGATTTTATCTCGCTTGATATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* *
15292 CTCTCGAAACAGAAGATTTTATATCGCTTGAGATAGTTTCCCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
*
15344 AGATTTTATCTCGCTTGAGATAGTTTCCCTC-AAACAGAAGATTTT-TCTCACTTGAGATAG-TT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* *
15406 CCCTCG-AA-ATAAGA-TTTGTCTCGCTTGAGATAGTTTCCCTC-AAA-A-A
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* *
15452 AGAATTTATCTCACTTGAGATA--TT-CCTCGAAAACAGAAGATTTT-TCTCGCTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCG-AAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * *
15513 T-CCTCGAAATATAAGATTTTATCTCGCTTGAGATAGTTT-CCT-TAAACAG-
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
15562 ATA-TTTATCT--CTTGAG--A-TTTCTCTCGAAATAGAAGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* *
15621 CCCTC-AAA-ATATAGA-TTT-TCTTGCTTGAGATAGTTT-CCTCGAAACAGA
66 CCCTCGAAACAGA-AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
*
15669 AGATTTTATCTCGCTTGAGAT-GTTT-TCTCGAAACAGAAGATTTTAT-TCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* *
15731 -CCT-GAAAC-----A-TTTATCTTGCTTGAGATA-TTT-TCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
*
15773 AGATTTTATCTTCGCTTGAG--A-TTT--CTCGAAACAGAAGATTTTGTCTCGCTTGAGATAGTT
1 AGATTTTATC-TCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
*
15833 T--C-C-AAACAGAAGATTTTATTCTCTGGTTGAGATAGTTTCCCTCGAAACAGA
65 TCCCTCGAAACAGAAGATTTTA-TCTC-GCTTGAGATAGTTTCCCTCGAAACAGA
* *
15884 AGATTTTGTCTCGCTTGAGATAGTTT-TCTCGAAACAGAA-A-TTT-TCTCGCTT--GATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
*
15943 CCC-CGAAACAGAAGATTTT-T-TCGCTTGAG-TA-TTTCCCTCGAAACA-T
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
15989 AGA-TTT-TCTCGCTTGAGATAGTTT-CCTCGAAACAGAAGATTTTATCT--CTTGATGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGA-GATAGTT
* *
16049 TCCCTCGAAATAGAAGATTTTATCTCGCTTGAGATAGTTT-CCTCGAAATAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
16101 AGATTTTATCTCGCTTGAGATAGTTT-CCTCGAAACAGAAGATTTTATCTCGCTT--GATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
*
16163 CCCTCG-AA-A-TAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
*
16212 AGATTTTATCTCGCTTGATATAGTTT-CCTCGAAACAGAAGATTTT-T-TCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
16274 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
16326 AGATTTT-TCTTGCTTGAGATAGTTT-CCTCGAAATAGAATA-TTTGTCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
16388 CCCTC-AAACAGAAGA-TTTATCTCACTTGAGATATTTTACCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
16438 AGATTTT-TCTCGCTTGAGATAGTTT--C-CGAAATATAACATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
16499 CCCT--TAA-AGAAGATTTTTATC-C-CTTGAGAT--TTT-TCTCGAAATAGA
66 CCCTCGAAACAGAAGA-TTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
16544 AGA-TTT-TCTCGCTTGAGATAGTTT-CCTCAAAATA-AAGATTTTATCTTGCTTGAGAT--TTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * ** * *
16603 CCCTCGAAATTTTAG-AGATTGT-T-TCGAAAT-AGAT-TTTATCTCACTTGAGATAGTTTCCTC
66 CCCTCGAAA---CAGAAGATTTTATCTCG-CTTGAGATAGTT-TC-C-CTCGA-A-A-------C
*
16663 GAAA
115 -AGA
** * * *
16667 CAGAAGATTTTATCGCTTGAGATA-TTTCCCTCGAAATAGAAGATTTTATCTCGCTTGAGATAGT
1 -AG-ATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGT
16731 TTCCCTCGAAACAGAAGATTTTA--TCGCTT--GATA-TTT-CCTCG-AA-A-A
64 TTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
*
16776 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCT--CTTGATATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
16839 --CTCGAAACAGAAGA--TT-T-T-GCTTGAGATAGTTTCCCTCG-AA-AGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
16882 A-ATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG-AGA-TTT-T-T--CTT--GATA-TTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
** * *
16937 CCCTCGAAGTAG-A-ATTTTGT-TCTGCTTGAGATAG-TTCCCTC--AATAG-
66 CCCTCGAAACAGAAGATTTTATCTC-GCTTGAGATAGTTTCCCTCGAAACAGA
16983 AGA-TTT-TCT--CTTGAAGATA-TTT-CCTCG-AAC-----ATTTT-TCTCGCTTGAGATAGTT
1 AGATTTTATCTCGCTTG-AGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * * * *
17035 T-CCT-TAAATATAACATTTTATCTCGCTTGAGA-AGTTTCCCT-TAAACA-T
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * **
17083 A-A-TTTATCT--CTTGAGA-A-TTTCTCTCGAAATAGAAGATTTTGCCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * *
17142 CCCTC-AAATATAAGATTTTGTCTTGCTTGAGAT--TTT-CCTCGTAAC--A
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* ** *
17188 A-A-TTTATCTCCCTTGAGAT-GTTT-CAACGAAACAGAAGATTTCATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
17249 CCCAT-GAAACAG-A-ATATTATCTTGCTTGAGATA-TTT-TCTCGAAGCAGA
66 CCC-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
17297 AGATTTTATCTCGCTTGAGATA-TTTCTCTTGAAACAGAAGATTTTACCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * * ***
17361 CCTTTGAAACA-AATA-TTTA--TCGGTTGAGATAGTTTCTCTTG--GTTG-
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* **** *** **** ***** *
17406 AGATAGTT-TCTCGAAACAGAATA-TATTATTTCGCTTGAGATAG-TTTTCATCGAAAAAAAATC
1 AGAT-TTTATCTCGCTTGAG-ATAGT-TTCCCTCGAAACAGA-AGATTTT-ATC----TCGCTTG
* * *
17468 AGA-AGATTCCCTCGAAACAGAAGA-TTT-TCTTGCTTGATATAGTTTCCCT-GAAAC--A
57 AGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
17523 TGATTTT-TCTCGTTTGAGATAGTTT-TCTC-AAACAGAAGATTTTATCTCGCTTGAGAT-GTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* *
17584 CCCTCGAAACAGAAGATTTTGTCTCGCTTGAGATTA-TTT-CCTCAAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGA-TAGTTTCCCTCGAAACAGA
* * *
17635 AGATTTT-TCTCGCTTGATATAGTTTCCTTCG-AA-ATAAGATTTTATCTCGCTT--G--A--TT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
17691 CCCTCGAAATATAAGATTTTTTCTCGCTTGAGATAGTTTCCCAT-GAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCC-TCGAAACAGA
* * * **
17743 AGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAATAGAAGATTTTATATTTCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * ** * * * *
17808 CCCTTGAAACATAATTTTTTATCTTGCTTGAGATACTTTCCCTCCAAAAAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
17860 AGATTTTATCTAGC-TGTGATAGTTTCCCTAGAAACAGAAGA-TTTATCTCGCTTGAGATAG-AT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * ** *
17922 -CCACGAAATAGAA-ATTTTATCTTGCTTGAGATAGTTTCAATTGAAACA-A
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
*
17971 A-ATTTTATCTCGCTTGAGAT-GTTTCCCTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * **
18034 -CCTTGAAACAGAA-ATTTT-TCTCG-TTGAGATAGTTTCGCTTGAAATTGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
*
18082 AGATTTT-T-TCTCTTGAGA-AGTTTCCCTC-AAA-ATGAAGA---TAT-TCGCTTGAGAT-GTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACA-GAAGATTTTATCTCGCTTGAGATAGTT
* * * * **
18137 TCCTTCGAAATAGAAGATTTTATCTCGCTTGAGATCGTTT--TTCGAAA-TTA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
18187 AGATTTTATATTGCTTGAGATAGTTTTCCTCGGAATAGAAGATTTTATCTCGCTTAAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * * * *
18252 ACCTCAAAACAGAAGATTTCATTTCGCTTGATATAGTTTCTCTCAAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* *
18304 AGATTTTATATCGCTTGAGATAGTTTCCCTCGAAACAGGAGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
18369 CCCTTGAAACAAAAGATTTTGAT-TCGCTTGGGATAGTTTCCCTCGAATCAGA
66 CCCTCGAAACAGAAGATTTT-ATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
18421 AGATTTTATATCGCTTGAGATACTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
** * * * *
18486 CAGTTGAAACAGAAGATTTTATCTCACTTGAGATAG-TTCCCACGAAATA-A
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
18536 AGATTTTATCT-GCTTGAGATAGTTTCACTTGAAACAAAATATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* **
18600 CCCTCGAAACAGAAGATTTTTTCTCATTTGAGATAGTTTCCCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * ** * *
18652 TGATTTTGTCTCGCTTGAGATAGTTTCCC-CTTAAATTGAAGATTTTTTCTTGCTTGAGAT-GTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTC-GAAACAGAAGATTTTATCTCGCTTGAGATAG-T
18715 TTCCC-C-AAA-ATGAAGATTTTAT-T-GCTTGAGATAGTTTCCCTCGAAACAGA
64 TTCCCTCGAAACA-GAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
18765 GGATTTTATCTCGCTTGAGATCGTTTCCCTCGAAA-ATTAAGATTTTATATTGCTTGAGATAATT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACA-GAAGATTTTATCTCGCTTGAGATAGTT
* * *
18829 TTCCTCGGAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAATAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* ** * *
18882 AGATTTTATCTCGCTTGATATAGTTTGTCTCGAAACATAAGATTTTATATCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
18947 CCCTCGAAACAAAAGATTTTATCTCTCTTGAGATAGCTTCCCTCGAAACAAA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * * * * * *
18999 AGAATTTATCTCACATCAGATATTTTACCGCGAACCATATA-ATTTTTTCTCGCTTGAGAAAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA-AGATTTTATCTCGCTTGAGATAGTT
* * * * *
19063 TCCTTCGAAACA-ATACATTTTAACTCGCTTGAGATAGTTTCCCTTGAAACATA
65 TCCCTCGAAACAGA-AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
19116 ATATTTTGTCTCGCTTTAGATAGTTTCCCTTGAAACAAAATATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
19181 CCCTCGAAATAGAATATTTTGTCTCGCTTGAGATAGTTTCCCTCGAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
19233 ATATTTTGTCTCGCTTGAGATAGTTTCCCTCCAAATAGAAGATTTTATCTTGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
** * * * *
19298 CCCTTAAAATAGACA-A-TTTATTTCCCTTGAGATAGTTTCCCTCGAAACAAA
66 CCCTCGAAACAGA-AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
*
19349 AGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAGAAGATTTTATCTCTCTAT-AGATAGT
1 AGATTTTATCTCGCTTGAGATAGTTTCCC-TCGAAACAGAAGATTTTATCTCGCT-TGAGATAGT
19412 TTCCCAT-GAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
64 TTCCC-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
19466 AGATTTTATCTCGCTTGAGATATTTTCCCTAGAAGCAAAATATTTTACCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * * *
19531 CTCTTGAAACAAAATATTTTATATGGGTTGAGATAGTTTCCCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * ** * *
19583 AGATTTTATGTCGCTTGAGATAGTTTTCCTTGAAACAAAATTTTTTTTCTCGCTTCAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * *
19648 CCTTCCAAACATAAGATTTTATCTCGCTTGAGAAAGTTTCCCTCGAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * *
19700 AGATTTTATCTAGCTTTAGAGAGTTT-CCTAAGAAACAAAAGATTTTATCTCTCTTGAGATTGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCT-CGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * *
19764 TCCCTTGAAACATAATATTTTATCTCGCTTGAGATAGTTTCCCTCGAATCAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
19817 AGATTTTATCTCACTTGAGATCGTTTCCCTTGAAACAGAAGAATTTT-TCTCGCTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAG-ATTTTATCTCGCTTGAGATAGTT
* * * * *
19881 TCCCTCGAAATAGAAGATTTTGTCTCGGTTGAGATCGTTTCCCTCGAAATAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * * **
19934 AGATTTTATCTCGCTTGAGATAGTTTACCTTGAAATAAAATATTTTTTCTCGTTTGAGATTTTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * * *
19999 CCCTCAAAACAGATGATTTTTTCTCCCTTGTGATAGTTTCCTTTGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * **
20051 AGATTTTATCTCGCTTGAGATAGTTTCCTTTGAAACAAAATATTTTATCTCGCTAAAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * * * *
20116 CCATCGAAACATAATATTTTGTCTCGCTTGAGATTGTTTCTCTCAAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
*
20168 AGAATTTATCTC-CTTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
1 AGATTTTATCTCGC-TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* ** * **
20232 TCCCTTGAAATTGAAGATTTT-TCTC-CTTGAGAT-GTTTTCCCTCAAAATTGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TTTCCCTCGAAACAGA
* * * * * *
20283 AGATATTATATCGCTTGAGATTGTTTCCCTCGAAATAGAGGATTTTATCTCGCTTGAGATCGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * *
20348 CTCTCGAAA-ATTAAGATTTTATATTGCTTGAGATAGTTTTCCTCGTAACAGA
66 CCCTCGAAACA-GAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
20400 AGATTTTATCTCGCTTGAGATAGTTTACCTCGACACAGAAGATTTTATCTCTCTTGATATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
20465 CTCTCAAAACAGAAGATTTTATATCGCTTGAGATAGTTTCCCTCGAAAC---
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * ** *
20514 ATATTTTATCTCACTTAAGATAGTTTCCATTTAAACAAAAGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * *
20579 CCGTCGAAACATAAGATTTTGTCTCGCTTGAAATAGTTTACCTCGAAACAAA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
20631 AGATTTTGTCTCGCTTAAGATAGTTTCCCTCGAAACAGAAGATTTTTTCTTGCATAAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* **
20696 CCCTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTTCAATCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
20748 AGATTTTATCTCGCTTGAGATAGTTTCCAT-GAAACAGAATATTTTATCTCGGTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * ** *
20812 CCCTTGAAACAGAAAATTTTATCGCGCTTGAGATAGTTTCTATCGAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * *
20864 TGATTTTGTCTCACTTGAGATAGTTTCCCTCAAAATAGAAGATTTTGTC-CTGCTTTAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTC-GCTTGAGATAGTT
* ** *
20928 TCCCTCGTAACAGAAGATTTTATCTTC-CTTGAGATAGTTTCAATCTAAACAGA
65 TCCCTCGAAACAGAAGATTTTATC-TCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
20981 AGATTTTATCTCGATTGAGATAGTTTCCCAT-GAAACAGAATATTTTATTTCGCTTGAGATATTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCC-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * * *
21045 TCTCTCGAAACAGAAGATTTTATCTAGCTTGAGATATTTTCCCTTGAAACATA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
21098 AGATTTTACCTCCCTTGAGATAGTTTCACTTGAAACAAAACATTTTATCTCAG-TTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTC-GCTTGAGATAGTT
* **** * **** *** ****
21162 TCCCTTGGTTGAGATAG-TTTT-CCTCGAAACAGA-AGATTTTATGTCGCTTGAGA
65 TCCCTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGAAACAGA
**** * * ** *** * *** ** *
21215 TAG-TTTT-TCTCGAAACAGAAATTTTTTCTCGCTTCATATAGATTCCGTCGAAGC-AGAAGAT-
1 -AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA-AGATTTTATC-TCGCTTG-AGATA
** **** ** **** **
21276 -TTTGTCTCGCTTGAGATAG--TTTCCCTCGAAACAGA-AGATTATGCCTCTC-TTA-AGA
62 GTTTCCCTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG-TT-T-CC-CTCGAAACAGA
** **** * * ** **** ** ****
21331 TAG--TTTCCCTCGAAACAGAAAATTTTGTCTCGCTTGAGATAG--TTTCCCTCGAAACAGA-AG
1 -AGATTTTATCTCGCTTGAG-ATAGTTTCCCTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG
** * **** ** * ****
21391 ATTTTTTCTCG---CTTG-AGATTGTT-TCCCTCGAAACAGA-AGATTTTTTCTTGCTTGAGA
63 --TTTCCCTCGAAAC-AGAAGATT-TTAT--CTCGCTTGAGATAG--TTTCCCTCGAAACAGA
** * **** ** **** * * ** **
21448 TAG-TTTCCT-TAGAAACAGA-AGATTTTATCTCGCTTGAGATG-GTTTCCCTCGAAAT-AGA-A
1 -AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGAAACAGAAGATTTTATCTCG-CTTGAGATA
** **** ** *** *** ****
21507 GATTTTTTCTCGCTTGAGATAG--TTTCCCTCAAAAT-AGA-AGATCTTATATCGCTTGAGA
62 G--TTTCCCTCGAAACAGA-AGATTTTATCTC-GCTTGAGATAG-T-TTCCCTCGAAACAGA
** **** ** ** * * ***
21565 TAG--TTTCCCTCGAAACAGA-AGATTTTATCTCGCTAGAGATAG--TTT-CCTACGAAACAAAA
1 -AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTATCT-CG---CTTGA
** **** * * ** ** *** ****
21624 GAT--TTTATCTCGCTTGA-AATAGTTTCCCTCGAAAT-AGA-AGATTTTATTTCGCTTGAGA
58 GATAGTTTCCCTCGAAACAGAAGATTTTATCTCG-CTTGAGATAG--TTTCCCTCGAAACAGA
** **** ** **** ** * **
21682 TAG--TTTCCCTCGAAACAGA-AGATTTTGTCTCGCTTGAGATA-A-TTTCCCTAGAAAT-AGA-
1 -AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTATCTCG-CTTGAGAT
** **** ** **** ** ****
21740 AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTTTCTCGTTTGAG-
61 AG--TTTCCCTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGAAACAGA
* ** **** ** **** ** * * *
21798 ATATTTTCCCTCGAAACAGA-AGATTTTTTCTCGCTTGAGATAG-TTTCCT-TTGAAACATAAGA
1 AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTATCTCG---CTTGAGA
** * **** ** * **** * * ** *
21860 T--TTTATCTTGCTTGAGATAG-TTTCCT-TTGAAACAAAATATTTTATCTCGTTAA-AGA
60 TAGTTTCCCTCGAAACAGA-AGATTTTATCTCG-CTTGAGATAGTTTCCCTCG-AAACAGA
**** ** **** * * * ***
21916 TAG-TTTTA-CTCGAAACAGA-AGATTTTGTCTCGCTTGAGATG-GTTTCTCTCAAAAT-AGA-A
1 -AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGAAACAGAAGATTTTATCTC-GCTTGAGATA
** * * * * *** * ** *****
21975 GATTTTGTCTC---ACTTG-AGATAGTT-TCCCTCAAAACATATGATTTTATCTCCTTTGAG-
62 G--TTTCCCTCGAAAC-AGAAGAT-TTTATCTCGCTTGAGATA-G--TTTCCCTCGAAACAGA
* * ** *** ** **** * *** *
22032 ATACTTTCCCTCGAAACAAAAGAT--TTTATCTCGCTTGAGATAG--TTT-CCTAAATAGA-ATA
1 AGATTTTATCTCG---CTTGAGATAGTTTCCCTCGAAACAGA-AGATTTTATCTCGCTTGAGATA
* ** **** * ** * ** *
22091 TATTTAACTCGCTTGAGATAG--TTTCTCTCGAAAT-AGA-AGATTTTTCCTCGCTATAGA
62 -GTTTCCCTCGAAACAGA-AGATTTTATCTCG-CTTGAGATAG--TTTCCCTCGAAACAGA
* *** * * ** **** ** ***
22148 TAG-TTTCACTCTAAATAGA-ATATTTTATCTCGCTTGAGATAG--TTTCCCTCGAAACAAAAGA
1 -AGATTTTA-TCTCGCTTGAGATAGTTTCCCTCGAAACAGA-AGATTTTATCTCG---CTTGAGA
** **** * **** * * ** *
22209 T--TTTGTCTCGCTTGAGATAG--TTT-CCGTCGAAACAGAACATTTTATCTCG---CTTG-
60 TAGTTTCCCTCGAAACAGA-AGATTTTATC-TCGCTTGAG-ATAGTTTCCCTCGAAAC-AGA
* * ** * *** ** **
22262 AGA--TTATGTCGCTCGAAACAGA-AGATTTTATCTCTATTGAGATAG--TTTCCCTCGAAAT-A
1 AGATTTTATCTCGCTTG----AGATAG--TTTCCCTCGAAACAGA-AGATTTTATCTCG-CTTGA
** * * * ** **** * * ***
22321 GA-AGATTTTATCTCG---CTTGATACACTTTCCCTCGAAACA-AAAGATTT-TCTCG-TTGAGA
58 GATAG--TTTCCCTCGAAAC-AGA-AGATTTTATCTCGCTTGAGATAG-TTTCCCTCGAAACAGA
** * **** ** **** * * * *
22379 TAG--TTTCCCACGAAACAGA-AGATTTTATCTCGCTTGAGATG-GTTT-CCTCGAAAC-AGAAG
1 -AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGAAACAGAAGATTTTATCTCG---CTTG-AG
* * * * * * * *
22438 ATTTTGTTTCGCTTGAGATAGTTTGAGATTTTTTGCTCACTTGAGATAG-TTCCCTTCGAAACAG
59 A--TAGTTTCCCTCGAAACAG---AAGATTTTAT-CTCGCTTGAGATAGTTTCCC-TCGAAACAG
22502 A
117 A
* ** * * * **
22503 AGATTTTATCTCGTTTGAGATAGTTTTTCTTGAAACAAAATATTTTATCTCGCTAAAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * *
22568 CCCTCGAAACAGAAGATTTTGTCTCGCATGAGATAGTTTCTCTCAAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
22620 ATATTTTGTCTTGCTTGAGATAGTTTCCCTCAAAACAGAAGATTTTATCTC-CTTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTT
* * * *
22684 TCCCTCGAAACAAAATATTTTATCTCGCTTGAGATAATTTCCCAT-GAAACTGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCC-TCGAAACAGA
* * * * *
22737 AGATTTTATATCACTTGAGATAGTTTCCAAT-GAAACAAAATATTTTATCTCGCTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCC-CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * * *
22801 TCTCTCGAAATAGAAGATTTTATATCGCTTGAGATAGTTTGCCTTGAAACAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* ** *
22854 ATATTTTATCTTACTTGAGATACTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
22919 CCCTTGAAACAGAAGATTTTATCTCGCTTGAGATAGATTCCCACGAAACATA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * * *
22971 AGAATTTATCTTGCTTAAGATAGTTTCACTTGAAACA-AATTATTTTATATAGCTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAA-GATTTTATCTCGCTTGAGATAGTT
* * * * **
23035 TCCCTCGAAACAGAAGATTTTTTCTCTCTTGAGAAAGTTTCCCTTGAAATTGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * ** * *
23088 AGATTTT-TCTCGCTTAAGAT-GTTTTCCCTCAAAATTGAAGATCTTATATCGCTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAG-TTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * *
23151 TCCCTCGAAACAGAGGATTTTATCGCGGTTGAGATCGTTTCCCTCG----A-A
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
23199 A-A--TTA---AGCTTGAGATAGTTTTCCTCGGAATAGAAGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
*
23258 CCCTCAAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
23310 AGATTTTATATCGCTTGAGATAGTTTCCCTCAAAATAGATGATTTTATCTCGGTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
23375 CCCTCGAAACAGAAGATTTTATGTCGCTTGAGATAGTTTTCCTCAAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * * *
23427 A-TTTTTTTCTCGCTTGTGATAGTTTCCCTCGAAACAGAATAATTTATCTCACTTAAGATATTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
23491 ACCTCGAAACAGAAGATTTTTTCTCACTTGAGATAGTTTCCCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* *
23543 ATATTTTATCTCGCTTGAGATAGTTT-CCTACGAAACAAAAGATTTTATCTCGCTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCT-CGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * *
23607 TCCCTCGAAACAGAAGGTTTTATCTCGCTTGAGATA-TTTACCATAGAAACAAA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CCCTCGAAACAGA
* * * * * *
23660 AGATTTTACCTCTCTTGAGATAGTTTCCCTTGAAACAAAATATTTTATCTCGGTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* ** * * * *
23725 CTCTCGAAGTAGAAGATTTTGTCTCACTTGAGATAGTTGCCCTCGAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
23777 AGATTTTGTCTCGCTTGAGATAGTTGCCCTAGAAACAGAAGATTTTTTCTCGCTTAAGATTGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * **
23842 CACTCGAAACAGATGATTTTTTCTCGCTTTAGATAGTTTCCTTCGAAACATT
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
23894 AGATTTTATCTCGCTTGATATAGTTTCCCTCGAAATAGAAGATTTTTTCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * *
23959 CCCTCAAAATAGAAG-TCTTATATTGCTTGAGATAGTTTCCCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
24010 AGATTTTATCTCGCATGAGATAGTTT-CATACGAAACAAAAGATTTTATCTCACTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCT-CGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * *
24074 TCCCTCGAAATAGAAGATTTTGTCTCGCTTGTGATAGTTTCCCTCGAAATAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
24127 TGATTTTATCTCGCTTGAGATAGTTTCACTC-AAATCTGAAGATTTTGA-CTCGCTTGAGATCGT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAA-CAGAAGATTTT-ATCTCGCTTGAGATAGT
24190 TTCCCTCGAAACAGAAGAGTTTT-TCTCGCTTGAGATAGTTTCCCT-GAAAACAGA
64 TTCCCTCGAAACAGAAGA-TTTTATCTCGCTTGAGATAGTTTCCCTCG-AAACAGA
* * *
24244 AGATTTTGTCTCGCTTGAGATAGTTTCCCTCGAAATAGAAGATTTTACCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
24309 CCCTTGAAACAAAAGATATTT-TCTCGCTTGAGATATTTTCCCTCGAAACAGA
66 CCCTCGAAACAGAAGAT-TTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * **
24361 AGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAATAAAATATTTTATCTCGCTAAAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * *
24426 CACTCGAAACAGAAGATTTTGTCTCGCTTGAGATGGTTTCTCTCAAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
24478 AGATTTTGTCGT-GC-TGAGATAGTTTCCCTCAAAACAGTAGATTTTATCTC-CTTTGAGATAGT
1 AGATTTTATC-TCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGT
* * * *
24540 TTCACTCGAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCCAAT-GAAACTGA
64 TTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC-CTCGAAACAGA
* * * * *
24594 ATATTTTATCTCGCTTGAGATAGTTTCCTTCAAAATATAAGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * **
24659 CCCTCGAAATAGAAGATTTTTTCTCGCTTGAGATAGTTTCCCTCAAAATTGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* *
24711 AGATCTTATATCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
24776 CCCTCGAAACAGAAGATCTT-CCTCGCTTGAGATA-TTTACCCTTGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CCCTCGAAACAGA
* * * * * * * *
24827 AGAATTTACCTCGTTTGAGATAGTTTCCCTTGAAACAAAATATTTTATCTCGGTTGGGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* *
24892 CCCTCGAAACAGAAGATTTTATGTCGCTTGAGATAGTTTTCCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
24944 AAATTATT-TCTCGCTTTAGATAGATTCCCTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTT
1 AGATT-TTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * **
25008 TCCCTTGAAAAAGAAGATTTTTTCTCGCTTGAGATAGTTTCTTTCGAAACAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
25061 AGATTTTGTCTCGCTTGAGATAGTTTCCCTTGAAACAAAAGATTTTTTCTCTCTTGAGATTGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * *
25126 CACTCGAAATAGAAGATTTTTTCTTGCTTGAGATAGTTTCCTTCGAAACATA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
25178 AGATTTTATATCGCTTGAGATAGTTTCACTCGAAATAGAAGATTTTTTCTTGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * *
25243 CCATCAAAATAGAAGATCTTATATCGCTTGAGATAGTTTCTCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
25295 AGATTTTATCTCTCTTGAGATAGTTT-CATACGAAACAAAAGATTTTATCTCGCTTAAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCT-CGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * *
25359 TCCCTCAAAATAGAAGATTTTGTCTCGCTTGTGATAGTTTCCCTCGAAACAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* ** * * * *
25412 AGAGTTTATCTCGCTTGAGATAGTTTATCTCGAATCTGAAGATTTTATCTCACTTGAGATCGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
*
25477 CCCTCGAAACAGAAGAGTTTT-TCTCGCTTGAGATAGTTTCCCT-GAAAACAAA
66 CCCTCGAAACAGAAGA-TTTTATCTCGCTTGAGATAGTTTCCCTCG-AAACAGA
* * *
25529 AGATTTTGTCTCGCTTGAGATAGTTTCCCTCGAAATAGAAGATTTTATCTTG-TTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * *
25593 CCCTTGAAACAAAAGATTTTTTCTCGCTTGAGATATTTTCACTCGAAAAAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * **
25645 ATATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAAAATATTTTATCTCGCTAAAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
** * * * ** * *
25710 TACTTGAAACAAAAGATTTTGTCTCGCTTGAGAT-GATTTATCTCAAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TTTCCCTCGAAACAGA
* * * * * *
25762 AGATTTTGTCTCACTTGAGATAGTTTCCCTCAAAACATATGATTTTATATC-CTTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTT
* * * * *
25826 TCCCTCGAGACAAAAGATTTTATCTCGCTTGAGATATTTTCCAAT-GAAACTGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC-CTCGAAACAGA
* * * * * * * *
25879 AAATTTTATATCGATTGAGATAGTTTCTCTCGAAATAGAATATTTTTTAC-CGGTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTAT-CTCGCTTGAGATAGTT
* * * * *
25943 TCCCTTGACAA-TGAATATTTTATCTTGCTTGAGATACTTTCCCTCGAAACAGA
65 TCCCTCGA-AACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
25996 AGATTTTATCTCGCTTGAGCTAGTTTCCGTTGAAACAGAAGATTTTATCTCGCTTGAGATAGATT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * *
26061 CCCACGAAACATAAGATTTTATCTTGCTTGAGATAGTTTCACTTGAAACAAA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
26113 ATATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTTTCTCGTTTGACATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * **
26178 CCCTCGAAACAGATGATTTTGTCTCGCTTGAGATAGTTTCCCTTGAAATTGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * ** * *
26230 AGATTTTTTCTCGCTTGAGAT-GTTTTCCAC-CAAAATTGAAGATCTTATATCGCTTGAGATAGT
1 AGATTTTATCTCGCTTGAGATAG-TTTCC-CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGT
* * * *
26293 TTCCCTCGAAAAAGAGGAATTTATCTCGCTTGAGATAGTTTCCCTCGAAA-ATTA
64 TTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACA-GA
* * *
26347 AGATTTTATATTGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTAAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* *
26412 CCCTCGAAACAGAAGATTTTATCTCGCTTGATATAGTTTCTCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* *
26464 AGATTTTATATCGCTTGAGATAGTTTCCCTCGAAATAGAAGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * **
26529 CCCTCGAAACAGAAGATTTTGTCTTGCATGGGATAGTTTCCCTCGAAGTAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * *
26581 ATATTTTGTCTCGCTTGAGATAGGTTCCCTCGAAACAGAAGAATTTATCTCACTTAAGATATTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
26646 ACCTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTTCCTTCGAAACATA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* ** * * * *
26698 AGATTTTATATCGCTTGAGATAGTTTCCCTTAAAACAGAATATTTTATCTCACTTGAGAAAATTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * *
26763 CTCTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGTTTCCCTCAAAATATA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
26815 AGATTTTGTCTTC-CTTGAGATAGTTTCCCTCGTAACAGAAGATTTTATCTCCCTTGAGATTGTT
1 AGATTTTATC-TCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
**
26879 TCAATCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCC-TCGAAACAGA
* ** * * *
26932 ATATTTTATCTTACTTGAGATATTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * *
26997 CTCTTGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCTTTGAAACAAA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * **** * * *
27049 ATATTTTATCTCGGTTGAGATAGTTTCTCTTGGTTGAGATAG--CTTCTCTCGAAAC-AGAAGAT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA-AGATTTTATCTCG---CTTG-AGA-
* * **** * * * ** ***
27111 TTTA-TTTCTCTTG----AGATAG--TTT-TCATCGAAACAAAAATTTTTTTCTCGCTTCAGA
60 --TAGTTTCCCTCGAAACAGA-AGATTTTATC-TCGCTTGAGATA-GTTTCCCTCGAAACAGA
** **** ** * * * * *
27166 TAGA--TTCCCTCGAAACAGA-AGATTTTTTCTTG---CTTG-ATATAGTT-TC-C-CTTGAAAC
1 -AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGAAAC-AGAAGAT-TTTATCTCGCTTG--AG
** **** ***** ** *
27221 ATATGATTTTGTCTCGTTTGAGATAG-TTTT-TCTCAAAACAGA-AGATTTTATCTCG---CTTG
59 ATA-G--TTTCCCTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGAAAC-AG
27280 -
117 A
* * ** **** ** ** ****
27280 AGATAGTT-TC-C-CTTGAAATAGAAGATTTTGTCTCGCTTGAGATTA-TTTCCCTCGAAACAGA
1 AGAT-TTTATCTCGCTTGAGAT---AG--TTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAG-
* ** **** ** *
27341 AGAGTTTTTCTCGCTTGAGATAG-TTTCCT-TCGAAAC-AGAAGATTTTATCTCGCTTGATTCCC
59 ATAGTTTCCCTCGAAACAGA-AGATTTTATCTCG---CTTG-AGA---TA----G--T--TTCCC
* *
27403 TCGAAATATA
108 TCGAAACAGA
* *
27413 AGATTTTATCTCGCTTAAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGATATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
27478 CTCTCGAAACAGAAGATTTTATATCGCTTGAGATAGTTTCCCTCGAAACATA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
27530 AGATTTTATCTCGCTTGAGATAGTTTCCCTAGAAACAGAAGATTTTGTCTTGCTTGGGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
27595 CCCTCGAAATAGAATATTTTGTCTCGCTTGAGATAGGTTCCCTCGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * *
27647 AGAATTTATCTCACTTAAGATATTTTACCTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * **
27712 CCTTCGAAATATAACATTTTATCTCGCTTGAGATAGTTTCCCTTAAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * *
27764 ATATTTTATCTCACTTGAGAAAATTTCTCTCGAAATAGAA-ATTTTGTCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * *
27828 CCCTCAAAATATAAGATTTTGTCTTGCTTGAGATAGTTTCCCTCGTAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * **
27880 AGATTTTATCTCCCTTGAGATTGTTTCAATCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
27945 CCCAT-GAAACAGAATATTTTATCTTGCTTGAGATATTTTCTCTCGAAACAGA
66 CCC-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
27997 AGATTTTATCTCGCTTGAGATATTTTCTCTTGAAACAGAAGATTTTACCTCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * * * ***
28062 CCTTTGAAACAAAATATTCTATCTCGGTTGAGATAGTTTCTCT-G-GTGAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* *** *** **** ****
28112 TAG-CTTT-TCTCGAAACAAAAGAT--TTTATTTCGCTTGAGATAG--TTT-TCATCGAAACAGA
1 -AGATTTTATCTCG---CTTGAGATAGTTTCCCTCGAAACAGA-AGATTTTATC-TCGCTTGAGA
* * ** *** ** **** ** * *
28170 AATTTTTTTCTCGCTTCAGATAGA--TTCCCTCGAAACAGA-AGATTTTTTCTTG---CTTG-
60 TA-GTTTCCCTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGAAAC-AGA
* * * ** *** * *
28226 ATATAGTT-TC-C-CTTGAAACATATGATTTTGTCTC-ATTTGAGATAG-TTTT-TCTCAAAACA
1 AGAT-TTTATCTCGCTTG--AGATA-G--TTTCCCTCGA-AACAGA-AGATTTTATCTC---GCT
** ** * *** ** * *
28285 AAAGAT--TTTATCTCCATTGAGATAG--TTTCCCTCGAAAC-AGAAGATTTTGTCTCGCTTGAT
55 TGAGATAGTTTCCCTCGAAACAGA-AGATTTTATCTCG---CTTG-AGA-------TAG--T--T
* *
28345 TCCCTCGAAATATA
104 TCCCTCGAAACAGA
* *
28359 AGATTTTATCTCGCTTAAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGATATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * *
28424 CTCTCGAAACAGAAGATTTTATATCGCTTGAGATAGTTTCCCTCGAAACATA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
28476 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTGTCTTGCTTGGGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * * *
28541 CCCTCGAAACAGAAGATTTTGTCTCGCATGAGATAGTTTCTCACAAAATAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
28593 ATATTTTGTCTTGCTTGAGATAGTTTCCCTCAAAACAGAAGATTTTATCTC-CTTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTT
* * * * * *
28657 TCCCTCGAAACAAAATATTTTATCTCGCTTGAGATAGTTACCTTTGAAACAAA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
28710 ATATTTTATCTCG-TTAAAGATAGTTAT-ACTCGAAACAGAAGATTTTGTCTCGCTTGAGATGGT
1 AGATTTTATCTCGCTT-GAGATAGTT-TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGT
* * * * * * *
28773 TTCTCTCAAAATAGAAGATTTTGTCTCACTTGAGATAGTTTCCCTCAAAACATA
64 TTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
28827 TGATTTTATCTC-CTTTGAGATACTTTCCCTCGAAACAAAAGATTTTATCTCGCTTGAGATAGTT
1 AGATTTTATCTCGC-TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * * * *
28891 TCCCT-AAAATAGAATATATTTAACTCGCTTGAGATAGTTTCTCTCGAAATAGA
65 TCCCTCGAAACAGAAGAT-TTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
** * * * *
28944 AGATTTTGCCTCGCTAT-AGATAGTTTCACTCTAAATAGAATATTTTATCTCGCTTGAGATAGTT
1 AGATTTTATCTCGCT-TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * *
29008 TCCCTCGAAACAAAAGATTTTGTCTCGCTTGAGATAGTTTCCGTCGAAACAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * **
29061 ACATTTTATCTCGCTTGAGATTA-TGTCGCTCGAAACAGAAGATTTTATCTCTATTGAGATAGTT
1 AGATTTTATCTCGCTTGAGA-TAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * * *
29125 TCCCTCGAAATAGAAGATTTTATCTCGCTTGATACACTTTCCCTCGAAACAAA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * *
29178 AGATTTTCTCTCGTTTGAGATAGTTTCCCACGAAACAGAAGATTTTATCTCGCTTGAGATGGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* *
29243 -CCTCGAAACAGAAGATTTTGTTTCGCTTGAGATAG-TT---T-------G-
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * *
29282 AGATTTTTTGCTCACTTGAGATAG-TTCCCTTCGAAACAGAAGATTTTATCTCGTTTGAGATAGT
1 AGATTTTAT-CTCGCTTGAGATAGTTTCCC-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGT
** * * * **
29346 TTTTCTTGAAACAAAATATTTTATCTCGCTAAAGATAGTTTCCCTCGAAACAGA
64 TTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * * *
29400 AGATTTTGTCTCGCATGAGATAGTTTCTCTCAAAATAGAATATTTTGTCTTGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* *
29465 CCCTCAAAACAGAAGATTTTATCTC-CTTTGAGATAGTTTCCCTCGAAACAAA
66 CCCTCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTTTCCCTCGAAACAGA
* * * *
29517 ATATTTTATCTCGCTTGAGATAATTTCCCAT-GAAACTGAAGATTTTA--TCACTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCC-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
* * * * *
29579 TCCAAT-GAAACAAAATATTTTATCTCGCTTGAGATAGTTTCTCTCGAAATAGA
65 TCC-CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * ** *
29632 AGATTTTATATCGCTTGAGATAGTTTGCCTTGAAACAGAATATTTTATCTTACTTGAGATACTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
*
29697 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGA
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * *
29749 AGATTTTATCTCGCTTGAGATAGATTCCCACGAAACATAAGAATTTATCTTGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * * *
29814 CACTTGAAACA-AATTATTTTATATAGCTTGAGATAGTTTCCCTCGAAACAGA
66 CCCTCGAAACAGAA-GATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * ** *
29866 AGATTTTTTCTCTCTTGAGAAAGTTTCCCTTGAAATTGAAGATTTT-TCTCGCTTAAGAT-GTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TT
* ** * *
29929 TCCCTCAAAATTGAAGATCTTATATCGCTTGAGATAGTTTCCCTCGAAACAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
* * * * * * *
29982 GGATTTTATCGCGGTTGAGATCGTTTCCCTCGAAA-ATTAAGATTTTATATTGCTTGAGATAGTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACA-GAAGATTTTATCTCGCTTGAGATAGTT
* * * *
30046 TTCCTCGGAATAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCAAAACAGA
65 TCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
*
30099 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATATCGCTTGAGATAGTTT
1 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
* * * *
30164 CCCTCAAAATAGATGATTTTATCTCGGTTGAGATAGTTTC
66 CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTC
30204 TCTTGGTTGA
Statistics
Matches: 24331, Mismatches: 4159, Indels: 2781
0.78 0.13 0.09
Matches are distributed among these distances:
92 1 0.00
93 4 0.00
94 1 0.00
96 6 0.00
97 9 0.00
98 25 0.00
99 43 0.00
100 28 0.00
101 20 0.00
102 34 0.00
103 67 0.00
104 143 0.01
105 273 0.01
106 401 0.02
107 409 0.02
108 536 0.02
109 539 0.02
110 662 0.03
111 1019 0.04
112 966 0.04
113 983 0.04
114 1194 0.05
115 1518 0.06
116 3022 0.12
117 11352 0.47
118 351 0.01
119 46 0.00
120 46 0.00
121 61 0.00
122 45 0.00
123 52 0.00
124 27 0.00
125 34 0.00
126 49 0.00
127 38 0.00
128 85 0.00
129 26 0.00
130 126 0.01
131 55 0.00
132 9 0.00
133 15 0.00
134 2 0.00
135 9 0.00
ACGTcount: A:0.29, C:0.18, G:0.16, T:0.37
Consensus pattern (117 bp):
AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT
CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
Found at i:3453 original size:37 final size:38
Alignment explanation
Indices: 3395--3479 Score: 95
Period size: 37 Copynumber: 2.3 Consensus size: 38
3385 TTTCCAATGA
* *
3395 AATGAA-AATTTTATCGATTGAGACAGTTTCTCTCGA-
1 AATGAATATTTTTATCGATTGAGACAGTTTCCCTCGAC
* * *
3431 AATAGAATATTTTTA-CGGTTGAGATAGTTTCCCTTGAC
1 AAT-GAATATTTTTATCGATTGAGACAGTTTCCCTCGAC
3469 AATGAATATTT
1 AATGAATATTT
3480 ATCTTGCTTG
Statistics
Matches: 41, Mismatches: 5, Indels: 5
0.80 0.10 0.10
Matches are distributed among these distances:
36 3 0.07
37 29 0.71
38 9 0.22
ACGTcount: A:0.33, C:0.12, G:0.16, T:0.39
Consensus pattern (38 bp):
AATGAATATTTTTATCGATTGAGACAGTTTCCCTCGAC
Found at i:7617 original size:19 final size:19
Alignment explanation
Indices: 7593--7629 Score: 65
Period size: 19 Copynumber: 1.9 Consensus size: 19
7583 ATTTTATCTC
*
7593 GGTTGAGATAGTTTCTCTT
1 GGTTGAGATAGCTTCTCTT
7612 GGTTGAGATAGCTTCTCT
1 GGTTGAGATAGCTTCTCT
7630 CGAAACAGAA
Statistics
Matches: 17, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
19 17 1.00
ACGTcount: A:0.16, C:0.14, G:0.27, T:0.43
Consensus pattern (19 bp):
GGTTGAGATAGCTTCTCTT
Found at i:7723 original size:136 final size:129
Alignment explanation
Indices: 7479--7748 Score: 301
Period size: 136 Copynumber: 2.0 Consensus size: 129
7469 GAATATTTTA
* *
7479 TCTTGCTTGAGATATTTTCTCGAAACAGAAGATTTTATCGCTTGATATTTCTCTTGAAACAGAAG
1 TCTTGCTTGAGATATTCTCTCGAAACAGAAGATTTTATCGCTTGATATTTCTCTCGAAACAGAAG
* * * * * *
7544 ATTTTACCTCGCTTGAGATAGTTTCCTTTGAAACAAAATATTTTATCTCGGTTGAGATAGTTTC
66 ATTTTACCTCGCTTCAGATAGATTCCCTCGAAACAAAAGATTTTATCTCGCTTGAGATAGTTTC
*
7608 TCTTGGTTGAGATAGCTTCTCTCGAAACAGAAGATTTTATTTCGCTTGAGATAGTTT-TCATCGA
1 TCTTGCTTGAGATA--TTCTCTCGAAACAGAAGATTTTA--TCGCTT--GATA-TTTCTC-TCGA
** * * * *
7672 AACAGAA-ATTTTTTTCTCGCTTCAGATAGATTCCCTCGAAACAGAAGATTTTTTCTTGCTTGAT
58 AACAGAAGA-TTTTACCTCGCTTCAGATAGATTCCCTCGAAACAAAAGATTTTATCTCGCTTGAG
7736 ATAGTTTC
122 ATAGTTTC
*
7744 CCTTG
1 TCTTG
7749 AAACATATGA
Statistics
Matches: 116, Mismatches: 16, Indels: 11
0.81 0.11 0.08
Matches are distributed among these distances:
129 13 0.11
131 22 0.19
133 6 0.05
135 7 0.06
136 68 0.59
ACGTcount: A:0.27, C:0.17, G:0.17, T:0.40
Consensus pattern (129 bp):
TCTTGCTTGAGATATTCTCTCGAAACAGAAGATTTTATCGCTTGATATTTCTCTCGAAACAGAAG
ATTTTACCTCGCTTCAGATAGATTCCCTCGAAACAAAAGATTTTATCTCGCTTGAGATAGTTTC
Found at i:8948 original size:32 final size:33
Alignment explanation
Indices: 8820--9000 Score: 134
Period size: 38 Copynumber: 5.0 Consensus size: 33
8810 TTGAGATAGT
*
8820 TTCCCTCGAAACAGAAGA-TTTGTCTCGCTTGAGATTA
1 TTCCCTCGAAACAGAAGATTTTATCTCGCTT--G---A
*
8857 TTTCCCTCGAAATAGAAGATTTT-TCTCGCTTGAGATA
1 -TTCCCTCGAAACAGAAGATTTTATCTCGCTT--G--A
*
8894 GTTTCCTTCGAAACAGAAGATTTTATCTCGCTTGA
1 --TTCCCTCGAAACAGAAGATTTTATCTCGCTTGA
* *
8929 TTCCCTCGAAATA-TAGATTTTATCTCGCTTAAGATA
1 TTCCCTCGAAACAGAAGATTTTATCTCGCTT--G--A
8965 GTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGA
1 --TTCCCTCGAAACAGAAGATTTTATCTCGCTTGA
9000 T
1 T
9001 ATAGTTTCTC
Statistics
Matches: 124, Mismatches: 9, Indels: 25
0.78 0.06 0.16
Matches are distributed among these distances:
32 16 0.13
33 12 0.10
34 1 0.01
35 2 0.02
36 1 0.01
37 4 0.03
38 61 0.49
39 27 0.22
ACGTcount: A:0.27, C:0.20, G:0.16, T:0.36
Consensus pattern (33 bp):
TTCCCTCGAAACAGAAGATTTTATCTCGCTTGA
Found at i:9523 original size:20 final size:20
Alignment explanation
Indices: 9494--9560 Score: 54
Period size: 20 Copynumber: 3.5 Consensus size: 20
9484 TGCTTGAGAT
*
9494 ATTTTCTCTCGAAACAGAAG
1 ATTTTATCTCGAAACAGAAG
*
9514 ATTTTATCTCG---CTTG-AG
1 ATTTTATCTCGAAAC-AGAAG
* *
9531 ATTTTCTCTTGAAACAGAAG
1 ATTTTATCTCGAAACAGAAG
9551 ATTTTA-CTCG
1 ATTTTATCTCG
9561 CTTGAGATAG
Statistics
Matches: 35, Mismatches: 7, Indels: 11
0.66 0.13 0.21
Matches are distributed among these distances:
17 12 0.34
18 1 0.03
19 4 0.11
20 18 0.51
ACGTcount: A:0.28, C:0.18, G:0.15, T:0.39
Consensus pattern (20 bp):
ATTTTATCTCGAAACAGAAG
Found at i:9735 original size:131 final size:131
Alignment explanation
Indices: 9500--9748 Score: 317
Period size: 131 Copynumber: 1.9 Consensus size: 131
9490 AGATATTTTC
* * *
9500 TCTCGAAACAGAAGATTTTATCTCGCTTGAGATTTTCTCTTGAAACAGAAGATTTTACTCGCTTG
1 TCTCGAAACAGAAGATTTTATCTCGCTTGAGATTTTCTCTCGAAACAGAAGATTTTACTCGCATC
* * * *
9565 AGATAGTTTCCTTGAAACAAAATATTCTATCTCGGTTGATATAGTTTCTCTTGGTTGAGATAGCT
66 AGATAGTTCCCTCGAAACAAAAGATTCTATCTCGGTTGATATAGTTTCCCTTGGTTGAGATAGCT
9630 T
131 T
**
9631 TCTCGAAACAGAAGATTTTAT-TCGCTTGAGATAGTTT-TCATCGAAACAGAA-ATTTTTTTCGC
1 TCTCGAAACAGAAGATTTTATCTCGCTTGAGAT--TTTCTC-TCGAAACAGAAGATTTTACTCGC
* * * *
9693 ATCAGATAGATTCCCTCGAAACAGAAGATT-TTTCTTGTTTGATATAGTTTCCCTTG
63 ATCAGATAG-TTCCCTCGAAACAAAAGATTCTATCTCGGTTGATATAGTTTCCCTTG
9749 AAACATATGA
Statistics
Matches: 101, Mismatches: 13, Indels: 8
0.83 0.11 0.07
Matches are distributed among these distances:
130 11 0.11
131 61 0.60
132 29 0.29
ACGTcount: A:0.28, C:0.16, G:0.17, T:0.39
Consensus pattern (131 bp):
TCTCGAAACAGAAGATTTTATCTCGCTTGAGATTTTCTCTCGAAACAGAAGATTTTACTCGCATC
AGATAGTTCCCTCGAAACAAAAGATTCTATCTCGGTTGATATAGTTTCCCTTGGTTGAGATAGCT
T
Found at i:12221 original size:33 final size:34
Alignment explanation
Indices: 12066--12286 Score: 110
Period size: 38 Copynumber: 6.1 Consensus size: 34
12056 ATTTGTCTCA
*
12066 CTTGAGATAGTTTCCCTCAAAAT-ATATGATTTTATAT
1 CTTGAGATAGTTTCCCTCGAAATGA-AT-A-TTT-TAT
* * **
12103 CCTTGAGATAGTTTCCCTCGAACA-AAAGATTATCTCG
1 -CTTGAGATAGTTTCCCTCGAA-ATGAATATT-T-TAT
* * *
12140 CTTGAGATATTTTCCAAT-GAAACTGAAAATTTTATAT
1 CTTGAGATAGTTTCC-CTCGAAA-TGAATA-TTT-TAT
*
12177 CGCTTGAGATAGTTTCTCTCGAAATAGAAT-TTTTA-
1 --CTTGAGATAGTTTCCCTCGAAAT-GAATATTTTAT
*
12212 CTTGAGATAGTTTCCCTTGAAATGAATATTTTATCTT
1 CTTGAGATAGTTTCCCTCGAAATGAATATTTTA---T
* * *
12249 GCTTGAGATAATTTCCCTCGAAACAGAAGATTTTAT
1 -CTTGAGATAGTTTCCCTCGAAA-TGAATATTTTAT
12285 CT
1 CT
12287 CGCTTGAGCT
Statistics
Matches: 143, Mismatches: 22, Indels: 39
0.70 0.11 0.19
Matches are distributed among these distances:
32 4 0.03
33 26 0.18
35 3 0.02
36 22 0.15
37 12 0.08
38 45 0.31
39 31 0.22
ACGTcount: A:0.31, C:0.16, G:0.14, T:0.39
Consensus pattern (34 bp):
CTTGAGATAGTTTCCCTCGAAATGAATATTTTAT
Found at i:14366 original size:90 final size:90
Alignment explanation
Indices: 14200--14367 Score: 207
Period size: 90 Copynumber: 1.9 Consensus size: 90
14190 TCTCGCTTGA
* * * *
14200 GATATTTTCTTGAAACAGAAGATTTTACCTCGCTTGAGATAGTTCCTTGAAACAAATATTCTATC
1 GATAGTTTCTCGAAACAGAAGATTTTACCTCGCTTGAGATAGTTCATCGAAACAAATATTCTATC
* *
14265 TAGGTTGAGATAGTTTCTCTTGGTT
66 TAGCTTCAGATAGTTTCTCTTGGTT
*
14290 GATAGTTTCTCGAAACAGAAGATTTTA-TTCGCTTGAGATAGTTTTCATCGAAACAGAA-ATT-T
1 GATAGTTTCTCGAAACAGAAGATTTTACCTCGCTTGAGATAG--TTCATCGAAACA-AATATTCT
* *
14352 TTCTCGCTTCAGATAG
63 ATCTAGCTTCAGATAG
14368 ATTCCCTCGA
Statistics
Matches: 66, Mismatches: 9, Indels: 6
0.81 0.11 0.07
Matches are distributed among these distances:
89 13 0.20
90 38 0.58
91 13 0.20
92 2 0.03
ACGTcount: A:0.29, C:0.15, G:0.18, T:0.38
Consensus pattern (90 bp):
GATAGTTTCTCGAAACAGAAGATTTTACCTCGCTTGAGATAGTTCATCGAAACAAATATTCTATC
TAGCTTCAGATAGTTTCTCTTGGTT
Found at i:16660 original size:91 final size:93
Alignment explanation
Indices: 16524--16703 Score: 253
Period size: 91 Copynumber: 2.0 Consensus size: 93
16514 TTTATCCCTT
* * *
16524 GAGATTTTTCTCGAAATAGAAGATTTTCTCGCTTGAGATAGTTTCCTCAAAATA-AAGATTTTAT
1 GAGATTGTTCTCGAAATAGAAGATTTTCTCACTTGAGATAGTTTCCTCAAAACAGAAGATTTTAT
16588 CTTGCTTGAGAT-TTTCCCTCGAAATTTTA
66 C--GCTTGAGATATTTCCCTCGAAATTTTA
* *
16617 GAGATTGTT-TCGAAATAG-A-TTTTATCTCACTTGAGATAGTTTCCTCGAAACAGAAGATTTTA
1 GAGATTGTTCTCGAAATAGAAGATTT-TCTCACTTGAGATAGTTTCCTCAAAACAGAAGATTTTA
16679 TCGCTTGAGATATTTCCCTCGAAAT
65 TCGCTTGAGATATTTCCCTCGAAAT
16704 AGAAGATTTT
Statistics
Matches: 79, Mismatches: 5, Indels: 8
0.86 0.05 0.09
Matches are distributed among these distances:
90 12 0.15
91 39 0.49
92 20 0.25
93 8 0.10
ACGTcount: A:0.29, C:0.16, G:0.16, T:0.39
Consensus pattern (93 bp):
GAGATTGTTCTCGAAATAGAAGATTTTCTCACTTGAGATAGTTTCCTCAAAACAGAAGATTTTAT
CGCTTGAGATATTTCCCTCGAAATTTTA
Found at i:16966 original size:67 final size:67
Alignment explanation
Indices: 16651--17037 Score: 225
Period size: 69 Copynumber: 5.7 Consensus size: 67
16641 TCTCACTTGA
*
16651 GATAGTTT-CCTCGAAACAGAAGATTTTA--TCGCTTGAGATA-TTTCCCTCGAAATAGAAGATT
1 GATAGTTTCCCTCG-AA-AGAA-ATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG-AGA-T
16712 TTATCTCGCTT
61 TT-T-T--CTT
16723 GAGATAGTTTCCCTCGAAACAGAAGATTTTA--TCGCTT--GATA-TTT-CCTCGAAA-A-AGAT
1 --GATAGTTTCCCTCG-AA-AGAA-ATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAGA-
16780 TTTATCTCGCTT
60 TTT-T-T--CTT
*
16792 GAGATAGTTTCCCTCGAAACAGAAGATTTTATCT--CTTGATATAGTTT--CTCGAAACAGAAGA
1 --GATAGTTTCCCTCG-AA-AGAA-ATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG-AGA
*
16853 TTTTGCTT
60 TTTTTCTT
16861 GAGATAGTTTCCCTCGAAAGAAATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAGATTTT
1 --GATAGTTTCCCTCGAAAGAAATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAGATTTT
16926 TCTT
64 TCTT
* *
16930 GATA-TTTCCCTCG-AAGTAGAATTTTGT-TCTGCTTGAGATAG-TTCCCTC--AATAGAGATTT
1 GATAGTTTCCCTCGAAAG-A-AATTTTATCTC-GCTTGAGATAGTTTCCCTCGAAACAGAGATTT
16989 TCTCTT
63 T-TCTT
* *
16995 GA-AGATATTTCCTCG--A-ACATTTT-TCTCGCTTGAGATAGTTTCC
1 GATAG-T-TTCCCTCGAAAGAAATTTTATCTCGCTTGAGATAGTTTCC
17038 TTAAATATAA
Statistics
Matches: 283, Mismatches: 8, Indels: 55
0.82 0.02 0.16
Matches are distributed among these distances:
62 12 0.04
63 11 0.04
64 13 0.05
65 9 0.03
66 30 0.11
67 33 0.12
68 14 0.05
69 79 0.28
70 10 0.04
71 12 0.04
72 13 0.05
73 10 0.04
74 11 0.04
75 26 0.09
ACGTcount: A:0.27, C:0.18, G:0.17, T:0.37
Consensus pattern (67 bp):
GATAGTTTCCCTCGAAAGAAATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAGATTTTTC
TT
Found at i:17053 original size:99 final size:101
Alignment explanation
Indices: 16950--17197 Score: 223
Period size: 99 Copynumber: 2.4 Consensus size: 101
16940 TCGAAGTAGA
* *
16950 ATTTTGTTCTGCTTGAGATAG-TTCCCTCAATAGA-GATTT-TCTCTTGAAGATATTTC-CTCGA
1 ATTTTG-TCTGCTTGAGATAGTTTCCCTCAA-ACATAATTTATCTCTTG-AGA-ATTTCTCTCGA
*
17011 ACAT-TTTT-CTCGCTTGAGATAGTTT-CCTTAAATATAAC
62 A-ATATTTTCCTCGCTTGAGATAGTTTCCCTCAAATATAAC
* *
17049 ATTTTATCTCGCTTGAGA-AGTTTCCCTTAAACATAATTTATCTCTTGAGAATTTCTCTCGAAAT
1 ATTTTGTCT-GCTTGAGATAGTTTCCCTCAAACATAATTTATCTCTTGAGAATTTCTCTCGAAAT
*
17113 AGAAGATTTTGCCTCGCTTGAGATAGTTTCCCTCAAATATAAG
65 -----ATTTT-CCTCGCTTGAGATAGTTTCCCTCAAATATAAC
*
17156 ATTTTGTCTTGCTTGAGAT--TTT-CCTCGTAACA-AATTTATCTC
1 ATTTTGTC-TGCTTGAGATAGTTTCCCTC-AAACATAATTTATCTC
17198 CCTTGAGATG
Statistics
Matches: 123, Mismatches: 9, Indels: 28
0.77 0.06 0.17
Matches are distributed among these distances:
98 14 0.11
99 34 0.28
100 7 0.06
104 4 0.03
105 13 0.11
106 24 0.20
107 26 0.21
108 1 0.01
ACGTcount: A:0.26, C:0.19, G:0.14, T:0.42
Consensus pattern (101 bp):
ATTTTGTCTGCTTGAGATAGTTTCCCTCAAACATAATTTATCTCTTGAGAATTTCTCTCGAAATA
TTTTCCTCGCTTGAGATAGTTTCCCTCAAATATAAC
Found at i:17096 original size:32 final size:36
Alignment explanation
Indices: 17010--17103 Score: 103
Period size: 37 Copynumber: 2.7 Consensus size: 36
17000 TATTTCCTCG
*
17010 AACATTTT-TCTCGCTTGAGATAGTTT-CCTTAAATAT
1 AACATTTTATCTC-CTTGAGA-AGTTTCCCTTAAACAT
17046 AACATTTTATCTCGCTTGAGAAGTTTCCCTTAAACAT
1 AACATTTTATCTC-CTTGAGAAGTTTCCCTTAAACAT
17083 -A-A-TTTATCT-CTTGAGAA-TTTC
1 AACATTTTATCTCCTTGAGAAGTTTC
17104 TCTCGAAATA
Statistics
Matches: 55, Mismatches: 1, Indels: 9
0.85 0.02 0.14
Matches are distributed among these distances:
31 4 0.07
32 8 0.15
34 7 0.13
35 1 0.02
36 14 0.25
37 21 0.38
ACGTcount: A:0.29, C:0.18, G:0.11, T:0.43
Consensus pattern (36 bp):
AACATTTTATCTCCTTGAGAAGTTTCCCTTAAACAT
Found at i:20672 original size:22 final size:22
Alignment explanation
Indices: 20647--20712 Score: 61
Period size: 22 Copynumber: 3.2 Consensus size: 22
20637 TGTCTCGCTT
20647 AAGATAGTTTCCCTCGAAACAG
1 AAGATAGTTTCCCTCGAAACAG
** * *
20669 AAGAT--TTTTTCTTG---CAT
1 AAGATAGTTTCCCTCGAAACAG
20686 AAGATAGTTTCCCTCGAAACAG
1 AAGATAGTTTCCCTCGAAACAG
20708 AAGAT
1 AAGAT
20713 TTTTTCTCGC
Statistics
Matches: 31, Mismatches: 8, Indels: 10
0.63 0.16 0.20
Matches are distributed among these distances:
17 7 0.23
19 6 0.19
20 6 0.19
22 12 0.39
ACGTcount: A:0.35, C:0.18, G:0.17, T:0.30
Consensus pattern (22 bp):
AAGATAGTTTCCCTCGAAACAG
Found at i:21830 original size:20 final size:20
Alignment explanation
Indices: 21768--21830 Score: 56
Period size: 20 Copynumber: 3.2 Consensus size: 20
21758 GATAGTTTCC
21768 CTCGAAACAGAAGATTTTTT
1 CTCGAAACAGAAGATTTTTT
**** * **
21788 CTCGTTTGAG-ATATTTTCC
1 CTCGAAACAGAAGATTTTTT
21807 CTCGAAACAGAAGATTTTTT
1 CTCGAAACAGAAGATTTTTT
21827 CTCG
1 CTCG
21831 CTTGAGATAG
Statistics
Matches: 28, Mismatches: 14, Indels: 2
0.64 0.32 0.05
Matches are distributed among these distances:
19 12 0.43
20 16 0.57
ACGTcount: A:0.27, C:0.19, G:0.16, T:0.38
Consensus pattern (20 bp):
CTCGAAACAGAAGATTTTTT
Found at i:22500 original size:67 final size:65
Alignment explanation
Indices: 22398--22528 Score: 181
Period size: 67 Copynumber: 2.0 Consensus size: 65
22388 ACGAAACAGA
* * * * *
22398 AGATTTTATCTCGCTTGAGATGGTTTCCTCGAAACAGAAGATTTTGTTTCGCTTGAGATAGTTTG
1 AGATTTTATCTCACTTGAGATAGTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTG
* *
22463 AGATTTTTTGCTCACTTGAGATAGTTCCCTTCGAAACAGAAGATTTTATCTCGTTTGAGATAGTT
1 AGATTTTAT-CTCACTTGAGATAGTTCCC-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
22528 T
64 T
22529 TTCTTGAAAC
Statistics
Matches: 57, Mismatches: 7, Indels: 2
0.86 0.11 0.03
Matches are distributed among these distances:
65 8 0.14
66 16 0.28
67 33 0.58
ACGTcount: A:0.24, C:0.15, G:0.21, T:0.40
Consensus pattern (65 bp):
AGATTTTATCTCACTTGAGATAGTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTG
Found at i:26427 original size:22 final size:22
Alignment explanation
Indices: 26364--26428 Score: 59
Period size: 22 Copynumber: 3.2 Consensus size: 22
26354 ATATTGCTTG
26364 AGATAGTTTCCCTCGAAACAGA
1 AGATAGTTTCCCTCGAAACAGA
** **
26386 AGAT--TTTATCTCG---CTTA
1 AGATAGTTTCCCTCGAAACAGA
26403 AGATAGTTTCCCTCGAAACAGA
1 AGATAGTTTCCCTCGAAACAGA
26425 AGAT
1 AGAT
26429 TTTATCTCGC
Statistics
Matches: 30, Mismatches: 8, Indels: 10
0.62 0.17 0.21
Matches are distributed among these distances:
17 6 0.20
19 7 0.23
20 7 0.23
22 10 0.33
ACGTcount: A:0.34, C:0.20, G:0.17, T:0.29
Consensus pattern (22 bp):
AGATAGTTTCCCTCGAAACAGA
Found at i:27085 original size:19 final size:19
Alignment explanation
Indices: 27061--27097 Score: 65
Period size: 19 Copynumber: 1.9 Consensus size: 19
27051 ATTTTATCTC
*
27061 GGTTGAGATAGTTTCTCTT
1 GGTTGAGATAGCTTCTCTT
27080 GGTTGAGATAGCTTCTCT
1 GGTTGAGATAGCTTCTCT
27098 CGAAACAGAA
Statistics
Matches: 17, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
19 17 1.00
ACGTcount: A:0.16, C:0.14, G:0.27, T:0.43
Consensus pattern (19 bp):
GGTTGAGATAGCTTCTCTT
Found at i:27158 original size:97 final size:97
Alignment explanation
Indices: 26985--27168 Score: 244
Period size: 97 Copynumber: 1.9 Consensus size: 97
26975 TTTATCTCGC
** * * *
26985 TTGAGATATTTTCTCTTGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCTTTGAAACAAAA
1 TTGAGATAGCTTCTCTCGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCATCGAAACAAAA
* *
27050 TATTTTATCTCGGTTGAGATAGTTTCTCTTGG
66 TATTTTATCTCGCTTCAGATAGTTTCTCTTGG
** * *
27082 TTGAGATAGCTTCTCTCGAAACAGAAGATTTTATTTCTCTTGAGATAGTTTTCATCGAAACAAAA
1 TTGAGATAGCTTCTCTCGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCATCGAAACAAAA
*
27147 -ATTTTTTTCTCGCTTCAGATAG
66 TA-TTTTATCTCGCTTCAGATAG
27169 ATTCCCTCGA
Statistics
Matches: 74, Mismatches: 12, Indels: 2
0.84 0.14 0.02
Matches are distributed among these distances:
96 1 0.01
97 73 0.99
ACGTcount: A:0.28, C:0.15, G:0.16, T:0.40
Consensus pattern (97 bp):
TTGAGATAGCTTCTCTCGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCATCGAAACAAAA
TATTTTATCTCGCTTCAGATAGTTTCTCTTGG
Found at i:27191 original size:136 final size:135
Alignment explanation
Indices: 26946--27216 Score: 330
Period size: 136 Copynumber: 2.0 Consensus size: 135
26936 TTTATCTTAC
**
26946 TTGAGATATTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCTCTTGAAACAGAA
1 TTGAGATAGCTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCTC-TGAAACAGAA
* * * * * * *
27011 GATTTTACCTCGCTTGAGATAGTTTCCTTTGAAACAAAATATTTTATCTCGGTTGAGATAGTTTC
65 AATTTTACCTCGCTTCAGATAGATTCCCTCGAAACAAAAGATTTTATCTCGCTTGAGATAGTTTC
*
27076 TCTTGG
130 CCTTGG
* *
27082 TTGAGATAGCTTCTCTCGAAACAGAAGATTTTATTTCTCTTGAGATAGTTTTCATC-GAAACA-A
1 TTGAGATAGCTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATA-TTTTC-TCTGAAACAGA
** * * * *
27145 AAATTTTTTTCTCGCTTCAGATAGATTCCCTCGAAACAGAAGATTTTTTCTTGCTTGATATAGTT
64 AAA-TTTTACCTCGCTTCAGATAGATTCCCTCGAAACAAAAGATTTTATCTCGCTTGAGATAGTT
27210 TCCCTTG
128 TCCCTTG
27217 AAACATATGA
Statistics
Matches: 114, Mismatches: 18, Indels: 6
0.83 0.13 0.04
Matches are distributed among these distances:
135 3 0.03
136 104 0.91
137 5 0.04
138 2 0.02
ACGTcount: A:0.27, C:0.17, G:0.16, T:0.40
Consensus pattern (135 bp):
TTGAGATAGCTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCTCTGAAACAGAAA
ATTTTACCTCGCTTCAGATAGATTCCCTCGAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
CTTGG
Found at i:27210 original size:175 final size:175
Alignment explanation
Indices: 26907--27249 Score: 426
Period size: 175 Copynumber: 2.0 Consensus size: 175
26897 TTTATCTCGC
* * *
26907 TTGAGATAGTTTCCCATGAAACAGAATATTTTATCTTACTTGAGATATTTTCTCTCGAAACAGAA
1 TTGAGATAGCTTCCCATGAAACAGAAGATTTTATCTTACTTGAGATATTTTCTATCGAAACAGAA
* * ** * *
26972 GATTTTATCTCGCTTGAGATATTTTCTCTTGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTC
66 AATTTTATCTCGCTTCAGATAGATTCCCTCGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTC
*
27037 CTTTGAAACAAAAT-ATTTTATCTCGGTTGAGATAGTTTCTCTTGG
131 CCTTGAAAC-AAATGATTTTATCTCGGTTGAGATAGTTTCTCTTGG
* *
27082 TTGAGATAGCTTCTC-TCGAAACAGAAGATTTTAT-TTCTCTTGAGATAGTTTTC-ATCGAAACA
1 TTGAGATAGCTTCCCAT-GAAACAGAAGATTTTATCTT-ACTTGAGATA-TTTTCTATCGAAACA
* ** * *
27144 -AAAATTTTTTTCTCGCTTCAGATAGATTCCCTCGAAACAGAAGATTTTTTCTTGCTTGATATAG
63 GAAAA-TTTTATCTCGCTTCAGATAGATTCCCTCGAAACAGAAGATTTTACCTCGCTTGAGATAG
* * *
27208 TTTCCCTTGAAACATATGATTTTGTCTCGTTTGAGATAGTTT
127 TTTCCCTTGAAACAAATGATTTTATCTCGGTTGAGATAGTTT
27250 TTCTCAAAAC
Statistics
Matches: 143, Mismatches: 20, Indels: 10
0.83 0.12 0.06
Matches are distributed among these distances:
174 9 0.06
175 129 0.90
176 5 0.03
ACGTcount: A:0.28, C:0.16, G:0.16, T:0.41
Consensus pattern (175 bp):
TTGAGATAGCTTCCCATGAAACAGAAGATTTTATCTTACTTGAGATATTTTCTATCGAAACAGAA
AATTTTATCTCGCTTCAGATAGATTCCCTCGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTC
CCTTGAAACAAATGATTTTATCTCGGTTGAGATAGTTTCTCTTGG
Found at i:27244 original size:214 final size:214
Alignment explanation
Indices: 26883--37989 Score: 2096
Period size: 195 Copynumber: 54.9 Consensus size: 214
26873 ATTGTTTCAA
* *
26883 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACAGAATATTTTATCTTACTT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACAAAATATTTTATCTCACTT
* ** * * *
26948 GAGATATTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCTCTTGAAACAGAAGA
66 CAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAGA
* * *
27013 TTTTACCTCGCTTGAGATAGTTTCCTT-T-GAAACAAAATATTTTATCTCGGTTGAGATAGTTTC
131 TTTTACCTCGCTTGAGATAGTTT--TTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTC
*
27076 TCTTGGTTGAGATAGCTTCTC
194 CCTTGGTTGAGATAGCTTCTC
* * * * *
27097 TCGAAACAGAAGATTTTATTTCTCTTGAGATAGTTT-TCATCGAAACAAAA-ATTTTTTTCTCGC
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATA-TTTTATCTCAC
* * * * *
27160 TTCAGATAGATTCCCTCGAAACAGAAGATTTTTTCTTGCTTGATATAGTTTCCCTTGAAACATAT
64 TTCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAA
** * *
27225 GATTTTGTCTCGTTTGAGATAGTTTTTCTCAAAACAGAAGATTTTATCTCGCTTGAGATAGTTTC
129 GATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTC
27290 CC----TTGA-A-A-------
194 CCTTGGTTGAGATAGCTTCTC
* * * *
27298 T------AGAAGATTTTGTCTCGCTTGAGATTA-TTTCCC-TCGAAACAGAAGAGTTTT-TCTCG
1 TCGAAACAGAAGATTTTATCTCGCTTGAGA-TAGTTTCCCAT-GAAACAAAATA-TTTTATCTCA
* * * * * *
27354 CTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCTT--G--A--TTCCCTCGAAATATA
63 CTTCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGA
* * ** * *
27413 AGATTTTATCTCGCTTAAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTT--GATA----
128 AGATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTT
27472 --------T-AG-T---TTCTC
193 CCCTTGGTTGAGATAGCTTCTC
* * * *
27481 TCGAAACAGAAGATTTTATATCGCTTGAGATAGTTTCCC-TCGAAACATAAGATTTTATCTCGCT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
* * * * * * * * *
27545 TGAGATAGTTTCCCTAGAAACAGAAGATTTTGTCTTGCTTGGGATAGTTTCCCTCGAAATAGAAT
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
** * ** * * * * *
27610 ATTTTGTCTCGCTTGAGATAGGTTCCCTCGAAACAGAAGAATTTATCTCACTTAAGATA------
130 ATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
27669 --T--TT----TA----C-C
195 CTTGGTTGAGATAGCTTCTC
* * * * * *
27676 TCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTT-CCTTCGAAATATAACATTTTATCTCGCT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
* * ** * * * * * * *
27740 TGAGATAGTTTCCCTTAAAACAGAATATTTTATCTCACTTGAGAAAATTTCTCTCGAAATAGAA-
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
** ** * * * *
27804 ATTTTGTCTCGCTTGAGATAGTTTCCCTCAAAATATAAGATTTTGTCTTGCTTGAGATA------
130 ATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
27863 ----GTT----T--C--C-C
195 CTTGGTTGAGATAGCTTCTC
* * * * * * *
27870 TCGTAACAGAAGATTTTATCTCCCTTGAGATTGTTT-CAATCGAAACAGAAGATTTTATCTCGCT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
* * * * * * *
27934 TGAGATAGTTTCCCAT-GAAACAGAATATTTTATCTTGCTTGAGATATTTTCTCTCGAAACAGAA
65 TCAGATAGATTCCC-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAA
* ** * *
27998 GATTTTATCTCGCTTGAGATA-TTTTCTCTTGAAACAGAAGATTTTACCTCGCTTGAGATAGTTT
129 GATTTTACCTCGCTTGAGATAGTTTT-TCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTT
* **** *
28062 CCTTTGAAACAAAATA--TTCTATC
193 CCCTTG-GTTGAGATAGCTTC--TC
**** * * * * * *
28085 TCGGTTGAGATAG--TTTCTCT-G-GTGAGATAGCTTT-TC-TCGAAACAAAAGATTTTATTTCG
1 TCGAAACAGA-AGATTTTATCTCGCTTGAGATAG-TTTCCCAT-GAAACAAAATATTTTATCTCA
* * * * * * * *
28144 CTTGAGATAGTTTTCATCGAAACAGAA-ATTTTTTTCTCGCTTCAGATAGATTCCCTCGAAACAG
63 CTTCAGATAGATTCCCTCGAAACAGAAGA-TTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAG
** * * ** ** * * *
28208 AAGATTTTTTCTTGCTTGATATAGTTTCCCTTGAAACATATGATTTTGTCT--C-------A---
127 AAGATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTT
* *
28261 -----T--TTGAGATAGTTTTTC
192 TCCCTTGGTTGAGATAGCTTCTC
* * * * * *
28277 TCAAAACAAAAGATTTTATCTC-CATTGAGATAGTTTCCC-TCGAAACAGAAGATTTTGTCTCGC
1 TCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCAC
* * * *
28340 -T----T-GATTCCCTCGAAATATAAGATTTTATCTCGCTTAAGATAGTTTCCCTCGAAACAGAA
64 TTCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAA
* * * * * *
28399 GATTTTATCTCGCTTGATATAGTTTCTCTCGAAACAGAAGATTTTATATCGCTTGAGATA-----
129 GATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTC
28459 -----GTT----T--C--C-C
194 CCTTGGTTGAGATAGCTTCTC
* * * * **
28466 TCGAAACATAAGATTTTATCTCGCTTGAGATAGTTTCCC-TCGAAACAGAAGATTTTGTCTTGCT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
** * * * * *** * *
28530 TGGGATAGTTTCCCTCGAAACAGAAGATTTTGTCTCGCATGAGATAGTTTCTCACAAAATAGAAT
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
** * ** *
28595 ATTTTGTCTTGCTTGAGATAGTTTCCCTCAAAACAGAAGATTTTATCTC-CTTTGAGATA-----
130 ATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGC-TTGAGATAGTTTC
28654 -----GTT----T--C--C-C
194 CCTTGGTTGAGATAGCTTCTC
* * * ** *
28661 TCGAAACAAAATATTTTATCTCGCTTGAGATAGTTACCTTTGAAACAAAATATTTTATCTC-GTT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACAAAATATTTTATCTCACTT
* ** * * * ** *
28725 AAAGATAG-TTATACTCGAAACAGAAGATTTTGTCTCGCTTGAGATGGTTTCTCTCAAAATAGAA
66 -CAGATAGATT-CCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAA
** * ** * *
28789 GATTTTGTCTCACTTGAGATAGTTTCCCTCAAAACATATGATTTTATCTC-CTTTGAGATA----
129 GATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGC-TTGAGATAGTTT
28849 --C----TT----T--C--C-C
193 CCCTTGGTTGAGATAGCTTCTC
* * * * * *
28856 TCGAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCCC-TAAAATAGAATATATTTAACTCGCT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACAAAATAT-TTTATCTCACT
* * * * ** * *
28920 TGAGATAGTTTCTCTCGAAATAGAAGATTTTGCCTCGCTAT-AGATAGTTTCACTCT-AAATAGA
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCT-TGAGATAGTTTCCCT-TGAAACAGA
* * ** * *
28983 ATATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAAAAGATTTTGTCTCGCTTGAGATAGTTT
128 AGATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTT
29048 -CC------------G------
193 CCCTTGGTTGAGATAGCTTCTC
* * * * *
29051 TCGAAACAGAACATTTTATCTCGCTTGAGATTA-TGTCGC-TCGAAACAGAAGATTTTATCTCTA
1 TCGAAACAGAAGATTTTATCTCGCTTGAGA-TAGTTTCCCAT-GAAACAAAATATTTTATCTC-A
* * * * * * * *
29114 -TTGAGATAGTTTCCCTCGAAATAGAAGATTTTATCTCGCTTGATACACTTTCCCTCGAAACAAA
63 CTTCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGA
* ** * * * *
29178 AGATTTT-CTCTCGTTTGAGATAGTTTCCCACGAAACAGAAGATTTTATCTCGCTTGAGATGGTT
128 AGATTTTAC-CTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTT
* *** * * *
29242 T-CCTCGAAACAGAAGATTTTGTTTCGC
192 TCCCTTG--GTTG-AGA--TAGCTTCTC
* * * * * * * * *
29269 TTGAGATAGTTTGAGATTTTTTGCTCACTTGAGATAG-TTCCCTTCGAAACAGAAGATTTTATCT
1 TCGAAACAG---AAGATTTTAT-CTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCT
** * * ** * * * ** *
29333 CGTTTGAGATAGTTTTTCTTGAAACAAAATATTTTATCTCGCTAAAGATAGTTTCCCTCGAAACA
61 CACTTCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACA
** * * * *
29398 GAAGATTTTGTCTCGCATGAGATAGTTTCTCTC--AA-AATAGA----ATAT---TT----T-G-
126 GAAGATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGT
* * *
29447 -T--CTTGCTTGAGATAGTTTCCC
191 TTCCCTTGGTTGAGATAGCTTCTC
* *
29468 TCAAAACAGAAGATTTTATCTC-CTTTGAGATAGTTTCCC-TCGAAACAAAATATTTTATCTCGC
1 TCGAAACAGAAGATTTTATCTCGC-TTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCAC
* * * ** *
29531 TTGAGATA-ATTTCCCAT-GAAACTGAAGATTTTA--TCACTTGAGATAGTTTCCAATGAAACAA
64 TTCAGATAGA-TTCCC-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAG
* * * * * * *
29592 AATATTTTATCTCGCTTGAGATAGTTTCTCTCGAAATAGAAGATTTTATATCGCTTGAGATA---
127 AAGATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTT
29654 -------GTT----T-GC--CT-
192 TCCCTTGGTTGAGATAGCTTCTC
* ** * * * *
29662 T-GAAACAGAATATTTTATCTTACTTGAGATACTTTCCC-TCGAAACAGAAGATTTTATCTCGCT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
* * * * ** *
29725 TGAGATAGTTTCCCTTGAAACAGAAGATTTTATCTCGCTTGAGATAGATTCCCACGAAACATAAG
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
* * * ** ** *
29790 AATTTATCTTGCTTGAGATAGTTTCACTTGAAAC--AA-A--TTAT-T---TT-ATATAG-----
130 ATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
* *
29840 C----TTGAGATAGTTTCCC
195 CTTGGTTGAGATAGCTTCTC
* * * * *** * *
29856 TCGAAACAGAAGATTTTTTCTCTCTTGAGAAAGTTTCCCTTGAAATTGAAGATTTT-TCTCGCTT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACAAAATATTTTATCTCACTT
* * * ** * * * *
29920 AAGAT-GTTTTCCCTCAAAATTGAAGATCTTATATCGCTTGAGATAGTTTCCCTCGAAACAGAGG
66 CAGATAG-ATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
* * * * ** ** * *
29984 ATTTTATCGCGGTTGAGATCGTTTCCCTCGAAAA-TTAAGATTTTATATTGCTTGAGATA-----
130 ATTTTACCTCGCTTGAGATAGTTTTTCTC-AAAACAAAAGATTTTATCTCGCTTGAGATAGTTTC
30043 -----G-T----T---TTC-C
194 CCTTGGTTGAGATAGCTTCTC
* * * * * *
30050 TCGGAATAGAAGATTTTATCTCGCTTGAGATAGTTTCCC-TCAAAACAGAAGATTTTATCTCGCT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
* * * ** * *
30114 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATATCGCTTGAGATAGTTTCCCTCAAAATAGATG
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
* * * ****** * * **** *
30179 ATTTTATCTCGGTTGAGATAGTTTCTCTTGGTTGAGATAG-CTTT-TCTCGAAACA-AAAGATTT
130 ATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACA-AAAGATTTTATCTCGCTTGAGATAG-TTT
*** * *
30241 TATTTCGCTTGAGATAG-TTTTC
193 CCCTT-GGTTGAGATAGCTTCTC
* * * * * * **
30263 ATCGAAACAGAA-ATTTTTTTCTCGCTTCAGATAGATTCCC-TCGAAACAGAAGATTTTTTCTTG
1 -TCGAAACAGAAGA-TTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCA
* * * * * * * ** ** **
30326 CTTGATATAGTTTCCCTTGAAACATATGATTTTGTCTCATTTGAGATAGTTTTTCTCAAAACAGA
63 CTTCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGA
* * ** * * *
30391 AGATTTTATCTCCCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTGTCTCGCTTGAG--A----
128 AGATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTT
*
30450 -------TT---AT---TTCCC
193 CCCTTGGTTGAGATAGCTTCTC
* * * * * *
30459 TCGAAATAGAAGATTTTTTCTCGCTTGAGATAGTTT-CCTTCGAAACAGAAGATTTTATCTCGC-
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
* * * *
30522 T----T-GATTCCCTCGAAATATAAGATTTTATCTCGCTTAAGATAGTTTCCCTCGAAACAGAAG
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
* * * * * *
30582 ATTTTATCTCGCTTGATATAGTTTCTCTCGAAACAGAAGATTTTATATCGCTTGAGATA------
130 ATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
30641 ----GTT----T--C--C-C
195 CTTGGTTGAGATAGCTTCTC
* * * **
30648 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCC-TCGAAACAGAAGATTTTGTCTTGCT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
** * * * * * *
30712 TGGGATAGTTTCCCTCGAAATAGAATATTTTGTCTCGCTTGAGATAGGTTCCCTCGAAACAGAAG
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
* * * * * * * *
30777 AATTTATCTCACTTCAGATA-TTTTACCTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTT-
130 ATTTTACCTCGCTTGAGATAGTTTT-TCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTC
* *
30840 CC-T--TCGA-A-A-----TA
194 CCTTGGTTGAGATAGCTTCTC
* * *
30851 T---AAC-----ATTTTATCTCGCTTGAGATAGTTTCCCTTAAAACAGAATATTTTATCTCACTT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACAAAATATTTTATCTCACTT
* * * * * ** * *
30908 GAGA-AAATTTCTCTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGTTTCCCTCAAAATATAAG
66 CAGATAGA-TTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
** * ** ** * * *
30972 ATTTTGTCTTGCTTGAGATAGTTTCCCTCGTAACAGAAGATTTTATCTCCCTTGAGATTGTTT--
130 ATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
31035 C---------A-A-------
195 CTTGGTTGAGATAGCTTCTC
* **
31038 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACAGAATATTTTATCTTGCTT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACAAAATATTTTATCTCACTT
* ** * * *
31103 GAGATATTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCTCTTGAAACAGAAGA
66 CAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAGA
* * * * *
31168 TTTTACCTCGTTTGAGATAGTTTCCTT-T-GAAACAAAATATTCTATCTCGGTTGAGATAGTTTC
131 TTTTACCTCGCTTGAGATAGTTT--TTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTC
* *
31231 TCTTGGTTGAGATAGCTTTTC
194 CCTTGGTTGAGATAGCTTCTC
* * * *
31252 TCGAAACAGAAGATTTTATTTCGCTTGAGATAGTTT-TCATCGAAACAGAAAT-TTTTTTCTCGC
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACA-AAATATTTTATCTCAC
* * * * *
31315 TTCAGATAGATTCCCTCGAAACAGAAGATTTTTTCTTGCTTGATATAGTTTCCCTTGAAACATAT
64 TTCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAA
** ** * *
31380 GATTTTGTCTCATTTGAGATAGTTTTTCTCAAAACAGAAGATTTTATCTCACTTGAGATA-----
129 GATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTC
31440 -----GTT----T--C--C-C
194 CCTTGGTTGAGATAGCTTCTC
* * * * * * *
31447 TCGAAACAGAAGATTTTGTCTCGCTTGAGATTA-TTTCCC-TCAAAATAGAAGATTTTTTCTCGC
1 TCGAAACAGAAGATTTTATCTCGCTTGAGA-TAGTTTCCCAT-GAAACAAAATATTTTATCTCAC
* * * * * * *
31510 TTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCACTT--G--A--TTCCCTCGAAATATAA
64 TTCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAA
* * ** * *
31569 GATTTTATCTCGCTTAAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGATATTCTCTC
129 GATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTG--A-------
* ** * * *
31634 GAAACAGAAGATTT-TATATCGCTTGAGATAGTTTCCC
185 G----A-TAG-TTTCCCT-T-GGTTGAGATAGCTTCTC
* * * ** *
31671 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCC-TCGAAACAGAAGATTTTGTCTTGCA
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
** * ** * * * *
31735 TGGGATAGTTTCCCTCGAAGTAGAATATTTTGTCTCGCTTGAGATAGGTTCCCTCGAAACAGAAG
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
* * * * * * * *
31800 AATTTATCTCACTTAAGATA-TTTTACCTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTT-
130 ATTTTACCTCGCTTGAGATAGTTTT-TCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTC
* *
31863 CC-T--TCGA-A-A-----TA
194 CCTTGGTTGAGATAGCTTCTC
* * *
31874 T---AAC-----ATTTTATCTCGCTTGAGATAGTTTCCCTTAAAACAGAATATTTTATCTCACTT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACAAAATATTTTATCTCACTT
* * * * * ** * *
31931 GAGA-AAATTTCTCTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGTTTCCCTCAAAATATAAG
66 CAGATAGA-TTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
** * ** ** * * *
31995 ATTTTGTCTTGCTTGAGATAGTTTCCCTCGTAACAGAAGATTTTATCTCCCTTGAGATTGTTT--
130 ATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
32058 C---------A-A-------
195 CTTGGTTGAGATAGCTTCTC
* * * **
32061 TCGAAACAGAAGATTTCATATCGCTTGAGATAGTTTCCCATGAAACAGAATATTTTATCTTGCTT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACAAAATATTTTATCTCACTT
* ** * * *
32126 GAGATATTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCTCTTGAAACAGAAGA
66 CAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAGA
* * *
32191 TTTTACCTCGCTTGAGATAGTTTCCTT-T-GAAACAAAATATTTTATCTCGGTTGAGATAGTTTC
131 TTTTACCTCGCTTGAGATAGTTT--TTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTC
* *
32254 TCTTGGTTGAGATAGCTTTTC
194 CCTTGGTTGAGATAGCTTCTC
* * * * * *
32275 TCCAAATAGAAGATTTTATTTCGCTTGAGATAGTTT-TCATCGAAACATAAAT-TTTTTTCTCGC
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACA-AAATATTTTATCTCAC
* * * * *
32338 TTCAGATAGATTCCCTCGAAACAGAAGATTTTTTCTTGCTTGATATAGTTTCCCTTGAAACATAT
64 TTCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAA
** * * *
32403 GATTTTGTCTCGTTTGAGATAGTTTTTCTCAAAACAGAAGATTTTATCTCGCATGAGATAGTTTC
129 GATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTT-
*** *
32468 CCTCGAAACAAAAGATTTTGTCTCGCTTGAGATTATTTCCC
193 -C-C----C--------TTG----G-TTGAGATAGCTTCTC
* * * * * * * *
32509 TCAAAACAGAAGATTTTTTCTCGCTTGATATAGTTT-CCTTCGAAATAGAAGATTTTATCTCGC-
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
* * * *
32572 T----T-GATTCCCTCGAAATATAAGATTTTTTCTCGCTTGAGATAGTTTCCCATGAAACAGAAG
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
* * * *
32632 ATTTTATCTCGCTTGAGATAGTTTCTT-TCGAAATAGAAG-----AT-T---TT---ATA-TTT-
130 ATTTTACCTCGCTTGAGATAGTTT-TTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTC
* *
32682 -C----TTGAGATAGTTTCCC
194 CCTTGGTTGAGATAGCTTCTC
* * ** * * * * *
32698 TTGAAACATAATTTTTTATCTTGCTTGAGATACTTTCCC-TCCAAAAAAGAAGATTTTATCT-AG
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAA-AATATTTTATCTCA-
** * * * * ** *
32761 CTTGTGATAGTTTCCCTAGAAACAGAAGATTTTATCTCGCTTGAGATAGATACCCACGAAATAGA
63 CTTCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGA
* * *** ** *
32826 AGATTTTATCTTGCTTGAGATAGTTTCAATTGAAACAAAATATTTTATCTCGCTTGAG--A----
128 AGATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTT
32885 ---TT-GTT----T--C--C-C
193 CCCTTGGTTGAGATAGCTTCTC
* * * *
32894 TCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTTCCCTTGAAACAGAAA-ATTTTTTCTCGCT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACA-AAATATTTTATCTCACT
* * * * ** * ** **
32958 TGAGATAGTTTCGCTTGAAATTGAAGATTTTTTCTCGCTTGAGA-AGTTTTCCCTCAAAATTGAA
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TTTCCCTTGAAACAGAA
* ** * * * * *
33022 GATATTATTTCGCTTGAGATTG-TTTCCTTCGAAACAGAAGATTTTATCTCGCTTGAGATCGTTT
129 GATTTTACCTCGCTTGAGATAGTTTTTC-TCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTT
* *
33086 CTGTCGAAAATTAAGATTTTATATTGCTTGAGATAG-TTTTCC
193 C---C----CTT--G----------G-TTGAGATAGCTTCT-C
* * * * * * * *
33128 TCGGAATAGAAGATTTTATCTCGCTTAAGATAGTTTACCTCA--AAACAGAAGATTTCATTTCGC
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CC-CATGAAACAAAATATTTTATCTCAC
* * * * * * * * *
33191 TTGATATAGTTTCTCTCAAAATAGAAGATTTTATATCGCTTGAGATAGTTTCCCTCGAAACAGGA
64 TTCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAA
* ** ** *
33256 GATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAAAAGATTTTGAT-TCGCTTGGGATAGTTT
129 GATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTT-ATCTCGCTTGAGATAGTTT
33320 CCCTCGAATCAGAAGATTTTATATCGCTTGAGATA-CTTTCTC
193 CCCT----T-----G----------G-TTGAGATAGC-TTCTC
* *** * *
33362 TCGAAATAGAAGATTTTATCTCGCTTGAGATAGTTTCAGTTGAAACAGAAGATTTTATCTCACTT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACAAAATATTTTATCTCACTT
* * * * * * * *
33427 GAGATAGATTCCCACGAAATATAAGATTTTATCTTGCTTGAGATAGTTTCACTTGAAACAAAATA
66 CAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAGA
* ** * * * *
33492 TTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTTTCTCGTTTGAGATA-------
131 TTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCCC
33550 ---GTT----T--C--C-C
196 TTGGTTGAGATAGCTTCTC
* * * * *** * * **
33557 TCGAAACAGATGATTTTGTCTCGCTTGAGATAGTTTCCCCTTAAATTGAAGATTTTTTCTTGCTT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACAAAATATTTTATCTCACTT
* * * ** * * * * *
33622 GAGAT-GTTTTCCAC-CAAAATTGAAGATCTTATATTGCTTGAGATAGTTTCCCTCGAAACAGAG
66 CAGATAG-ATTCC-CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAA
* * ** ** * *
33685 GATTTTATCTCGCTTGAGATCGTTTCCCTCGAAAA-TTAAGATTTTATATTGCTTGAG--A----
129 GATTTTACCTCGCTTGAGATAGTTTTTCTC-AAAACAAAAGATTTTATCTCGCTTGAGATAGTTT
*
33743 --------T-A-AT--TTTC-C
193 CCCTTGGTTGAGATAGCTTCTC
* * * * * *
33752 TCGGAACAGAAGATTTTATCTCGCTTGAGATAGTATCCC-TCGAAACAGAAGATTTTATATCGCT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
* * * * * *
33816 TGAGATAGTTTCCGTTGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAGG
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
** * * * * * *
33881 ATTTTGTCTCGCTTGGGATAG-TTTCCTTCGAAACAGAAGATTTTTTCTCGCTTGAGATCGTTT-
130 ATTTTACCTCGCTTGAGATAGTTTTTC-TCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTC
* *
33944 --TT-GTCGA-A-A----AT-
194 CCTTGGTTGAGATAGCTTCTC
* * ** * * * * *
33955 T--------ATGATTTTATATTTCTTGAGATAGTTTTCC-TCGAAATAGAAGATTTTATCTCTCT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
* * * * * * * * * * *
34011 TAAGATAGTTTACCTCAAAAGAAAAGATTTTATTTCGCTTGATATAGTTTCTC-TCAGAATAGAA
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGA-AACAGAA
** * ** ** **
34075 GATTTTATATCGCTTGAGATAATTTCGCTTGAAACAGGAGATTTTATCTCGCTT--GATA-----
129 GATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTC
*
34133 ---TAGTT----TA-C--CT-
194 CCTTGGTTGAGATAGCTTCTC
* * * * * * * *
34143 T-GAAACAAAAGATTTTGTCTCGCTTGGGATAGTTTCCC-TCGAATCAGAAGATTTTATATCGCT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
* ** * * *
34206 TGAGATACTTTCCCTCGAAACAGAAGATTTTATTTCGCTTGAGATAGTTTCCGTTAAAACAGAAG
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
* * * * * * * *
34271 ATTTTATCTAGCTAGAGATAG--ATTCCCATGAAATATAAGATTTTATCTTGCTTGAGATAGTTT
130 ATTTTACCTCGCTTGAGATAGTTTTTCTCA--AAACAAAAGATTTTATCTCGCTTGAGATAGTTT
34334 --C-----------A----CT-
193 CCCTTGGTTGAGATAGCTTCTC
* * ** * **
34338 T-GAAACAAAATATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAAAATATTTTTTCTCGTTT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACAAAATATTTTATCTCACTT
* * * * * * ** *
34402 GAGATAGTTTCCCTCGAAACAGATGATTTTGTCTCGCTTGAGATAATTTTCCTTGAAATTGATGA
66 CAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAGA
** * * ** **
34467 TTTTTTCTTGCTTGAGAT-G-TTTTC-C---ACTAAA-ATTGAAGAT--CTT---ATA---T--C
131 TTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCCC
*
34515 --GGTTGAGATAGTTTCTC
196 TTGGTTGAGATAGCTTCTC
* * * * * **
34532 TCGAAACAGAGGATTTTATCTCGCTTGAGATCGTTTCCC-TCGAAA-ATTAAGATTTTATATTGC
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACA-AAATATTTTATCTCAC
* * * * *
34595 TTAAGATA-ATTTTCCTCGGAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAATAGA
64 TTCAGATAGA-TTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGA
* ** * * * * *
34659 AGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAATATTTTGTCTCGCTTGGGATA----
128 AGATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTT
34720 ------GTT----T--C--C-C
193 CCCTTGGTTGAGATAGCTTCTC
* * * * * *
34727 TCGAAACAGAAGATTTTGTCTCGCTTGGGATAGTTTCCCTTGAAATAGAAGAT-TTTTGTCTCGC
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACA-AA-ATATTTTATCTCAC
** * ** * * * * * * * *
34791 TTGGGATAGTTTCGGTCAAAATAGAATATTTTGTCTTGCTTTAGATAGTTTCCCTCGTAACAGAA
64 TTCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAA
* * * * * * *
34856 GAATTTATCTCCCTTGAGATAGTTTCAT-TCGAAACAGAAGATTTTATCTCACTTGAGATAGTTT
129 GATTTTACCTCGCTTGAGATAGTTT-TTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTT
34920 CCC-----------A-------
193 CCCTTGGTTGAGATAGCTTCTC
* * * * * *
34924 T-GAAACAGAATATTTTATCTCGCTTGAGATATTTTCTC-TCGAAACAGAAGATTTTATCTCGCT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
* ** * * * * *
34987 TGAGATATTTTCCCTTGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCCTTGAAAGAAAAC
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
* * ** ****** * * ****
35052 ATTTTATCTTAG-TTGAGATAGTTTCCCTTGGTTGAGATAG-TTTT-CCTCGAAACAGA-AGTTT
130 ATTTTA-CCTCGCTTGAGATAGTTTTTCTCAAAACA-AAAGATTTTATCTCGCTTGAGATAGTTT
*** * * *
35113 TTATGTCGCTTGAGATAGTTTTTC
193 CCCT-T-GGTTGAGATAGCTTCTC
* * * * * * * * * *
35137 TCGAAACATAAAAAATTT-TCTCGCTTCATATAGATTT--CGTCAAAGAAGAAGA-TTTATTCCC
1 TCGAAACA-GAAGATTTTATCTCGCTTGAGATAG-TTTCCCATGAAACAA-AATATTTTA-TCTC
* * * * * *
35198 GCTTGAGATAG-TTTCCTTGAAACAGAAGATTTTGTCTCGCTTGAGATAGTTTCCCTTGAAATAG
62 ACTTCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAG
* * * * ** * *
35262 AAGATTATGCCTCTCTTAAGATAGTTTCCCTCGAAACAGAAA-ATTTTGTCTCGCTTGAGATA--
127 AAGATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACA-AAAGATTTTATCTCGCTTGAGATAGT
35324 --------GTT----T--C--C-C
191 TTCCCTTGGTTGAGATAGCTTCTC
* * * * *
35331 TCGAAACAGAAGATTTTTTCTCGCTTGAGATTGTTTCCC-TCGAAACAGAATATTTTTTCTCGCT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
* * * * * * * *
35395 TGAGATAGTTTCCTTAGAAACAGAAGATTTTATCTCGCTTGAGATAGTCTCCCTCGAAATAAAAG
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
** * ** * * * *
35460 ATTTTTTCTCACTTGAGATAGTTTCCCTCAAAATAGAAGATCTTATATCGCTTGAGATA------
130 ATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
35519 ----GTT----T--C--C-C
195 CTTGGTTGAGATAGCTTCTC
* * * *
35526 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTACGAAACAAAAGATTTTATCTCGCTT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACAAAATATTTTATCTCACTT
* * * * * *
35591 GAAATAGTTTCCCTCGAAATAGAAGATTTTATTTCGCTTGAGATAGTTTCCCTCGAAACAGAAGA
66 CAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAGA
** * ** * * *
35656 TTTTGTCTCGCTTGAGATAATTTCCCTCGAAATAGAAGATTTTATCTCGCTTGAGATAGTTTCCC
131 TTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTT--C
* ** *
35721 TCGAAACAGAAGATTTTTTCTCGTTTGAGATATTTTCCC
194 -C----C-----------T-T-GGTTGAGATAGCTTCTC
* * * * * *
35760 TCGAAACAGAAGATTTTTTCTCGCTTGAAATGGTTTCCCTTGAAATATAATATTTTA-CATCACT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACAAAATATTTTATC-TCACT
* * ** * * * * ** ** *
35824 TGAGATAGTTTCTATCGAGATAGAAGATTTTTTGTCGCTTGAGATAGTTTTTCTCCAAACAGAAC
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
** ** * * *
35889 ATTTTGTCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTGTCTCGCTTGAG--A------
130 ATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
*
35946 ------T-A-AT--TTTCT-
195 CTTGGTTGAGATAGCTTCTC
* * * * * * * *
35955 TCGAAACAGAACATTTTATCTCGCTTGAGATTGTTTCTC-TCGATACAGAAGATTTTATCTCGCG
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
* * * * * * *
36019 TGAGATAG-TTTCCTACGATATAGAAGATTCTATCTCGCTTGAGATGGTTTCCCTTGAAA-ATAA
65 TCAGATAGATTCCCT-CGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAA
* * * * ** * * * *
36082 TATTTTATCTCACTTGAGATGGTTTCCCTCGAAACAGAAGATCTTGTCTCGCTTGAGAGAGTTTG
129 GATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTT--GAGA---T-
* *** * *
36147 AGATTTTCTCTCACTTGAGATAGTTTCCC
188 AG--TTTCCCTTGGTTGAGATAGCTTCTC
* * * * * * *
36176 TCGAAACATAAGATTTTTTCTCGTTTGAGATAGTTT-CCTTCGAAACAGAAGATTTTATCTCGCT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
* * * * * * * *
36240 TGAGATAGTTTCCCT-TAAATAGAATATTTTAACTCGCTTGAGATAGTTTCCCTTAAAATAGAAG
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
*** ** * * *
36304 ATTTTGTTTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTTAGAT-GATTTC
130 ATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAG-TTTC
36368 CC----TTGA-A-A-------
194 CCTTGGTTGAGATAGCTTCTC
* * ** * * ** *
36376 -C---A-A-AATATTTTATCTCGCTTGAGATGGTTTCCCTCGAAACAGAAGATTTTGCCTCGCTT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACAAAATATTTTATCTCACTT
* * * * * * * * *
36435 AATATTGTTTCCCTCCAAATAGAAGATTTTGTCTCGCTTGAGATAGTTTCCCTCGAAACAGTAGA
66 CAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAGA
* * * * * *
36500 TTTTGCCTCGCTTGAGATAG-TTTCCGTCGAAACAGAACATTTTTTCTCGCTTGAG--A------
131 TTTTACCTCGCTTGAGATAGTTTTTC-TCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
36556 -TT-GTT----T--C--C-C
195 CTTGGTTGAGATAGCTTCTC
* * * * * *
36565 TCTAAACAGAAGTTTTTATTTCGCTTGAGATAGTTTCCC-TCGAAATAGAATATTTTATCTCGCT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
* * * * * *
36629 TCAGATTGTTTCCCTCGAAAGAGAATATTTTATCTCGCTTGAGATAGTTTTCCTCGAAACAGAAG
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
** ** * * *
36694 ATTTTGTCTCGCTTGAGATAGTTTCCCTCCAAACAGAAGATTTTGTCTCGCTTGAGATA------
130 ATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
36753 ----GTT----T--C--C-C
195 CTTGGTTGAGATAGCTTCTC
* * *
36760 TCGAAACAGAAGATTTTATCTTGCTTGAGATAGTTT-CCATCGAAACAAAAGATTTTATCGCACT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
* * * * * ** *
36824 TGAGATCGTTTCCCTCGACACAGAAGATTTTATCTCGCTAGAGATACATTCCCTCGAAACAGAAG
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
* * * ** * * * *
36889 ATTTTAGCTCTCTTAAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGTTTAAGATAGTTTCC
130 ATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
*
36954 C----TCGA-A-A------C
195 CTTGGTTGAGATAGCTTCTC
* * * ** * * *
36962 T------A-AAGATTTAATCTCCCTTGAGATAGTTTCACGCGAAACAGAAGATTTTATCTCGCTT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACAAAATATTTTATCTCACTT
* * * * ***
37020 GAGATAGTTTCCCTCGAAACAGAAGATTTTTTCAT-TCTTGAGATAGTTTCCCACAAAACAGAAG
66 CAGATAGATTCCCTCGAAACAGAAGATTTTATC-TCGCTTGAGATAGTTTCCCTTGAAACAGAAG
** * * **
37084 ATTTTTTCTCGCTTGAGATAGTTTCAT-TCGAAACCGAAGATTTTATCTCGCTTGAGATAGTTTC
130 ATTTTACCTCGCTTGAGATAGTTT-TTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTC
* *
37148 CCTGAAATAGAATCTTTTAACTCACTTGAGATAGTTTCTC
194 CCT----T-G--------------GTTGAGATAGCTTCTC
* * * * * * * *
37188 TCGAAATAGAAGATTTTGTCTCGCTAGAGATAGTTT-CC-TCCAAATAGAATATTTTGTCTCGCT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
* * * * * * *
37251 TGAGATAGTTTCCCTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGTTTCCGTAGAAACAGAAC
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
* * * * ** * * * *
37316 AATTTATCTCGCTTGAAATTGTTTCCCTCGAAACAGAATATTTTATCTCTCTTGAGATA------
130 ATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
37375 ----GTT----T--C--C-C
195 CTTGGTTGAGATAGCTTCTC
* * * * * * *
37382 TCGAAAAAGAAGATTTTATCTCGCTTGAGGTAGTTTCCCTTGAAATAAAAGATTTTATATCGCTT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACAAAATATTTTATCTCACTT
* * * * * * * * *
37447 GAGATAGTTTCCCACGAAATAGAAGATTCTATCAT-GCTTTAGATGGTTTCCCTTGAAA-TGAAT
66 CAGATAGATTCCCTCGAAACAGAAGATTTTATC-TCGCTTGAGATAGTTTCCCTTGAAACAGAAG
* * ** * * *
37510 ATTTTATCTCGCTTGAGATGGTTTCCCTCGAAACAGAAGATTTTGTCTCGCTTGAGATAGTTTGA
130 ATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAG--A---T-A
** * * *
37575 GATTATGTCTTGCTTGAGATAGTTTCCC
189 G-TT-TCCCTTGGTTGAGATAGCTTCTC
* * * * * * *
37603 TCGAAACAAAAGATTTTTTCTCGCTTAAGATAGTTT-CCTTCGAAACAGAAGATTTTATCTCGCT
1 TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCACT
* * * * * * * * **
37667 TGAGATAGTTTCCCT-GAAATAGAATATTTTAACTCGCTTAAGATAGTTTCTCTCGAAGTAGAAG
65 TCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAG
* ** * * * *
37731 ATTTTGCCTCGCTTGAGATAGTTTCCCTCCAAATAGAAGATTTTGTCTCGCTTGAGATA------
130 ATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
37790 ----GTT----T--C--C-C
195 CTTGGTTGAGATAGCTTCTC
** * * * *
37797 TCGAAACA-ATAGATTTTGCCTCGCTTGAGATAGTTT-CCGTCGAAACAGAACATTTTTTCTCAC
1 TCGAAACAGA-AGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAAAATATTTTATCTCAC
* * * * * * *
37860 TTGAGATTGTTTCCCTCGAAACAGAAGTTTTTATTTCGCTTGAGATAGTTTCCCTCGAAATAGAA
64 TTCAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAA
* * * * * * *
37925 GATTTTATCTCGCTTGAGATAGTTTTCCTCGAAAGAGAATATTTTATATCGCTTGAGATAGTTTC
129 GATTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTC
37990 TCTCGAAACA
Statistics
Matches: 8570, Mismatches: 1518, Indels: 1624
0.73 0.13 0.14
Matches are distributed among these distances:
178 1 0.00
179 1 0.00
180 2 0.00
183 4 0.00
185 4 0.00
186 7 0.00
187 7 0.00
188 14 0.00
189 564 0.07
190 36 0.00
191 12 0.00
192 14 0.00
193 169 0.02
194 685 0.08
195 4092 0.48
196 373 0.04
197 22 0.00
198 12 0.00
199 24 0.00
200 17 0.00
201 15 0.00
202 13 0.00
203 15 0.00
204 18 0.00
205 6 0.00
206 8 0.00
207 8 0.00
208 4 0.00
209 6 0.00
210 10 0.00
211 4 0.00
212 134 0.02
213 117 0.01
214 648 0.08
215 41 0.00
216 12 0.00
217 2 0.00
218 11 0.00
219 12 0.00
220 82 0.01
221 246 0.03
222 115 0.01
223 5 0.00
224 90 0.01
225 4 0.00
226 3 0.00
227 1 0.00
228 85 0.01
229 11 0.00
230 61 0.01
231 3 0.00
232 126 0.01
233 33 0.00
234 547 0.06
235 13 0.00
236 1 0.00
ACGTcount: A:0.29, C:0.17, G:0.16, T:0.37
Consensus pattern (214 bp):
TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCATGAAACAAAATATTTTATCTCACTT
CAGATAGATTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTTGAAACAGAAGA
TTTTACCTCGCTTGAGATAGTTTTTCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCCC
TTGGTTGAGATAGCTTCTC
Found at i:28182 original size:95 final size:94
Alignment explanation
Indices: 28012--28192 Score: 222
Period size: 95 Copynumber: 1.9 Consensus size: 94
28002 TTATCTCGCT
* * *
28012 TGAGATATTTTCTCTTGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCTTTGAAACAAAAT
1 TGAGATATTTTCTC-TGAAACAAAAGATTTTACCTCGCTTGAGATAGTTTCCATCGAAACAAAAT
* *
28077 ATTCTATCTCGGTTGAGATAGTTTCTCTGG
65 ATTCTATCTCGCTTCAGATAGTTTCTCTGG
** *
28107 TGAGATAGCTTTTCTC-GAAACAAAAGATTTTATTTCGCTTGAGATAGTTTTCATCGAAACAGAA
1 TGAGATA--TTTTCTCTGAAACAAAAGATTTTACCTCGCTTGAGATAGTTTCCATCGAAACA-AA
* *
28171 AT-TTTTTTCTCGCTTCAGATAG
63 ATATTCTATCTCGCTTCAGATAG
28193 ATTCCCTCGA
Statistics
Matches: 73, Mismatches: 10, Indels: 6
0.82 0.11 0.07
Matches are distributed among these distances:
95 62 0.85
96 4 0.05
97 7 0.10
ACGTcount: A:0.29, C:0.15, G:0.17, T:0.39
Consensus pattern (94 bp):
TGAGATATTTTCTCTGAAACAAAAGATTTTACCTCGCTTGAGATAGTTTCCATCGAAACAAAATA
TTCTATCTCGCTTCAGATAGTTTCTCTGG
Found at i:28232 original size:134 final size:133
Alignment explanation
Indices: 27985--28235 Score: 317
Period size: 134 Copynumber: 1.9 Consensus size: 133
27975 AGATATTTTC
*
27985 TCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCTCTTGAAACAGAAGATTTTACCTCGC
1 TCTCGAAACAAAAGATTTTATCTCGCTTGAGATATTTTCTC-TGAAACAGAAGATTTTACCTCGC
* * * * * *
28050 TTGAGATAGTTTCCTTTGAAACAAAATATTCTATCTCGGTTGAGATAGTTTCTCTGGTGAGATAG
65 TTCAGATAGATTCCCTCGAAACAAAAGATTCTATCTCGCTTGAGATAGTTTCTCTGGTGAGATAG
28115 CTTT
130 CTTT
* **
28119 TCTCGAAACAAAAGATTTTATTTCGCTTGAGATAGTTTTCATC-GAAACAGAA-ATTTTTTTCTC
1 TCTCGAAACAAAAGATTTTATCTCGCTTGAGATA-TTTTC-TCTGAAACAGAAGA-TTTTACCTC
* * * * *
28182 GCTTCAGATAGATTCCCTCGAAACAGAAGATTTTTTCTTGCTTGATATAGTTTC
63 GCTTCAGATAGATTCCCTCGAAACAAAAGATTCTATCTCGCTTGAGATAGTTTC
28236 CCTTGAAACA
Statistics
Matches: 99, Mismatches: 15, Indels: 6
0.82 0.12 0.05
Matches are distributed among these distances:
133 1 0.01
134 91 0.92
135 5 0.05
136 2 0.02
ACGTcount: A:0.28, C:0.17, G:0.16, T:0.39
Consensus pattern (133 bp):
TCTCGAAACAAAAGATTTTATCTCGCTTGAGATATTTTCTCTGAAACAGAAGATTTTACCTCGCT
TCAGATAGATTCCCTCGAAACAAAAGATTCTATCTCGCTTGAGATAGTTTCTCTGGTGAGATAGC
TTT
Found at i:28268 original size:173 final size:173
Alignment explanation
Indices: 27950--28273 Score: 413
Period size: 173 Copynumber: 1.9 Consensus size: 173
27940 AGTTTCCCAT
* * * *
27950 GAAACAGAATATTTTATCTTGCTTGAGATATTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGA
1 GAAACAAAAGATTTTATCTTGCTTGAGATATTTTCTATCGAAACAGAAGATTTTATCTCGCTTCA
** * * *
28015 GATATTTTCTCTTGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCTTTGAAACAAAATATT
66 GATAGATTCCCTCGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCCTTGAAACAAAATATT
*
28080 CTATCTCGGTTGAGATAGTTTCTCTGGTGAGATAGCTTTTCTC
131 CTATCTCAGTTGAGATAGTTTCTCTGGTGAGATAGCTTTTCTC
*
28123 GAAACAAAAGATTTTAT-TTCGCTTGAGATAGTTTTC-ATCGAAACAGAA-ATTTTTTTCTCGCT
1 GAAACAAAAGATTTTATCTT-GCTTGAGATA-TTTTCTATCGAAACAGAAGA-TTTTATCTCGCT
** * * *
28185 TCAGATAGATTCCCTCGAAACAGAAGATTTTTTCTTGCTTGATATAGTTTCCCTTGAAAC-ATAT
63 TCAGATAGATTCCCTCGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCCTTGAAACAAAAT
* * *
28249 GATTTTGTCTCATTTGAGATAGTTT
128 -ATTCTATCTCAGTTGAGATAGTTT
28274 TTCTCAAAAC
Statistics
Matches: 128, Mismatches: 19, Indels: 8
0.83 0.12 0.05
Matches are distributed among these distances:
172 6 0.05
173 117 0.91
174 5 0.04
ACGTcount: A:0.28, C:0.16, G:0.16, T:0.40
Consensus pattern (173 bp):
GAAACAAAAGATTTTATCTTGCTTGAGATATTTTCTATCGAAACAGAAGATTTTATCTCGCTTCA
GATAGATTCCCTCGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCCTTGAAACAAAATATT
CTATCTCAGTTGAGATAGTTTCTCTGGTGAGATAGCTTTTCTC
Found at i:29319 original size:67 final size:65
Alignment explanation
Indices: 29217--29347 Score: 181
Period size: 67 Copynumber: 2.0 Consensus size: 65
29207 ACGAAACAGA
* * * * *
29217 AGATTTTATCTCGCTTGAGATGGTTTCCTCGAAACAGAAGATTTTGTTTCGCTTGAGATAGTTTG
1 AGATTTTATCTCACTTGAGATAGTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTG
* *
29282 AGATTTTTTGCTCACTTGAGATAGTTCCCTTCGAAACAGAAGATTTTATCTCGTTTGAGATAGTT
1 AGATTTTAT-CTCACTTGAGATAGTTCCC-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTT
29347 T
64 T
29348 TTCTTGAAAC
Statistics
Matches: 57, Mismatches: 7, Indels: 2
0.86 0.11 0.03
Matches are distributed among these distances:
65 8 0.14
66 16 0.28
67 33 0.58
ACGTcount: A:0.24, C:0.15, G:0.21, T:0.40
Consensus pattern (65 bp):
AGATTTTATCTCACTTGAGATAGTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTG
Found at i:30226 original size:21 final size:20
Alignment explanation
Indices: 30180--30226 Score: 60
Period size: 19 Copynumber: 2.4 Consensus size: 20
30170 AAATAGATGA
*
30180 TTTTATCTCGGTTGAGATAG
1 TTTTCTCTCGGTTGAGATAG
*
30200 -TTTCTCTTGGTTGAGATAG
1 TTTTCTCTCGGTTGAGATAG
30219 CTTTTCTC
1 -TTTTCTC
30227 GAAACAAAAG
Statistics
Matches: 23, Mismatches: 2, Indels: 3
0.82 0.07 0.11
Matches are distributed among these distances:
19 17 0.74
21 6 0.26
ACGTcount: A:0.15, C:0.15, G:0.21, T:0.49
Consensus pattern (20 bp):
TTTTCTCTCGGTTGAGATAG
Found at i:30253 original size:39 final size:39
Alignment explanation
Indices: 30210--31230 Score: 1198
Period size: 39 Copynumber: 26.3 Consensus size: 39
30200 TTTCTCTTGG
* * *
30210 TTGAGATAGCTTT-TCTCGAAACAAAAGATTTTATTTCGC
1 TTGAGATAG-TTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
30249 TTGAGATAGTTTTCATCGAAACAGAA-ATTTTTTTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGA-TTTTATCTCGC
* * * *
30288 TTCAGATAGATTCCCTCGAAACAGAAGATTTTTTCTTGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * * * **
30327 TTGATATAGTTTCCCTTGAAACATATGATTTTGTCTCAT
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
** * *
30366 TTGAGATAGTTTTTCTCAAAACAGAAGATTTTATCTCCC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
*
30405 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
30444 TTGAGATTA-TTTCCCTCGAAATAGAAGATTTTTTCTCGC
1 TTGAGA-TAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
*
30483 TTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
30522 TT--G--A--TTCCCTCGAAATATAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
*
30555 TTAAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
30594 TTGATATAGTTTCTCTCGAAACAGAAGATTTTATATCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
30633 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
30672 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTGTCTTGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
30711 TTGGGATAGTTTCCCTCGAAATAGAATATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
30750 TTGAGATAGGTTCCCTCGAAACAGAAGAATTTATCTCAC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
30789 TTCAGATATTTTACCTCGAAACAGAAGATTTTTTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
30828 TTGAGATAGTTTCCTTCGAAATATAACATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
** * *
30867 TTGAGATAGTTTCCCTTAAAACAGAATATTTTATCTCAC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * * *
30906 TTGAGAAAATTTCTCTCGAAATAGAAGATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * * *
30945 TTGAGATAGTTTCCCTCAAAATATAAGATTTTGTCTTGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
30984 TTGAGATAGTTTCCCTCGTAACAGAAGATTTTATCTCCC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* **
31023 TTGAGATTGTTTCAATCGAAACAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
31062 TTGAGATAGTTTCCCAT-GAAACAGAATATTTTATCTTGC
1 TTGAGATAGTTTCCC-TCGAAACAGAAGATTTTATCTCGC
* *
31101 TTGAGATATTTTCTCTCGAAACAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * * *
31140 TTGAGATATTTTCTCTTGAAACAGAAGATTTTACCTCGT
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * * * *
31179 TTGAGATAGTTTCCTTTGAAACAAAATATTCTATCTCGG
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
31218 TTGAGATAGTTTC
1 TTGAGATAGTTTC
31231 TCTTGGTTGA
Statistics
Matches: 835, Mismatches: 134, Indels: 26
0.84 0.13 0.03
Matches are distributed among these distances:
33 28 0.03
35 2 0.00
37 2 0.00
38 7 0.01
39 792 0.95
40 4 0.00
ACGTcount: A:0.29, C:0.18, G:0.16, T:0.38
Consensus pattern (39 bp):
TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
Found at i:30286 original size:97 final size:97
Alignment explanation
Indices: 30113--30296 Score: 237
Period size: 97 Copynumber: 1.9 Consensus size: 97
30103 TTTATCTCGC
* * *
30113 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATATCGCTTGAGATAGTTTCCCTCAAAATAGAT
1 TTGAGATAGTTTCCCTCGAAACAAAAGATTTTATATCGCTTGAGATAGTTTCCATCAAAACAGAT
* * *
30178 GATTTTATCTCGGTTGAGATAGTTTCTCTTGG
66 AATTTTATCTCGCTTCAGATAGTTTCTCTTGG
* * * *
30210 TTGAGATAGCTTT-TCTCGAAACAAAAGATTTTATTTCGCTTGAGATAGTTTTCATCGAAACAGA
1 TTGAGATAG-TTTCCCTCGAAACAAAAGATTTTATATCGCTTGAGATAGTTTCCATCAAAACAGA
*
30274 -AATTTTTTTCTCGCTTCAGATAG
65 TAA-TTTTATCTCGCTTCAGATAG
30297 ATTCCCTCGA
Statistics
Matches: 74, Mismatches: 11, Indels: 4
0.83 0.12 0.04
Matches are distributed among these distances:
96 1 0.01
97 70 0.95
98 3 0.04
ACGTcount: A:0.28, C:0.15, G:0.18, T:0.39
Consensus pattern (97 bp):
TTGAGATAGTTTCCCTCGAAACAAAAGATTTTATATCGCTTGAGATAGTTTCCATCAAAACAGAT
AATTTTATCTCGCTTCAGATAGTTTCTCTTGG
Found at i:30318 original size:136 final size:136
Alignment explanation
Indices: 30074--30344 Score: 348
Period size: 136 Copynumber: 2.0 Consensus size: 136
30064 TTTATCTCGC
* *
30074 TTGAGATAGTTTCCCTCAAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAA
1 TTGAGATAGTTTCCCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCCATCGAAACAGAA
* * * * *
30139 GATTTTATATCGCTTGAGATAGTTTCCCTCAAAATAGATGATTTTATCTCGGTTGAGATAGTTTC
66 GATTTTATATCGCTTCAGATAGATTCCCTCAAAACAGAAGATTTTATCTCGCTTGAGATAGTTTC
*
30204 TCTTGG
131 CCTTGG
* * * *
30210 TTGAGATAGCTTT-TCTCGAAACAAAAGATTTTATTTCGCTTGAGATAGTTTTCATCGAAACAGA
1 TTGAGATAG-TTTCCCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCCATCGAAACAGA
* * * * * *
30274 A-ATTTTTTTCTCGCTTCAGATAGATTCCCTCGAAACAGAAGATTTTTTCTTGCTTGATATAGTT
65 AGA-TTTTATATCGCTTCAGATAGATTCCCTCAAAACAGAAGATTTTATCTCGCTTGAGATAGTT
30338 TCCCTTG
129 TCCCTTG
30345 AAACATATGA
Statistics
Matches: 115, Mismatches: 18, Indels: 4
0.84 0.13 0.03
Matches are distributed among these distances:
135 1 0.01
136 111 0.97
137 3 0.03
ACGTcount: A:0.28, C:0.17, G:0.17, T:0.38
Consensus pattern (136 bp):
TTGAGATAGTTTCCCTCAAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCCATCGAAACAGAA
GATTTTATATCGCTTCAGATAGATTCCCTCAAAACAGAAGATTTTATCTCGCTTGAGATAGTTTC
CCTTGG
Found at i:30338 original size:175 final size:175
Alignment explanation
Indices: 30035--30377 Score: 465
Period size: 175 Copynumber: 2.0 Consensus size: 175
30025 TTTATATTGC
* * * *
30035 TTGAGATAGTTTTCCTCGGAATAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCAAAACAGAA
1 TTGAGATAGTTTTCCTCGAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCCATCAAAACAGAA
* *
30100 GATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATATCGCTTGAGATAGTTTC
66 GATTTTATCTCGCTTCAGATAGATTCCCTCGAAACAGAAGATTTTATATCGCTTGAGATAGTTTC
* *
30165 CCTCAAAATAGATGATTTTATCTCGGTTGAGATAGTTTCTCTTGG
131 CCTCAAAACAGATGATTTTATCTCAGTTGAGATAGTTTCTCTTGG
* * *
30210 TTGAGATAGCTTTT-CTCGAAACAAAAGATTTTATTTCGCTTGAGATAGTTTTCATCGAAACAGA
1 TTGAGATAG-TTTTCCTCGAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCCATCAAAACAGA
* * * * *
30274 A-ATTTTTTTCTCGCTTCAGATAGATTCCCTCGAAACAGAAGATTTTTTCTTGCTTGATATAGTT
65 AGA-TTTTATCTCGCTTCAGATAGATTCCCTCGAAACAGAAGATTTTATATCGCTTGAGATAGTT
** * * *
30338 TCCCTTGAAACATATGATTTTGTCTCATTTGAGATAGTTT
129 TCCCTCAAAACAGATGATTTTATCTCAGTTGAGATAGTTT
30378 TTCTCAAAAC
Statistics
Matches: 145, Mismatches: 21, Indels: 4
0.85 0.12 0.02
Matches are distributed among these distances:
174 1 0.01
175 140 0.97
176 4 0.03
ACGTcount: A:0.28, C:0.16, G:0.17, T:0.39
Consensus pattern (175 bp):
TTGAGATAGTTTTCCTCGAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCCATCAAAACAGAA
GATTTTATCTCGCTTCAGATAGATTCCCTCGAAACAGAAGATTTTATATCGCTTGAGATAGTTTC
CCTCAAAACAGATGATTTTATCTCAGTTGAGATAGTTTCTCTTGG
Found at i:31231 original size:21 final size:19
Alignment explanation
Indices: 31212--31254 Score: 61
Period size: 19 Copynumber: 2.3 Consensus size: 19
31202 AAATATTCTA
31212 TCTCGGTTGAGATAGTTTC
1 TCTCGGTTGAGATAGTTTC
*
31231 TCTTGGTTGAGATAGCTTT-
1 TCTCGGTTGAGATAG-TTTC
31250 TCTCG
1 TCTCG
31255 AAACAGAAGA
Statistics
Matches: 21, Mismatches: 2, Indels: 2
0.84 0.08 0.08
Matches are distributed among these distances:
19 18 0.86
20 3 0.14
ACGTcount: A:0.14, C:0.16, G:0.26, T:0.44
Consensus pattern (19 bp):
TCTCGGTTGAGATAGTTTC
Found at i:31231 original size:117 final size:117
Alignment explanation
Indices: 30224--38731 Score: 3452
Period size: 117 Copynumber: 72.7 Consensus size: 117
30214 GATAGCTTTT
* * * * *
30224 CTCGAAACAAAAGATTTTATTTCGCTTGAGATAGTTTTCATCGAAACAGAA-ATTTTTTTCTCGC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGA-TTTTATCTCGC
* * * * * *
30288 TTCAGATAGATTCCCTCGAAACAGAAGATTTTTTCTTGCTTGATATAGTTTCC
65 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * ** * * *
30341 CTTGAAACATATGATTTTGTCTCATTTGAGATAGTTT-TTCTCAAAACAGAAGATTTTATCTCCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCT-TCGAAACAGAAGATTTTATCTCGC
*
30405 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTGTCTCGCTTGAGAT-TATTTCC
65 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAT-TTTCC
* *
30458 CTCGAAATAGAAGATTTTTTCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* * * *
30523 T--G--A--TTCCCTCGAAATATAAGATTTTATCTCGCTTAAGATAGTTTCC
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* *
30569 CTCGAAACAGAAGATTTTATCTCGCTTGATATAGTTT-CTCTCGAAACAGAAGATTTTATATCGC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCT-TCGAAACAGAAGATTTTATCTCGC
*
30633 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
65 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * * * *
30686 CTCGAAACAGAAGATTTTGTCTTGCTTGGGATAGTTTCCCTCGAAATAGAATATTTTGTCTCGCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* * * * *
30751 TGAGATAGGTTCCCTCGAAACAGAAGAATTTATCTCACTTCAGATATTTTAC
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * *
30803 CTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTTCCTTCGAAATATAACATTTTATCTCGCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
** * * * * *
30868 TGAGATAGTTTCCCTTAAAACAGAATATTTTATCTCACTTGAGAAAATTTCT
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * * * * *
30920 CTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGTTTCCCTCAAAATATAAGATTTTGTCTTGCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* * *
30985 TGAGATAGTTTCCCTCGTAACAGAAGATTTTATCTCCCTTGAGAT-TGTTTCA
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAT-TTTCC
* * * *
31037 ATCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAGAATATTTTATCTTGC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CCTTCGAAACAGAAGATTTTATCTCGC
* * *
31101 TTGAGATATTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCT
65 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * * * * *
31154 CTTGAAACAGAAGATTTTACCTCGTTTGAGATAGTTTCCTTTGAAACAAAATATTCTATCTCGGT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* * **** * **** * **
31219 TGAGATAGTTTCTCTTGGTTGAGATAG-CTTT-TCTCGAAACAGAAGATTTTAT
66 TGAGATAGTTTCCCTCGAAACAGA-AGATTTTATCTCGCTTGAG-ATATTTTCC
* **** **** * * ** *** **
31271 TTCGCTTGAGATAG--TTT-TCATCGAAACAGAAATTTTTTTCTCGCTTCAGATAGA--TTCCCT
1 CTCGAAACAGA-AGATTTTATC-TCGCTTGAGATAGTTTCCT-TCGAAACAGA-AGATTTTATCT
**** ** * * * * ** * **** * **
31331 CGAAACAGA-AGATTTTTTCTTG---CTTGATATAGTTTCCCTTGAAACATATGATTTTGT
62 CGCTTGAGATAG--TTTCCCTCGAAAC-AGA-AGATTTTATCTCGCTTGAGAT-ATTTTCC
*** ***** ** * *
31388 CTC-ATTTGAGATAG-TTTT-TCTCAAAACAGA-AGATTT--TATC-TCACTTG-AGATAGTTTC
1 CTCGA-AACAGA-AGATTTTATCTCGCTTGAGATAG-TTTCCT-TCGAAAC-AGAAGAT--TTTA
* **** ** **** ** ** ** * *
31445 CCTCGAAACAGA-AGATTTTGTCTCGCTTGAGATTA-TTTCCCTCAAAATAGAAGAT-TTTT-T
59 TCTCGCTTGAGATAG--TTTCCCTCGAAACAGAAGATTTTATCTC--GCTTG-AGATATTTTCC
**** * * ** * * * * * * * *
31505 CTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCACTTGATTCCCTCGAAATATAAG
1 CTCGAAACAGA-AGATT--TT---ATC--TCG-CTTGA---GA-TAGTTTCCTTCGAAACAGAAG
* *
31570 ATTTTATCTCGCTTAAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTT--GATA--TTCT
53 ATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* *
31631 CTCGAAACAGAAGATTTTATATCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* * * * *
31696 TGAGATAGTTTCCCTCGAAACAGAAGATTTTGTCTTGCATGGGATAGTTTCC
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
** * * * * * *
31748 CTCGAAGTAGAATATTTTGTCTCGCTTGAGATAGGTTCCCTCGAAACAGAAGAATTTATCTCACT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* * * * *
31813 TAAGATATTTTACCTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTTCC
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * * * *
31865 TTCGAAATATAACATTTTATCTCGCTTGAGATAGTTTCCCTT-AAAACAGAATATTTTATCTCAC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CCTTCGAAACAGAAGATTTTATCTCGC
* * * * * *
31929 TTGAGAAAATTTCTCTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGTTTCC
65 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * * * * *
31982 CTCAAAATATAAGATTTTGTCTTGCTTGAGATAGTTTCCCTCGTAACAGAAGATTTTATCTCCCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* ** * * *
32047 TGAGATTGTTTCAATCGAAACAGAAGATTTCATATCGCTTGAGATAGTTTCC
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * *
32099 CAT-GAAACAGAATATTTTATCTTGCTTGAGATA-TTTTCTCTCGAAACAGAAGATTTTATCTCG
1 C-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCT-TCGAAACAGAAGATTTTATCTCG
* * * * *
32162 CTTGAGATATTTTCTCTTGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCC
64 CTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * * **** * * *
32216 TTTGAAACAAAATATTTTATCTCGGTTGAGATAGTTTCTCTT-GGTTGAGATAGCTTTTCTC-CA
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTC-CTTCGAAACAGA-AGATTTTATCTCG
** *** **** *** * * **
32279 AAT-AGA-AGATTTTATTTCGCTTGAGATAG-TTTTCATCGAAACAT-AAAT-TTTTTT
64 CTTGAGATAG--TTTCCCTCGAAACAGA-AGATTTT-ATC-TCGCTTGAGATATTTTCC
*** ** **** * *** * * *
32333 CTCGCTTCAGATAGA--TTCCCTCGAAACAGA-AGATTT-TTTC-TTGCTTG-ATATAGTT-TC-
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG-TTTCCTTCGAAAC-AGAAGAT-TTTATCT
* ** **** ***** * **
32390 C-CTTGAAACATATGATTTTGTCTCGTTTGAGATAG-TTTT-TCTCAAAACAGAAGATTTTAT
62 CGCTTG--AGATA-G--TTTCCCTCGAAACAGA-AGATTTTATCTCGCTTGAG-ATATTTTCC
* ** ** **** * ** **** ** **
32450 CTCGCATGAGATAG--TTTCCCTCGAAACA-AAAGATTTTGTCTCGCTTGAGATTA-TTTCCCTC
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG-TTTCCT-TCGAAACAGAAGATTTTATCTC
***** ** **** * ** * *
32511 AAAACAGA-AGATTTTTTCTCGCTTGATATAG-TTTCCT-TCGAAATAGAAGATTTTATCTCGCT
63 GCTTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTATCTCG--CTTG-AGA---TA------T
32573 TGATTCC
113 T--TTCC
* * * *
32580 CTCGAAATATAAGATTTTTTCTCGCTTGAGATAGTTTCCCAT-GAAACAGAAGATTTTATCTCGC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CCTTCGAAACAGAAGATTTTATCTCGC
** * * ** *
32644 TTGAGATAGTTTCTTTCGAAATAGAAGATTTTATATTTCTTGAGATAGTTTCC
65 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * ** * * * * * *
32697 CTTGAAACATAATTTTTTATCTTGCTTGAGATACTTTCCCTCCAAAAAAGAAGATTTTATCTAGC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CCTTCGAAACAGAAGATTTTATCTCGC
* * ** *
32762 TTGTGATAGTTTCCCTAGAAACAGAAGATTTTATCTCGCTTGAGATAGATACC
65 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * * *
32815 CACGAAATAGAAGATTTTATCTTGCTTGAGATAGTTTCAATT-GAAACAAAATATTTTATCTCGC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTC-CTTCGAAACAGAAGATTTTATCTCGC
* * *
32879 TTGAGATTGTTTCCCTCGAAACAGAAGATTTTTTCTCGCTTGAGATAGTTTCC
65 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * ** *
32932 CTTGAAACAGAAAATTTTTTCTCGCTTGAGATAGTTTCGCTT-GAAATTGAAGATTTTTTCTCGC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTC-CTTCGAAACAGAAGATTTTATCTCGC
* ** * *
32996 TTGAGA-AGTTTTCCCTCAAAATTGAAGATATTATTTCGCTTGAGAT-TGTTTCC
65 TTGAGATAG-TTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAT-TTTCC
* * * * *
33049 TTCGAAACAGAAGATTTTATCTCGCTTGAGATCGTTT-CTGTCGAAA-ATTAAGATTTTATATTG
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCT-TCGAAACA-GAAGATTTTATCTCG
* * * * * *
33112 CTTGAGATAGTTTTCCTCGGAATAGAAGATTTTATCTCGCTTAAGATAGTTTAC
64 CTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * * * *
33166 CTCAAAACAGAAGATTTCATTTCGCTTGATATAGTTT-CTCTCAAAATAGAAGATTTTATATCGC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCT-TCGAAACAGAAGATTTTATCTCGC
* *
33230 TTGAGATAGTTTCCCTCGAAACAGGAGATTTTATCTCGCTTGAGATAGTTTCC
65 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * * *
33283 CTTGAAACAAAAGATTTTGAT-TCGCTTGGGATAGTTTCCCTCGAATCAGAAGATTTTATATCGC
1 CTCGAAACAGAAGATTTT-ATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGC
* * * * *
33347 TTGAGATACTTTCTCTCGAAATAGAAGATTTTATCTCGCTTGAGATAGTTTCA
65 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * ** * * *
33400 GTTGAAACAGAAGATTTTATCTCACTTGAGATAGATTCCCACGAAATATAAGATTTTATCTTGCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* * * * *
33465 TGAGATAGTTTCACTTGAAACAAAATATTTTATCTCGCTTGAGATAGTTTCC
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * *
33517 CTCGAAACAGAAGATTTTTTCTCGTTTGAGATAGTTTCCCTCGAAACAGATGATTTTGTCTCGCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* ** * * *
33582 TGAGATAGTTTCCC-CTTAAATTGAAGATTTTTTCTTGCTTGAGATGTTTTCC
66 TGAGATAGTTTCCCTC-GAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* ** * * * * *
33634 AC-CAAAATTGAAGATCTTATATTGCTTGAGATAGTTTCCCTCGAAACAGAGGATTTTATCTCGC
1 -CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGC
* * * *
33698 TTGAGATCGTTTCCCTCGAAA-ATTAAGATTTTATATTGCTTGAGATAATTTT-C
65 TTGAGATAGTTTCCCTCGAAACA-GAAGATTTTATCTCGCTTGAGAT-ATTTTCC
* * * *
33751 CTCGGAACAGAAGATTTTATCTCGCTTGAGATAGTATCCCTCGAAACAGAAGATTTTATATCGCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* * *
33816 TGAGATAGTTTCCGTTGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * *
33868 CTCGAAACAGAGGATTTTGTCTCGCTTGGGATAGTTTCCTTCGAAACAGAAGATTTTTTCTCGCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* *** * * * **
33933 TGAGATCGTTTTTGTCGAAA-ATTATGATTTTATATTTCTTGAGATAGTTTT-C
66 TGAGATAGTTTCCCTCGAAACA-GAAGATTTTATCTCGCTTGAGATA-TTTTCC
* * * * * * *
33985 CTCGAAATAGAAGATTTTATCTCTCTTAAGATAGTTTACC-TCAAAAGAAAAGATTTTATTTCGC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CCTTCGAAACAGAAGATTTTATCTCGC
* * * * * *
34049 TTGATATAGTTTCTCTC-AGAATAGAAGATTTTATATCGCTTGAGATAATTTCG
65 TTGAGATAGTTTCCCTCGA-AACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * *
34102 CTTGAAACAGGAGATTTTATCTCGCTTGATATAGTTTACCTT-GAAACAAAAGATTTTGTCTCGC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CCTTCGAAACAGAAGATTTTATCTCGC
* * * *
34166 TTGGGATAGTTTCCCTCGAATCAGAAGATTTTATATCGCTTGAGATACTTTCC
65 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * *
34219 CTCGAAACAGAAGATTTTATTTCGCTTGAGATAGTTTCCGTT-AAAACAGAAGATTTTATCTAGC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC-TTCGAAACAGAAGATTTTATCTCGC
* * * * * * *
34283 TAGAGATAGATTCCCAT-GAAATATAAGATTTTATCTTGCTTGAGATAGTTTCA
65 TTGAGATAGTTTCCC-TCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * * * * *
34336 CTTGAAACAAAATATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAAAATATTTTTTCTCGTT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* *
34401 TGAGATAGTTTCCCTCGAAACAGATGATTTTGTCTCGCTTGAGATAATTTT-C
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGAT-ATTTTCC
* ** * * * * * * *
34453 CTTGAAATTGATGATTTTTTCTTGCTTGAGAT-GTTTTCC-ACTAAA-ATTGAAGATCTTATATC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TTTCCTTCGAAACA--GAAGATTTTATCTC
* * * **
34515 GGTTGAGATAGTTTCTCTCGAAACAGAGGATTTTATCTCGCTTGAGATCGTTTCC
63 GCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * * *
34570 CTCGAAA-ATTAAGATTTTATATTGCTTAAGATAATTTTCC-TCGGAACAGAAGATTTTATCTCG
1 CTCGAAACA-GAAGATTTTATCTCGCTTGAGAT-AGTTTCCTTCGAAACAGAAGATTTTATCTCG
* *
34633 CTTGAGATAGTTTCCCTCGAAATAGAAGATTTTATCTCGCTTGAGATAGTTTCC
64 CTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * *
34687 CTCGAAACAGAATATTTTGTCTCGCTTGGGATAGTTTCCCTCGAAACAGAAGATTTTGTCTCGCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* * * * * * *
34752 TGGGATAGTTTCCCTTGAAATAGAAGATTTTTGTCTCGCTTGGGATAGTTTCG
66 TGAGATAGTTTCCCTCGAAACAGAAGA-TTTTATCTCGCTTGAGATATTTTCC
* * * * * * * * * * *
34805 GTCAAAATAGAATATTTTGTCTTGCTTTAGATAGTTTCCCTCGTAACAGAAGAATTTATCTCCCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
** * *
34870 TGAGATAGTTTCATTCGAAACAGAAGATTTTATCTCACTTGAGATAGTTTCC
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* *
34922 CAT-GAAACAGAATATTTTATCTCGCTTGAGATA-TTTTCTCTCGAAACAGAAGATTTTATCTCG
1 C-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCT-TCGAAACAGAAGATTTTATCTCG
* * * *
34985 CTTGAGATATTTTCCCTTGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCC
64 CTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * * **** *
35039 CTTGAAAGAAAACATTTTATCTTAG-TTGAGATAGTTTCCCTT-GGTTGAGATAG-TTTT-CCTC
1 CTCGAAACAGAAGATTTTATC-TCGCTTGAGATAGTTT-CCTTCGAAACAGA-AGATTTTATCTC
**** *** **** * * * *
35100 GAAACAGA-AGTTTTTATGTCGCTTGAGATAG-TTTT-TCTCGAAACATAAAAAATTTT--
63 GCTTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTATCTCG---CTTGAGATATTTTCC
*** * ** ** ** * **** *
35156 CTCGCTTCATATAGATTTCGTCAAAG-AAGAAGAT-TTATTCC--CGCTTGAGATAG--TTT-CC
1 CTCGAAACAGA-AGATTTTATC-TCGCTTG-AGATAGT-TTCCTTCGAAACAGA-AGATTTTATC
* **** ** **** ** * * * * *
35214 TTGAAACAGA-AGATTTTGTCTCGCTTGAGATAG--TTTCCCTTGAAATAGAAGAT-TATGCC
61 TCGCTTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTATCTCG--CTTG-AGATATTTTCC
** ** **** * * ** **** **
35273 TCTC-TTA-AGATAG--TTTCCCTCGAAACAGAAAATTTTGTCTCGCTTGAGATAG--TTTCCCT
1 -CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAGTTTCCT-TCGAAACAGA-AGATTTTATCT
**** ** * **** **
35332 CGAAACAGA-AGATTTTTTCTCG---CTTG-AGATTGTT-TCCCTCGAAACAGAATATTTTTT
62 CGCTTGAGATAG--TTTCCCTCGAAAC-AGAAGATT-TTAT--CTCGCTTGAG-ATATTTTCC
**** ** * **** ** *
35389 CTCGCTTGAGATAG-TTTCCT-TAGAAACAGA-AGATTTTATCTCG---CTTG-AGA---TAGTC
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG-TTTCCT-TCGAAAC-AGAAGATTTTA-TC
* * * ** * ** ** * *
35444 TCCCTCGAAATAAAAGATTTTTTCTC---ACTTG-AGATAGTTTCCCTCAAAATAGAAGATCTTA
61 TCGCTTGAGAT---AG--TTTCCCTCGAAAC-AGAAGAT--TTTATCTC--GCTTG-AGATATT-
*
35505 TATCG
114 T-TCC
* ** **** ** **** *
35510 CTTG----AGATAG--TTTCCCTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG--TTT-CCT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG-TTTCCT-TCGAAACAGA-AGATTTTATCT
*** ** **** * * ** ** * **
35565 ACGAAACAAAAGAT--TTTATCTCGCTTGA-AATAGTTTCCCTCGAAAT-AGAAGATTTTAT
62 -CG---CTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCG-CTTGAG-ATATTTTCC
* **** ** **** ** **** **
35623 TTCGCTTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTGTCTCGCTTGAGATA-A-TTTCCCT
1 CTCGAAACAGA-AGATTTTATCTCGCTTGAGATAG-TTTCCT-TCGAAACAGA-AGATTTTATCT
** ** **** ** **** * **
35683 CGAAAT-AGA-AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGAAACAGAAGATTTTTT
62 CG-CTTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTATCTCGCTTGAG-ATATTTTCC
**** * ** **** ** * *
35740 CTCGTTTGAG-ATATTTTCCCTCGAAACAGA-AGATTTTTTCTCG---CTTGAA-ATGGTT-TC-
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TTTCCT-TCGAAAC-AGAAGAT-TTTATCT
* * * * *** ** * * *
35797 C-CTTGAAATATAATATTTTACATC-ACTTGAGATAG-TTTCTATCGAGATAGAAGAT-TTTT-T
62 CGCTTG----A-GATAGTTTCCCTCGA-AACAGA-AGATTT-TATCTCGCTTG-AGATATTTTCC
* **** *** * ** **** **
35857 GTCGCTTGAGATAG-TTTT-TCTC-CAAACAGA-ACATTTTGTCTCGCTTGAGATAG--TTTCCC
1 CTCGAAACAGA-AGATTTTATCTCGC-TTGAGATA-GTTTCCT-TCGAAACAGA-AGATTTTATC
**** ** **** * **** * **
35916 TCGAAACAGA-AGATTTTGTCTCGCTTGAGATA-ATTTTCT-TCGAAACAGAACATTTTAT
61 TCGCTTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTATCTCGCTTGAG-ATATTTTCC
* * * ** ** **** *
35974 CTCG---CTTG-AGATTGTTTCTCTCGATACAGA-AGATTTTATCTCGCGTGAGATAG--TTT-C
1 CTCGAAAC-AGAAGA-T-TTTATCTCGCTTGAGATAG-TTTCCT-TCGAAACAGA-AGATTTTAT
* ** * * *
36031 CTACGATAT-AGA-AGATTCTATCTCG---CTTG-AGATGGTT-TC-C-CTTGAAAATAATATTT
60 CT-CGCT-TGAGATAG-TT-TCCCTCGAAAC-AGAAGAT-TTTATCTCGCTTG---A-GATATTT
**
36087 TAT
115 TCC
* ** * * * * * *
36090 CTC---ACTTG-AGATGGTTTCCCTCGAAAC-AGAAGATCTTGTCTCGCTT-GAGAGAGTTTGAG
1 CTCGAAAC-AGAAGAT--TTTATCTCG---CTTG-AGA--TAGTTTC-CTTCGAAACAG---AAG
* * * * * *
36149 ATTTTCTCTCACTTGAGATAGTTTCCCTCGAAACATAAGATTTTTTCTCGTTTGAGATAGTTTCC
53 ATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * *
36214 TTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTT--AAATAGAATATTTTAACTCGC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CCTTCGAAACAGAAGATTTTATCTCGC
** * * * *
36277 TTGAGATAGTTTCCCTTAAAATAGAAGATTTTGTTTCGCTTGAGATAGTTTCC
65 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * *
36330 CTCGAAACAGAAGATTTTATCTCGCTTTAGAT-GATTTCCCTT-GAAACAAAATATTTTATCTCG
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAG-TTT-CCTTCGAAACAGAAGATTTTATCTCG
* **
36393 CTTGAGATGGTTTCCCTCGAAACAGAAGATTTTGCCTCGCTT-A-ATATTGTTTCC
64 CTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATA-T-TTTCC
* * * * * **
36447 CTCCAAATAGAAGATTTTGTCTCGCTTGAGATAGTTTCCCTCGAAACAGTAGATTTTGCCTCGCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* * *
36512 TGAGATAGTTTCCGTCGAAACAGAACATTTTTTCTCGCTTGAGAT-TGTTTCC
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAT-TTTCC
* * * * * *
36564 CTCTAAACAGAAGTTTTTATTTCGCTTGAGATAGTTTCCCTCGAAATAGAATATTTTATCTCGCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* * * *
36629 TCAGATTGTTTCCCTCGAAAGAGAATATTTTATCTCGCTTGAGATAGTTTT-C
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATA-TTTTCC
* * * *
36681 CTCGAAACAGAAGATTTTGTCTCGCTTGAGATAGTTTCCCTCCAAACAGAAGATTTTGTCTCGCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* *
36746 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTTGCTTGAGATAGTTTCC
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * * * *
36798 ATCGAAACAAAAGATTTTATCGCACTTGAGATCGTTTCCCTCGACACAGAAGATTTTATCTCGCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* ** * * * *
36863 AGAGATACATTCCCTCGAAACAGAAGATTTTAGCTCTCTTAAGATAGTTTCC
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * *
36915 CTCGAAACAGAAGATTTTATCTCGTTTAAGATAGTTTCCCTCGAAACTA-AAGATTTAATCTCCC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAAC-AGAAGATTTTATCTCGC
* * *
36979 TTGAGATAGTTTCACGCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCC
65 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * ** * *
37032 CTCGAAACAGAAGATTTTTTCAT-TCTTGAGATAGTTTCCCACAAAACAGAAGATTTTTTCTCGC
1 CTCGAAACAGAAGATTTTATC-TCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGC
** * *
37096 TTGAGATAGTTTCATTCGAAACCGAAGATTTTATCTCGCTTGAGATAGTTTCC
65 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* ** * * * *
37149 CT-GAAATAGAATCTTTTAACTCACTTGAGATAGTTT-CTCTCGAAATAGAAGATTTTGTCTCGC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCT-TCGAAACAGAAGATTTTATCTCGC
* * * * * *
37212 TAGAGATAGTTT-CCTCCAAATAGAATATTTTGTCTCGCTTGAGATAGTTTCC
65 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * * *
37264 CTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGTTTCCGTAGAAACAGAACAATTTATCTCGCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* * * * *
37329 TGAAATTGTTTCCCTCGAAACAGAATATTTTATCTCTCTTGAGATAGTTTCC
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * *
37381 CTCGAAAAAGAAGATTTTATCTCGCTTGAGGTAGTTTCCCTT-GAAATAAAAGATTTTATATCGC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CCTTCGAAACAGAAGATTTTATCTCGC
* * * * **
37445 TTGAGATAGTTTCCCACGAAATAGAAGATTCTATCAT-GCTTTAGATGGTTTCC
65 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATC-TCGCTTGAGATATTTTCC
* * * * * *
37498 CTTGAAA-TGAATATTTTATCTCGCTTGAGATGGTTTCCCTCGAAACAGAAGATTTTGTCTCGCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* * * *
37562 TGAGATAG-TT---T-------G-AGATTATGTCTTGCTTGAGATAGTTTCC
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * *
37602 CTCGAAACAAAAGATTTTTTCTCGCTTAAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* * * * * *
37667 TGAGATAGTTTCCCT-GAAATAGAATATTTTAACTCGCTTAAGATAGTTTCT
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
** ** * * * *
37718 CTCGAAGTAGAAGATTTTGCCTCGCTTGAGATAGTTTCCCTCCAAATAGAAGATTTTGTCTCGCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
** *
37783 TGAGATAGTTTCCCTCGAAACA-ATAGATTTTGCCTCGCTTGAGATAGTTTCC
66 TGAGATAGTTTCCCTCGAAACAGA-AGATTTTATCTCGCTTGAGATATTTTCC
* * * * * * * *
37835 GTCGAAACAGAACATTTTTTCTCACTTGAGATTGTTTCCCTCGAAACAGAAGTTTTTATTTCGCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
*
37900 TGAGATAGTTTCCCTCGAAATAGAAGATTTTATCTCGCTTGAGATAGTTTT-C
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATA-TTTTCC
* * * * * *
37952 CTCGAAAGAGAATATTTTATATCGCTTGAGATAGTTT-CTCTCGAAACAGTAGATTTTGTCTCTC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCT-TCGAAACAGAAGATTTTATCTCGC
* * *
38016 TTGAGATAGTTTCCCTCCAAACAGAAGTTTTTATCTTGCTTGAGATAGTTTT-C
65 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATA-TTTTCC
* * * * *
38069 TTTGAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCCGTCGAAACAGAAGATTTTATCGCGCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* ** * * * **
38134 TGAGATCGTTTCCCTCGTCACAGATGATTTTATCTCACTAGAGATACATTCC
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * *
38186 CTTGAAACAGAAGATTTTATCTCTCTTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGTT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* * * *
38251 TGAGATAGTTTCCCTCGAAACTA-AAGGTTTAATCTCCCTTGAGATAGTTTCC
66 TGAGATAGTTTCCCTCGAAAC-AGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * * * *
38303 CACGAAAGAGAAGATTTTATCTCGCTTGAGATGGTTTCCCTT-GAAATATAATATTTTATCTCGT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTT-CCTTCGAAACAGAAGATTTTATCTCGC
* * * *
38367 TTGAGATGGTTTCCCTCGAAACAAAAGATTTTGTCTCGCTTGAGATAGTTTCC
65 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* ** ** * * *
38420 CTCGAAACAGAAGATTTTCTCTTTCTTGAGATAGTTTCCCACAAAACAGAAGATTTTTTCTCTCT
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
* * *
38485 TGAGATAGTTTCCTTCGAAACAAAAGATTTTATCTCGCTTGAGATAGTTTCC
66 TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * * ** * *
38537 CT-GAAATAGAATATTTTACCTCACTTGAGATAGTTT-CTCTCGAGATTGAAGATTTTGTGTCGC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCT-TCGAAACAGAAGATTTTATCTCGC
* * * * *
38600 TTGAGATAGTTTTCCTCCAAATAGAAGATTTTGTCTCGCTTGAGATAGTTTCC
65 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
* * * * *
38653 CTCGAAACAGAAGATTTTGTCTCGCTTGAGATAGTGTT-CATCAAAATAGAACATTTTATCTCGC
1 CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGT-TTCCTTCGAAACAGAAGATTTTATCTCGC
38717 TTGAGATAGTTTCCC
65 TTGAGATAGTTTCCC
38732 ATGAAATAAA
Statistics
Matches: 6592, Mismatches: 1405, Indels: 788
0.75 0.16 0.09
Matches are distributed among these distances:
103 1 0.00
104 28 0.00
105 58 0.01
106 2 0.00
109 1 0.00
110 2 0.00
111 96 0.01
112 3 0.00
113 97 0.01
114 32 0.00
115 115 0.02
116 686 0.10
117 4803 0.73
118 357 0.05
119 67 0.01
120 33 0.01
121 11 0.00
122 10 0.00
123 9 0.00
124 23 0.00
125 22 0.00
126 19 0.00
127 8 0.00
128 8 0.00
129 7 0.00
130 39 0.01
131 40 0.01
132 10 0.00
133 5 0.00
ACGTcount: A:0.28, C:0.18, G:0.17, T:0.37
Consensus pattern (117 bp):
CTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGCT
TGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCC
Found at i:31280 original size:39 final size:38
Alignment explanation
Indices: 31237--32253 Score: 1032
Period size: 39 Copynumber: 26.3 Consensus size: 38
31227 TTTCTCTTGG
* *
31237 TTGAGATAGCTTTTCTCGAAACAGAAGATTTTATTTCGC
1 TTGAGATAG-TTTCCTCGAAACAGAAGATTTTATCTCGC
* *
31276 TTGAGATAGTTTTCATCGAAACAGAA-ATTTTTTTCTCGC
1 TTGAGATAG-TTTCCTCGAAACAGAAGA-TTTTATCTCGC
* * * *
31315 TTCAGATAGATTCCCTCGAAACAGAAGATTTTTTCTTGC
1 TTGAGATAG-TTTCCTCGAAACAGAAGATTTTATCTCGC
* * * * * **
31354 TTGATATAGTTTCCCTTGAAACATATGATTTTGTCTCAT
1 TTGAGATAGTTT-CCTCGAAACAGAAGATTTTATCTCGC
* * *
31393 TTGAGATAGTTTTTCTCAAAACAGAAGATTTTATCTCAC
1 TTGAGATAG-TTTCCTCGAAACAGAAGATTTTATCTCGC
*
31432 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTGTCTCGC
1 TTGAGATAGTTT-CCTCGAAACAGAAGATTTTATCTCGC
* * *
31471 TTGAGATTA-TTTCCCTCAAAATAGAAGATTTTTTCTCGC
1 TTGAGA-TAGTTT-CCTCGAAACAGAAGATTTTATCTCGC
*
31510 TTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCAC
1 TTGAGATAGTTTCC-TCGAAACAGAAGATTTTATCTCGC
* * *
31549 TT--G--A-TTCCCTCGAAATATAAGATTTTATCTCGC
1 TTGAGATAGTTTCCTCGAAACAGAAGATTTTATCTCGC
*
31582 TTAAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
1 TTGAGATAGTTT-CCTCGAAACAGAAGATTTTATCTCGC
*
31621 TT--GATA--TTCTCTCGAAACAGAAGATTTTATATCGC
1 TTGAGATAGTTTC-CTCGAAACAGAAGATTTTATCTCGC
31656 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
1 TTGAGATAGTTT-CCTCGAAACAGAAGATTTTATCTCGC
* *
31695 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTGTCTTGC
1 TTGAGATAGTTT-CCTCGAAACAGAAGATTTTATCTCGC
* * ** * *
31734 ATGGGATAGTTTCCCTCGAAGTAGAATATTTTGTCTCGC
1 TTGAGATAGTTT-CCTCGAAACAGAAGATTTTATCTCGC
* * *
31773 TTGAGATAGGTTCCCTCGAAACAGAAGAATTTATCTCAC
1 TTGAGATA-GTTTCCTCGAAACAGAAGATTTTATCTCGC
* * *
31812 TTAAGATATTTTACCTCGAAACAGAAGATTTTTTCTCGC
1 TTGAGATAGTTT-CCTCGAAACAGAAGATTTTATCTCGC
* * *
31851 TTGAGATAGTTTCCTTCGAAATATAACATTTTATCTCGC
1 TTGAGATAGTTTCC-TCGAAACAGAAGATTTTATCTCGC
** * *
31890 TTGAGATAGTTTCCCTTAAAACAGAATATTTTATCTCAC
1 TTGAGATAGTTT-CCTCGAAACAGAAGATTTTATCTCGC
* * * *
31929 TTGAGAAAATTTCTCTCGAAATAGAAGATTTTGTCTCGC
1 TTGAGATAGTTTC-CTCGAAACAGAAGATTTTATCTCGC
* * * * *
31968 TTGAGATAGTTTCCCTCAAAATATAAGATTTTGTCTTGC
1 TTGAGATAGTTT-CCTCGAAACAGAAGATTTTATCTCGC
* *
32007 TTGAGATAGTTTCCCTCGTAACAGAAGATTTTATCTCCC
1 TTGAGATAGTTT-CCTCGAAACAGAAGATTTTATCTCGC
* * * *
32046 TTGAGATTGTTTCAATCGAAACAGAAGATTTCATATCGC
1 TTGAGATAGTTTC-CTCGAAACAGAAGATTTTATCTCGC
* *
32085 TTGAGATAGTTTCC-CATGAAACAGAATATTTTATCTTGC
1 TTGAGATAGTTTCCTC--GAAACAGAAGATTTTATCTCGC
*
32124 TTGAGATATTTTCTCTCGAAACAGAAGATTTTATCTCGC
1 TTGAGATAGTTTC-CTCGAAACAGAAGATTTTATCTCGC
* * *
32163 TTGAGATATTTTCTCTTGAAACAGAAGATTTTACCTCGC
1 TTGAGATAGTTTC-CTCGAAACAGAAGATTTTATCTCGC
* * * *
32202 TTGAGATAGTTTCCTTTGAAACAAAATATTTTATCTCGG
1 TTGAGATAGTTTCC-TCGAAACAGAAGATTTTATCTCGC
32241 TTGAGATAGTTTC
1 TTGAGATAGTTTC
32254 TCTTGGTTGA
Statistics
Matches: 821, Mismatches: 125, Indels: 64
0.81 0.12 0.06
Matches are distributed among these distances:
33 23 0.03
34 5 0.01
35 30 0.04
37 11 0.01
38 19 0.02
39 718 0.87
40 14 0.02
41 1 0.00
ACGTcount: A:0.29, C:0.18, G:0.16, T:0.38
Consensus pattern (38 bp):
TTGAGATAGTTTCCTCGAAACAGAAGATTTTATCTCGC
Found at i:31313 original size:97 final size:96
Alignment explanation
Indices: 31140--31323 Score: 228
Period size: 97 Copynumber: 1.9 Consensus size: 96
31130 TTTATCTCGC
* * *
31140 TTGAGATATTTTCTCTTGAAACAGAAGATTTTACCTCGTTTGAGATAGTTTCCTTTGAAACAAAA
1 TTGAGATATTTTCTC-TGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCATCGAAACAAAA
* *
31205 TATTCTATCTCGGTTGAGATAGTTTCTCTTGG
65 TATTCTATCTCGCTTCAGATAGTTTCTCTTGG
** *
31237 TTGAGATAGCTTTTCTC-GAAACAGAAGATTTTATTTCGCTTGAGATAGTTTTCATCGAAACAGA
1 TTGAGATA--TTTTCTCTGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCATCGAAACA-A
* *
31301 AAT-TTTTTTCTCGCTTCAGATAG
63 AATATTCTATCTCGCTTCAGATAG
31324 ATTCCCTCGA
Statistics
Matches: 74, Mismatches: 10, Indels: 6
0.82 0.11 0.07
Matches are distributed among these distances:
97 63 0.85
98 4 0.05
99 7 0.09
ACGTcount: A:0.28, C:0.15, G:0.17, T:0.40
Consensus pattern (96 bp):
TTGAGATATTTTCTCTGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCATCGAAACAAAAT
ATTCTATCTCGCTTCAGATAGTTTCTCTTGG
Found at i:31363 original size:136 final size:135
Alignment explanation
Indices: 31095--31371 Score: 326
Period size: 136 Copynumber: 2.0 Consensus size: 135
31085 GAATATTTTA
*
31095 TCTTGCTTGAGATATTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCTCTTGAA
1 TCTTGCTTGAGATACTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCTC-TGAA
* * * * * * *
31160 ACAGAAGATTTTACCTCGTTTGAGATAGTTTCCTTTGAAACAAAATATTCTATCTCGGTTGAGAT
65 ACAGAAGATTTTACCTCGCTTCAGATAGATTCCCTCGAAACAAAAGATTCTATCTCGCTTGAGAT
31225 AGTTTC
130 AGTTTC
* *
31231 TCTTGGTTGAGATAGCTTT-TCTCGAAACAGAAGATTTTATTTCGCTTGAGATAGTTTTCATC-G
1 TCTTGCTTGAGATA-CTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATA-TTTTC-TCTG
** * * * *
31294 AAACAGAA-ATTTTTTTCTCGCTTCAGATAGATTCCCTCGAAACAGAAGATTTTTTCTTGCTTGA
63 AAACAGAAGA-TTTTACCTCGCTTCAGATAGATTCCCTCGAAACAAAAGATTCTATCTCGCTTGA
*
31358 TATAGTTTC
127 GATAGTTTC
*
31367 CCTTG
1 TCTTG
31372 AAACATATGA
Statistics
Matches: 119, Mismatches: 18, Indels: 8
0.82 0.12 0.06
Matches are distributed among these distances:
135 1 0.01
136 108 0.91
137 8 0.07
138 2 0.02
ACGTcount: A:0.26, C:0.17, G:0.17, T:0.40
Consensus pattern (135 bp):
TCTTGCTTGAGATACTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCTCTGAAA
CAGAAGATTTTACCTCGCTTCAGATAGATTCCCTCGAAACAAAAGATTCTATCTCGCTTGAGATA
GTTTC
Found at i:31399 original size:175 final size:175
Alignment explanation
Indices: 31079--31404 Score: 417
Period size: 175 Copynumber: 1.9 Consensus size: 175
31069 AGTTTCCCAT
* * *
31079 GAAACAGAATATTTTATCTTGCTTGAGATATTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGA
1 GAAACAGAAGATTTTATCTTGCTTGAGATATTTTCTATCGAAACAGAAGATTTTATCTCGCTTCA
** * * * *
31144 GATATTTTCTCTTGAAACAGAAGATTTTACCTCGTTTGAGATAGTTTCCTTTGAAACAAAATATT
66 GATAGATTCCCTCGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCCTTGAAACAAAATATT
*
31209 CTATCTCGGTTGAGATAGTTTCTCTTGGTTGAGATAGCTTTTCTC
131 CTATCTCAGTTGAGATAGTTTCTCTTGGTTGAGATAGCTTTTCTC
*
31254 GAAACAGAAGATTTTAT-TTCGCTTGAGATAGTTTTC-ATCGAAACAGAA-ATTTTTTTCTCGCT
1 GAAACAGAAGATTTTATCTT-GCTTGAGATA-TTTTCTATCGAAACAGAAGA-TTTTATCTCGCT
** * * *
31316 TCAGATAGATTCCCTCGAAACAGAAGATTTTTTCTTGCTTGATATAGTTTCCCTTGAAAC-ATAT
63 TCAGATAGATTCCCTCGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCCTTGAAACAAAAT
* * *
31380 GATTTTGTCTCATTTGAGATAGTTT
128 -ATTCTATCTCAGTTGAGATAGTTT
31405 TTCTCAAAAC
Statistics
Matches: 128, Mismatches: 19, Indels: 8
0.83 0.12 0.05
Matches are distributed among these distances:
174 6 0.05
175 117 0.91
176 5 0.04
ACGTcount: A:0.28, C:0.15, G:0.16, T:0.40
Consensus pattern (175 bp):
GAAACAGAAGATTTTATCTTGCTTGAGATATTTTCTATCGAAACAGAAGATTTTATCTCGCTTCA
GATAGATTCCCTCGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCCTTGAAACAAAATATT
CTATCTCAGTTGAGATAGTTTCTCTTGGTTGAGATAGCTTTTCTC
Found at i:32258 original size:78 final size:78
Alignment explanation
Indices: 31237--32253 Score: 1144
Period size: 78 Copynumber: 13.2 Consensus size: 78
31227 TTTCTCTTGG
* * * *
31237 TTGAGATAGCTTT-TCTCGAAACAGAAGATTTTATTTCGCTTGAGATAGTTTTCATCGAAACAGA
1 TTGAGATAG-TTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
*
31301 A-ATTTTTTTCTCGC
65 AGA-TTTTATCTCGC
* * * * * * * *
31315 TTCAGATAGATTCCCTCGAAACAGAAGATTTTTTCTTGCTTGATATAGTTTCCCTTGAAACATAT
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAA
* **
31380 GATTTTGTCTCAT
66 GATTTTATCTCGC
** * *
31393 TTGAGATAGTTTTTCTCAAAACAGAAGATTTTATCTCACTTGAGATAGTTTCCCTCGAAACAGAA
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAA
*
31458 GATTTTGTCTCGC
66 GATTTTATCTCGC
* * * *
31471 TTGAGATTA-TTTCCCTCAAAATAGAAGATTTTTTCTCGCTTGAGATAGTTTCCTTCGAAACAGA
1 TTGAGA-TAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
*
31535 AGATTTTATCTCAC
65 AGATTTTATCTCGC
* * *
31549 TT--G--A--TTCCCTCGAAATATAAGATTTTATCTCGCTTAAGATAGTTTCCCTCGAAACAGAA
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAA
31608 GATTTTATCTCGC
66 GATTTTATCTCGC
* *
31621 TT--GATA--TTCTCTCGAAACAGAAGATTTTATATCGCTTGAGATAGTTTCCCTCGAAACAGAA
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAA
31682 GATTTTATCTCGC
66 GATTTTATCTCGC
* * * * **
31695 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTGTCTTGCATGGGATAGTTTCCCTCGAAGTAGAA
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAA
* *
31760 TATTTTGTCTCGC
66 GATTTTATCTCGC
* * * * * *
31773 TTGAGATAGGTTCCCTCGAAACAGAAGAATTTATCTCACTTAAGATATTTTACCTCGAAACAGAA
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAA
*
31838 GATTTTTTCTCGC
66 GATTTTATCTCGC
* * * * **
31851 TTGAGATAGTTTCCTTCGAAATATAACATTTTATCTCGCTTGAGATAGTTTCCCTTAAAACAGAA
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAA
* *
31916 TATTTTATCTCAC
66 GATTTTATCTCGC
* * * * * * * *
31929 TTGAGAAAATTTCTCTCGAAATAGAAGATTTTGTCTCGCTTGAGATAGTTTCCCTCAAAATATAA
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAA
* *
31994 GATTTTGTCTTGC
66 GATTTTATCTCGC
* * * **
32007 TTGAGATAGTTTCCCTCGTAACAGAAGATTTTATCTCCCTTGAGATTGTTTCAATCGAAACAGAA
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAA
* *
32072 GATTTCATATCGC
66 GATTTTATCTCGC
* * * *
32085 TTGAGATAGTTTCCCAT-GAAACAGAATATTTTATCTTGCTTGAGATATTTTCTCTCGAAACAGA
1 TTGAGATAGTTTCCC-TCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGA
32149 AGATTTTATCTCGC
65 AGATTTTATCTCGC
* * * * * * *
32163 TTGAGATATTTTCTCTTGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCTTTGAAACAAAA
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAA
* *
32228 TATTTTATCTCGG
66 GATTTTATCTCGC
32241 TTGAGATAGTTTC
1 TTGAGATAGTTTC
32254 TCTTGGTTGA
Statistics
Matches: 787, Mismatches: 141, Indels: 22
0.83 0.15 0.02
Matches are distributed among these distances:
72 65 0.08
73 1 0.00
74 66 0.08
76 5 0.01
77 3 0.00
78 643 0.82
79 4 0.01
ACGTcount: A:0.29, C:0.18, G:0.16, T:0.38
Consensus pattern (78 bp):
TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAGAA
GATTTTATCTCGC
Found at i:32276 original size:21 final size:20
Alignment explanation
Indices: 32230--32276 Score: 60
Period size: 19 Copynumber: 2.4 Consensus size: 20
32220 AAACAAAATA
*
32230 TTTTATCTCGGTTGAGATAG
1 TTTTCTCTCGGTTGAGATAG
*
32250 -TTTCTCTTGGTTGAGATAG
1 TTTTCTCTCGGTTGAGATAG
32269 CTTTTCTC
1 -TTTTCTC
32277 CAAATAGAAG
Statistics
Matches: 23, Mismatches: 2, Indels: 3
0.82 0.07 0.11
Matches are distributed among these distances:
19 17 0.74
21 6 0.26
ACGTcount: A:0.15, C:0.15, G:0.21, T:0.49
Consensus pattern (20 bp):
TTTTCTCTCGGTTGAGATAG
Found at i:32338 original size:39 final size:39
Alignment explanation
Indices: 32260--38731 Score: 3730
Period size: 39 Copynumber: 166.4 Consensus size: 39
32250 TTTCTCTTGG
* * * *
32260 TTGAGATAGCTTT-TCTCCAAATAGAAGATTTTATTTCGC
1 TTGAGATAG-TTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
32299 TTGAGATAGTTTTCATCGAAACATAA-ATTTTTTTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGA-TTTTATCTCGC
* * * *
32338 TTCAGATAGATTCCCTCGAAACAGAAGATTTTTTCTTGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * * * *
32377 TTGATATAGTTTCCCTTGAAACATATGATTTTGTCTCGT
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
** *
32416 TTGAGATAGTTTTTCTCAAAACAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
32455 ATGAGATAGTTTCCCTCGAAACAAAAGATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
32494 TTGAGATTA-TTTCCCTCAAAACAGAAGATTTTTTCTCGC
1 TTGAGA-TAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
32533 TTGATATAGTTTCCTTCGAAATAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
32572 TT--G--A--TTCCCTCGAAATATAAGATTTTTTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
32605 TTGAGATAGTTTCCCAT-GAAACAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCC-TCGAAACAGAAGATTTTATCTCGC
** * * **
32644 TTGAGATAGTTTCTTTCGAAATAGAAGATTTTATATTTC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * ** *
32683 TTGAGATAGTTTCCCTTGAAACATAATTTTTTATCTTGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
32722 TTGAGATACTTTCCCTCCAAAAAAGAAGATTTTATCTAGC
1 TTGAGATAGTTTCCCT-CGAAACAGAAGATTTTATCTCGC
* *
32762 TTGTGATAGTTTCCCTAGAAACAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * * *
32801 TTGAGATAGATACCCACGAAATAGAAGATTTTATCTTGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
** * * *
32840 TTGAGATAGTTTCAATTGAAACAAAATATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
32879 TTGAGATTGTTTCCCTCGAAACAGAAGATTTTTTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
32918 TTGAGATAGTTTCCCTTGAAACAGAAAATTTTTTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * ** *
32957 TTGAGATAGTTTCGCTTGAAATTGAAGATTTTTTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* ** * *
32996 TTGAGA-AGTTTTCCCTCAAAATTGAAGATATTATTTCGC
1 TTGAGATAG-TTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
33035 TTGAGATTGTTTCCTTCGAAACAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* ** * * *
33074 TTGAGATCGTTTCTGTCGAAA-ATTAAGATTTTATATTGC
1 TTGAGATAGTTTCCCTCGAAACA-GAAGATTTTATCTCGC
* * *
33113 TTGAGATAGTTTTCCTCGGAATAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * * *
33152 TTAAGATAGTTTACCTCAAAACAGAAGATTTCATTTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * * *
33191 TTGATATAGTTTCTCTCAAAATAGAAGATTTTATATCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
*
33230 TTGAGATAGTTTCCCTCGAAACAGGAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
33269 TTGAGATAGTTTCCCTTGAAACAAAAGATTTTGAT-TCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTT-ATCTCGC
* * *
33308 TTGGGATAGTTTCCCTCGAATCAGAAGATTTTATATCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
33347 TTGAGATACTTTCTCTCGAAATAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
** * *
33386 TTGAGATAGTTTCAGTTGAAACAGAAGATTTTATCTCAC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * * *
33425 TTGAGATAGATTCCCACGAAATATAAGATTTTATCTTGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
33464 TTGAGATAGTTTCACTTGAAACAAAATATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
33503 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTTTCTCGT
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
33542 TTGAGATAGTTTCCCTCGAAACAGATGATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* ** * *
33581 TTGAGATAGTTTCCC-CTTAAATTGAAGATTTTTTCTTGC
1 TTGAGATAGTTTCCCTC-GAAACAGAAGATTTTATCTCGC
* ** * * *
33620 TTGAGAT-GTTTTCCAC-CAAAATTGAAGATCTTATATTGC
1 TTGAGATAG-TTTCC-CTCGAAACAGAAGATTTTATCTCGC
*
33659 TTGAGATAGTTTCCCTCGAAACAGAGGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
33698 TTGAGATCGTTTCCCTCGAAA-ATTAAGATTTTATATTGC
1 TTGAGATAGTTTCCCTCGAAACA-GAAGATTTTATCTCGC
* * *
33737 TTGAGATAATTTTCCTCGGAACAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
33776 TTGAGATAGTATCCCTCGAAACAGAAGATTTTATATCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
33815 TTGAGATAGTTTCCGTTGAAACAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
33854 TTGAGATAGTTTCCCTCGAAACAGAGGATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
33893 TTGGGATAGTTTCCTTCGAAACAGAAGATTTTTTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *** * * * **
33932 TTGAGATCGTTTTTGTCGAAA-ATTATGATTTTATATTTC
1 TTGAGATAGTTTCCCTCGAAACA-GAAGATTTTATCTCGC
* * *
33971 TTGAGATAGTTTTCCTCGAAATAGAAGATTTTATCTCTC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * * * *
34010 TTAAGATAGTTTACCTCAAAAGAAAAGATTTTATTTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
34049 TTGATATAGTTTCTCTC-AGAATAGAAGATTTTATATCGC
1 TTGAGATAGTTTCCCTCGA-AACAGAAGATTTTATCTCGC
* * * *
34088 TTGAGATAATTTCGCTTGAAACAGGAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * * *
34127 TTGATATAGTTTACCTTGAAACAAAAGATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
34166 TTGGGATAGTTTCCCTCGAATCAGAAGATTTTATATCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
34205 TTGAGATACTTTCCCTCGAAACAGAAGATTTTATTTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* ** *
34244 TTGAGATAGTTTCCGTTAAAACAGAAGATTTTATCTAGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * * *
34283 TAGAGATAGATTCCCAT-GAAATATAAGATTTTATCTTGC
1 TTGAGATAGTTTCCC-TCGAAACAGAAGATTTTATCTCGC
* * * *
34322 TTGAGATAGTTTCACTTGAAACAAAATATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
34361 TTGAGATAGTTTCCCTCGAAACAAAATATTTTTTCTCGT
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
34400 TTGAGATAGTTTCCCTCGAAACAGATGATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * ** * * *
34439 TTGAGATAATTTTCCTTGAAATTGATGATTTTTTCTTGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* ** * * *
34478 TTGAGAT-GTTTTCCACT-AAAATTGAAGATCTTATATCGG
1 TTGAGATAG-TTTCC-CTCGAAACAGAAGATTTTATCTCGC
* *
34517 TTGAGATAGTTTCTCTCGAAACAGAGGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
34556 TTGAGATCGTTTCCCTCGAAA-ATTAAGATTTTATATTGC
1 TTGAGATAGTTTCCCTCGAAACA-GAAGATTTTATCTCGC
* * * *
34595 TTAAGATAATTTTCCTCGGAACAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
*
34634 TTGAGATAGTTTCCCTCGAAATAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
34673 TTGAGATAGTTTCCCTCGAAACAGAATATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
34712 TTGGGATAGTTTCCCTCGAAACAGAAGATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
34751 TTGGGATAGTTTCCCTTGAAATAGAAGATTTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGA-TTTTATCTCGC
* ** * * * * *
34791 TTGGGATAGTTTCGGTCAAAATAGAATATTTTGTCTTGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
34830 TTTAGATAGTTTCCCTCGTAACAGAAGAATTTATCTCCC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
** *
34869 TTGAGATAGTTTCATTCGAAACAGAAGATTTTATCTCAC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
*
34908 TTGAGATAGTTTCCCAT-GAAACAGAATATTTTATCTCGC
1 TTGAGATAGTTTCCC-TCGAAACAGAAGATTTTATCTCGC
* *
34947 TTGAGATATTTTCTCTCGAAACAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
34986 TTGAGATATTTTCCCTTGAAACAGAAGATTTTACCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * * *
35025 TTGAGATAGTTTCCCTTGAAAGAAAACATTTTATCTTAG-
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATC-TCGC
* **** * *
35064 TTGAGATAGTTTCCCTTGGTTGAGATAG-TTTT-CCTCGA
1 TTGAGATAGTTTCCCTCGAAACAGA-AGATTTTATCTCGC
*** *** ****
35102 AACAGA-AGTTTTTATGTCGCTTGAGATAG-TTTT-TCTCGAAAC
1 TTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTATCTCG---C
* * * * * *** * ** **
35144 AT-AAAAAATTT-TCTCGCTTCATATAGATTTCGTCAAAG-
1 TTGAGATAGTTTCCCTCGAAACAGA-AGATTTTATC-TCGC
** * **** * * *
35182 AAGAAGAT--TTATTCC-CGCTTGAGATAG--TTT-CCTTGA
1 TTG-AGATAGTT-TCCCTCGAAACAGA-AGATTTTATCTCGC
*** ** * *
35218 AACAGA-AGATTTTGTCTCG---CTTG-AGATAGTT-TC-C-C
1 TTGAGATAG--TTTCCCTCGAAAC-AGAAGAT-TTTATCTCGC
* ** ** *
35253 TTGAAATAGAAGATTATGCCTCTC-TTA-AGATAG--TTTCCCTCGA
1 TTGAGAT---AG-TT-T-CC-CTCGAAACAGA-AGATTTTATCTCGC
*** * * ** **** ** *
35296 AACAGAAAATTTTGTCTCGCTTGAGATAG--TTTCCCTCGA
1 TTGAG-ATAGTTTCCCTCGAAACAGA-AGATTTTATCTCGC
*** ** * *
35335 AACAGA-AGATTTTTTCTCG---CTTG-AGATTGTT-TCCCTCGA
1 TTGAGATAG--TTTCCCTCGAAAC-AGAAGATT-TTAT--CTCGC
*** * ** **** ** * *
35374 AACAGAATATTTTTTCTCGCTTGAGATAG-TTTCCT-TAGA
1 TTGAG-ATAGTTTCCCTCGAAACAGA-AGATTTTATCTCGC
*** ** * *
35413 AACAGA-AGATTTTATCTCG---CTTG-AGA---TAGTCTCCC
1 TTGAGATAG--TTTCCCTCGAAAC-AGAAGATTTTA-TCTCGC
* * ** * ** **
35448 TCGAAATAAAAGATTTTTTCTC---ACTTG-AGATAGTTTCCCTCAAA
1 TTGAGAT---AG--TTTCCCTCGAAAC-AGAAGAT--TTTATCTC-GC
* *** **** ** *
35492 AT-AGA-AGATCTTATATCGCTTGAGATAG--TTTCCCTCGA
1 TTGAGATAG-T-TTCCCTCGAAACAGA-AGATTTTATCTCGC
*** ** **** *
35530 AACAGA-AGATTTTATCTCGCTTGAGATAG--TTT-CCTACGAAAC
1 TTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTATCT-CG---C
*** ** **** * * ** *
35572 AAAAGAT--TTTATCTCGCTTGA-AATAGTTTCCCTCGAA
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCG-C
* *** **** ** *
35609 AT-AGA-AGATTTTATTTCGCTTGAGATAG--TTTCCCTCGA
1 TTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTATCTCGC
*** ** **** ** *
35647 AACAGA-AGATTTTGTCTCGCTTGAGATA-A-TTTCCCTCGAA
1 TTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTATCTCG-C
* ** **** ** *
35687 AT-AGA-AGATTTTATCTCGCTTGAGATAG--TTTCCCTCGA
1 TTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTATCTCGC
*** ** **** * ** *
35725 AACAGA-AGATTTTTTCTCGTTTGAG-ATATTTTCCCTCGA
1 TTGAGATAG--TTTCCCTCGAAACAGAAGATTTTATCTCGC
*** ** * *
35764 AACAGA-AGATTTTTTCTCG---CTTGAA-ATGGTT-TC-C-C
1 TTGAGATAG--TTTCCCTCGAAAC-AGAAGAT-TTTATCTCGC
* * * * *** ** *
35799 TTGAAATATAATATTTTACATC-ACTTGAGATAG-TTTCTATCGAGA
1 TTG----A-GATAGTTTCCCTCGA-AACAGA-AGATTT-TATCTCGC
* *** ****
35844 TAGAAGAT--TTTTTGTCGCTTGAGATAG-TTTT-TCTC-C
1 TTG-AGATAGTTTCCCTCGAAACAGA-AGATTTTATCTCGC
*** * * ** **** ** *
35880 AAACAGAACATTTTGTCTCGCTTGAGATAG--TTTCCCTCGA
1 -TTGAG-ATAGTTTCCCTCGAAACAGA-AGATTTTATCTCGC
*** ** **** * *
35920 AACAGA-AGATTTTGTCTCGCTTGAGATA-ATTTTCT-TCGA
1 TTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTATCTCGC
*** * * ** * * *
35959 AACAGAACATTTTATCTCG---CTTG-AGATTGTTTCTCTCGA
1 TTGAG-ATAGTTTCCCTCGAAAC-AGAAGA-T-TTTATCTCGC
** ** **** * *
35998 TACAGA-AGATTTTATCTCGCGTGAGATAG--TTT-CCTACGA
1 TTGAGATAG--TTTCCCTCGAAACAGA-AGATTTTATCT-CGC
** * *
36037 TAT-AGA-AGATTCTATCTCG---CTTG-AGATGGTT-TC-C-C
1 T-TGAGATAG-TT-TCCCTCGAAAC-AGAAGAT-TTTATCTCGC
* * *** ** * **
36072 TTGAAAATAATATTTTATC-TCACTTG-AGATGGTTTCCCTCGAAAC
1 TTG-AGATAGT-TTCCCTCGAAAC-AGAAGAT--TTTATCTCG---C
* * * * * * * *
36117 -AGAAGAT-CTTGTCTCGCTTGAGAGAGTTTGAGATTTTCTCTCAC
1 TTG-AGATAGTT-TC-C-CTCGAAACAG---AAGATTTTATCTCGC
* * *
36161 TTGAGATAGTTTCCCTCGAAACATAAGATTTTTTCTCGT
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
*
36200 TTGAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
36239 TTGAGATAGTTTCCCT-TAAATAGAATATTTTAACTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
** * * *
36277 TTGAGATAGTTTCCCTTAAAATAGAAGATTTTGTTTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
36316 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
36355 TTTAGAT-GATTTCCCTTGAAACAAAATATTTTATCTCGC
1 TTGAGATAG-TTTCCCTCGAAACAGAAGATTTTATCTCGC
* **
36394 TTGAGATGGTTTCCCTCGAAACAGAAGATTTTGCCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * * * *
36433 TTAATATTGTTTCCCTCCAAATAGAAGATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* **
36472 TTGAGATAGTTTCCCTCGAAACAGTAGATTTTGCCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
36511 TTGAGATAGTTTCCGTCGAAACAGAACATTTTTTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
36550 TTGAGATTGTTTCCCTCTAAACAGAAGTTTTTATTTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
36589 TTGAGATAGTTTCCCTCGAAATAGAATATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
36628 TTCAGATTGTTTCCCTCGAAAGAGAATATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
36667 TTGAGATAGTTTTCCTCGAAACAGAAGATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
36706 TTGAGATAGTTTCCCTCCAAACAGAAGATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
*
36745 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTTGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
36784 TTGAGATAGTTTCCATCGAAACAAAAGATTTTATCGCAC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
36823 TTGAGATCGTTTCCCTCGACACAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* ** * *
36862 TAGAGATACATTCCCTCGAAACAGAAGATTTTAGCTCTC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
36901 TTAAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGT
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
36940 TTAAGATAGTTTCCCTCGAAACTA-AAGATTTAATCTCCC
1 TTGAGATAGTTTCCCTCGAAAC-AGAAGATTTTATCTCGC
* *
36979 TTGAGATAGTTTCACGCGAAACAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
37018 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTTTCAT-TC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATC-TCGC
* * *
37057 TTGAGATAGTTTCCCACAAAACAGAAGATTTTTTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
** *
37096 TTGAGATAGTTTCATTCGAAACCGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* ** * *
37135 TTGAGATAGTTTCCCT-GAAATAGAATCTTTTAACTCAC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
37173 TTGAGATAGTTTCTCTCGAAATAGAAGATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * * *
37212 TAGAGATAGTTT-CCTCCAAATAGAATATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
37250 TTGAGATAGTTTCCCTCGAAATAGAAGATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
37289 TTGAGATAGTTTCCGTAGAAACAGAACAATTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
37328 TTGAAATTGTTTCCCTCGAAACAGAATATTTTATCTCTC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
*
37367 TTGAGATAGTTTCCCTCGAAAAAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * * *
37406 TTGAGGTAGTTTCCCTTGAAATAAAAGATTTTATATCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
37445 TTGAGATAGTTTCCCACGAAATAGAAGATTCTATCAT-GC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATC-TCGC
* * * * *
37484 TTTAGATGGTTTCCCTTGAAA-TGAATATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
37522 TTGAGATGGTTTCCCTCGAAACAGAAGATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
37561 TTGAGATAG-TT---T-------G-AGATTATGTCTTGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
37588 TTGAGATAGTTTCCCTCGAAACAAAAGATTTTTTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
37627 TTAAGATAGTTTCCTTCGAAACAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
37666 TTGAGATAGTTTCCCT-GAAATAGAATATTTTAACTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * ** **
37704 TTAAGATAGTTTCTCTCGAAGTAGAAGATTTTGCCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
37743 TTGAGATAGTTTCCCTCCAAATAGAAGATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
**
37782 TTGAGATAGTTTCCCTCGAAACA-ATAGATTTTGCCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGA-AGATTTTATCTCGC
* * * *
37821 TTGAGATAGTTTCCGTCGAAACAGAACATTTTTTCTCAC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
37860 TTGAGATTGTTTCCCTCGAAACAGAAGTTTTTATTTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
*
37899 TTGAGATAGTTTCCCTCGAAATAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
37938 TTGAGATAGTTTTCCTCGAAAGAGAATATTTTATATCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
37977 TTGAGATAGTTTCTCTCGAAACAGTAGATTTTGTCTCTC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
38016 TTGAGATAGTTTCCCTCCAAACAGAAGTTTTTATCTTGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
38055 TTGAGATAGTTTTCTTTGAAACAAAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
38094 TTGAGATAGTTTCCGTCGAAACAGAAGATTTTATCGCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* ** * *
38133 TTGAGATCGTTTCCCTCGTCACAGATGATTTTATCTCAC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* ** * *
38172 TAGAGATACATTCCCTTGAAACAGAAGATTTTATCTCTC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
*
38211 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGT
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
38250 TTGAGATAGTTTCCCTCGAAACTA-AAGGTTTAATCTCCC
1 TTGAGATAGTTTCCCTCGAAAC-AGAAGATTTTATCTCGC
* *
38289 TTGAGATAGTTTCCCACGAAAGAGAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * * * *
38328 TTGAGATGGTTTCCCTTGAAATATAATATTTTATCTCGT
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * *
38367 TTGAGATGGTTTCCCTCGAAACAAAAGATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* **
38406 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTCTCTTTC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
38445 TTGAGATAGTTTCCCACAAAACAGAAGATTTTTTCTCTC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* *
38484 TTGAGATAGTTTCCTTCGAAACAAAAGATTTTATCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
38523 TTGAGATAGTTTCCCT-GAAATAGAATATTTTACCTCAC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * ** * *
38561 TTGAGATAGTTTCTCTCGAGATTGAAGATTTTGTGTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
38600 TTGAGATAGTTTTCCTCCAAATAGAAGATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
*
38639 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTGTCTCGC
1 TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
* * * *
38678 TTGAGATAGTGTT-CATCAAAATAGAACATTTTATCTCGC
1 TTGAGATAGT-TTCCCTCGAAACAGAAGATTTTATCTCGC
38717 TTGAGATAGTTTCCC
1 TTGAGATAGTTTCCC
38732 ATGAAATAAA
Statistics
Matches: 5198, Mismatches: 980, Indels: 510
0.78 0.15 0.08
Matches are distributed among these distances:
27 21 0.00
28 3 0.00
31 1 0.00
33 28 0.01
34 4 0.00
35 20 0.00
36 19 0.00
37 40 0.01
38 285 0.05
39 4554 0.88
40 123 0.02
41 24 0.00
42 23 0.00
43 19 0.00
44 14 0.00
45 8 0.00
46 1 0.00
47 7 0.00
49 4 0.00
ACGTcount: A:0.28, C:0.18, G:0.17, T:0.37
Consensus pattern (39 bp):
TTGAGATAGTTTCCCTCGAAACAGAAGATTTTATCTCGC
Found at i:32369 original size:136 final size:135
Alignment explanation
Indices: 32118--32394 Score: 319
Period size: 136 Copynumber: 2.0 Consensus size: 135
32108 GAATATTTTA
32118 TCTTGCTTGAGATATTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCTCTTGAA
1 TCTTGCTTGAGATATTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCTC-TGAA
* * * * * *
32183 ACAGAAGATTTTACCTCGCTTGAGATAGTTTCCTTTGAAACAAAATATTTTATCTCGGTTGAGAT
65 ACAGAAGATTTTACCTCGCTTCAGATAGATTCCCTCGAAACAAAAGATTTTATCTCGCTTGAGAT
32248 AGTTTC
130 AGTTTC
* * *
32254 TCTTGGTTGAGATAGCTTTTCTC-C-AAATAGAAGATTTTATTTCGCTTGAGATAGTTTTCATC-
1 TCTTGCTTGAGATA--TTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATA-TTTTC-TCT
* ** * * *
32316 GAAACATAA-ATTTTTTTCTCGCTTCAGATAGATTCCCTCGAAACAGAAGATTTTTTCTTGCTTG
62 GAAACAGAAGA-TTTTACCTCGCTTCAGATAGATTCCCTCGAAACAAAAGATTTTATCTCGCTTG
*
32380 ATATAGTTTC
126 AGATAGTTTC
*
32390 CCTTG
1 TCTTG
32395 AAACATATGA
Statistics
Matches: 119, Mismatches: 17, Indels: 10
0.82 0.12 0.07
Matches are distributed among these distances:
135 1 0.01
136 103 0.87
137 6 0.05
138 9 0.08
ACGTcount: A:0.26, C:0.17, G:0.16, T:0.41
Consensus pattern (135 bp):
TCTTGCTTGAGATATTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATATTTTCTCTGAAA
CAGAAGATTTTACCTCGCTTCAGATAGATTCCCTCGAAACAAAAGATTTTATCTCGCTTGAGATA
GTTTC
Found at i:32388 original size:175 final size:175
Alignment explanation
Indices: 32107--32427 Score: 425
Period size: 175 Copynumber: 1.8 Consensus size: 175
32097 CCCATGAAAC
* * * *
32107 AGAATATTTTATCTTGCTTGAGATATTTTCTCTCGAAACAGAAGATTTTATCTCGCTTGAGATAT
1 AGAAGATTTTATCTTGCTTGAGATATTTTCTATCGAAACAGAAGATTTTATCTCGCTTCAGATAG
* * * *
32172 TTTCTCTTGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCTTTGAAACAAAAT-ATTTTAT
66 ATTCCCTCGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCCTTGAAAC-AAATGATTTTAT
32236 CTCGGTTGAGATAGTTTCTCTTGGTTGAGATAGCTTTTCTCCAAAT
130 CTCGGTTGAGATAGTTTCTCTTGGTTGAGATAGCTTTTCTCCAAAT
* *
32282 AGAAGATTTTAT-TTCGCTTGAGATAGTTTTC-ATCGAAACATAA-ATTTTTTTCTCGCTTCAGA
1 AGAAGATTTTATCTT-GCTTGAGATA-TTTTCTATCGAAACAGAAGA-TTTTATCTCGCTTCAGA
** * * *
32344 TAGATTCCCTCGAAACAGAAGATTTTTTCTTGCTTGATATAGTTTCCCTTGAAACATATGATTTT
63 TAGATTCCCTCGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCCTTGAAACAAATGATTTT
* *
32409 GTCTCGTTTGAGATAGTTT
128 ATCTCGGTTGAGATAGTTT
32428 TTCTCAAAAC
Statistics
Matches: 125, Mismatches: 17, Indels: 8
0.83 0.11 0.05
Matches are distributed among these distances:
174 6 0.05
175 114 0.91
176 5 0.04
ACGTcount: A:0.27, C:0.15, G:0.16, T:0.42
Consensus pattern (175 bp):
AGAAGATTTTATCTTGCTTGAGATATTTTCTATCGAAACAGAAGATTTTATCTCGCTTCAGATAG
ATTCCCTCGAAACAGAAGATTTTACCTCGCTTGAGATAGTTTCCCTTGAAACAAATGATTTTATC
TCGGTTGAGATAGTTTCTCTTGGTTGAGATAGCTTTTCTCCAAAT
Found at i:32594 original size:33 final size:33
Alignment explanation
Indices: 32543--32608 Score: 105
Period size: 33 Copynumber: 2.0 Consensus size: 33
32533 TTGATATAGT
*
32543 TTCCTTCGAAATAGAAGATTTTATCTCGCTTGA
1 TTCCCTCGAAATAGAAGATTTTATCTCGCTTGA
* *
32576 TTCCCTCGAAATATAAGATTTTTTCTCGCTTGA
1 TTCCCTCGAAATAGAAGATTTTATCTCGCTTGA
32609 GATAGTTTCC
Statistics
Matches: 30, Mismatches: 3, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
33 30 1.00
ACGTcount: A:0.26, C:0.20, G:0.14, T:0.41
Consensus pattern (33 bp):
TTCCCTCGAAATAGAAGATTTTATCTCGCTTGA
Found at i:34957 original size:19 final size:19
Alignment explanation
Indices: 34933--34997 Score: 67
Period size: 19 Copynumber: 3.4 Consensus size: 19
34923 ATGAAACAGA
34933 ATATTTTATCTCGCTTGAG
1 ATATTTTATCTCGCTTGAG
* ****
34952 ATATTTTCTCTCGAAACAG
1 ATATTTTATCTCGCTTGAG
*
34971 AAGATTTTATCTCGCTTGAG
1 -ATATTTTATCTCGCTTGAG
34991 ATATTTT
1 ATATTTT
34998 CCCTTGAAAC
Statistics
Matches: 33, Mismatches: 12, Indels: 2
0.70 0.26 0.04
Matches are distributed among these distances:
19 20 0.61
20 13 0.39
ACGTcount: A:0.26, C:0.15, G:0.14, T:0.45
Consensus pattern (19 bp):
ATATTTTATCTCGCTTGAG
Found at i:35129 original size:175 final size:174
Alignment explanation
Indices: 34908--35255 Score: 406
Period size: 175 Copynumber: 2.0 Consensus size: 174
34898 TTTATCTCAC
*
34908 TTGAGATAGTTTCCCATGAAACAGAATATTTTATCTCGCTTGAGATA-TTTTCTCTCGAAACA-G
1 TTGAGATAGTTTCCCATGAAACAGAATATTTTATCTCGCTTGAGATAGTTTT-TCTCGAAACATA
* * * * * * *
34971 AAGATTTTATCTCGCTTGAGATA-TTTTCCCTTGAAA-CAGAAGATTT-TACCTCGCTTGAGATA
65 AAAAATTT-TCTCGCTTCAGATAGATTT--CGTCAAAGAAGAAGATTTATACC-CGCTTGAGATA
*
35033 GTTTCCCTTGAAAGAAAACATTTTATCTTAG-TTGAGATAGTTTCCCTTGG
126 GTTT-CCTTGAAACAAAACATTTTATC-TAGCTTGAGATAGTTTCCCTTGG
* *
35083 TTGAGATAGTTTTCC-TCGAAACAGAAGT-TTTTATGTCGCTTGAGATAGTTTTTCTCGAAACAT
1 TTGAGATAGTTTCCCAT-GAAACAGAA-TATTTTATCTCGCTTGAGATAGTTTTTCTCGAAACAT
* *
35146 AAAAAATTTTCTCGCTTCATATAGATTTCGTCAAAGAAGAAGATTTATTCCCGCTTGAGATAGTT
64 AAAAAATTTTCTCGCTTCAGATAGATTTCGTCAAAGAAGAAGATTTATACCCGCTTGAGATAGTT
* * * *
35211 TCCTTGAAACAGAAGATTTTGTCTCGCTTGAGATAGTTTCCCTTG
129 TCCTTGAAACAAAACATTTTATCTAGCTTGAGATAGTTTCCCTTG
35256 AAATAGAAGA
Statistics
Matches: 148, Mismatches: 17, Indels: 17
0.81 0.09 0.09
Matches are distributed among these distances:
173 2 0.01
174 42 0.28
175 87 0.59
176 17 0.11
ACGTcount: A:0.28, C:0.17, G:0.17, T:0.38
Consensus pattern (174 bp):
TTGAGATAGTTTCCCATGAAACAGAATATTTTATCTCGCTTGAGATAGTTTTTCTCGAAACATAA
AAAATTTTCTCGCTTCAGATAGATTTCGTCAAAGAAGAAGATTTATACCCGCTTGAGATAGTTTC
CTTGAAACAAAACATTTTATCTAGCTTGAGATAGTTTCCCTTGG
Found at i:35782 original size:20 final size:20
Alignment explanation
Indices: 35720--35782 Score: 56
Period size: 20 Copynumber: 3.2 Consensus size: 20
35710 GATAGTTTCC
35720 CTCGAAACAGAAGATTTTTT
1 CTCGAAACAGAAGATTTTTT
**** * **
35740 CTCGTTTGAG-ATATTTTCC
1 CTCGAAACAGAAGATTTTTT
35759 CTCGAAACAGAAGATTTTTT
1 CTCGAAACAGAAGATTTTTT
35779 CTCG
1 CTCG
35783 CTTGAAATGG
Statistics
Matches: 28, Mismatches: 14, Indels: 2
0.64 0.32 0.05
Matches are distributed among these distances:
19 12 0.43
20 16 0.57
ACGTcount: A:0.27, C:0.19, G:0.16, T:0.38
Consensus pattern (20 bp):
CTCGAAACAGAAGATTTTTT
Found at i:36189 original size:66 final size:66
Alignment explanation
Indices: 36083--36211 Score: 195
Period size: 66 Copynumber: 2.0 Consensus size: 66
36073 TGAAAATAAT
*
36083 ATTTTATCTCACTTGAGATGGTTTCCCTCGAAACAGAAGATCTTGTCTCGCTTGAGAGAGTTTGA
1 ATTTTATCTCACTTGAGATAGTTTCCCTCGAAACAGAAGATCTTGTCTCGCTTGAGAGAGTTTGA
36148 G
66 G
* * * * * *
36149 ATTTTCTCTCACTTGAGATAGTTTCCCTCGAAACATAAGATTTTTTCTCGTTTGAGATAGTTT
1 ATTTTATCTCACTTGAGATAGTTTCCCTCGAAACAGAAGATCTTGTCTCGCTTGAGAGAGTTT
36212 CCTTCGAAAC
Statistics
Matches: 56, Mismatches: 7, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
66 56 1.00
ACGTcount: A:0.24, C:0.18, G:0.19, T:0.40
Consensus pattern (66 bp):
ATTTTATCTCACTTGAGATAGTTTCCCTCGAAACAGAAGATCTTGTCTCGCTTGAGAGAGTTTGA
G
Found at i:37589 original size:27 final size:27
Alignment explanation
Indices: 37547--37599 Score: 88
Period size: 27 Copynumber: 2.0 Consensus size: 27
37537 TCGAAACAGA
*
37547 AGATTTTGTCTCGCTTGAGATAGTTTG
1 AGATTATGTCTCGCTTGAGATAGTTTG
*
37574 AGATTATGTCTTGCTTGAGATAGTTT
1 AGATTATGTCTCGCTTGAGATAGTTT
37600 CCCTCGAAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
27 24 1.00
ACGTcount: A:0.21, C:0.09, G:0.25, T:0.45
Consensus pattern (27 bp):
AGATTATGTCTCGCTTGAGATAGTTTG
Found at i:37950 original size:20 final size:20
Alignment explanation
Indices: 37927--37988 Score: 56
Period size: 20 Copynumber: 3.1 Consensus size: 20
37917 AAATAGAAGA
37927 TTTTATCTCGCTTGAGATAG
1 TTTTATCTCGCTTGAGATAG
* ***
37947 TTTT-CCTCGAAAGAGAATA-
1 TTTTATCTCGCTTGAG-ATAG
*
37966 TTTTATATCGCTTGAGATAG
1 TTTTATCTCGCTTGAGATAG
37986 TTT
1 TTT
37989 CTCTCGAAAC
Statistics
Matches: 30, Mismatches: 9, Indels: 6
0.67 0.20 0.13
Matches are distributed among these distances:
19 14 0.47
20 16 0.53
ACGTcount: A:0.26, C:0.13, G:0.18, T:0.44
Consensus pattern (20 bp):
TTTTATCTCGCTTGAGATAG
Found at i:41764 original size:22 final size:21
Alignment explanation
Indices: 41722--41761 Score: 55
Period size: 21 Copynumber: 1.9 Consensus size: 21
41712 GAGTTTATTT
*
41722 TCATTTTTCAATTTTGAAACA
1 TCATTTTTCAATTTTAAAACA
41743 TCATTTTT-ATATTTTAAAA
1 TCATTTTTCA-ATTTTAAAA
41762 ACAATTTCTC
Statistics
Matches: 17, Mismatches: 1, Indels: 2
0.85 0.05 0.10
Matches are distributed among these distances:
20 1 0.06
21 16 0.94
ACGTcount: A:0.35, C:0.10, G:0.03, T:0.53
Consensus pattern (21 bp):
TCATTTTTCAATTTTAAAACA
Found at i:42742 original size:39 final size:39
Alignment explanation
Indices: 42696--45785 Score: 3832
Period size: 39 Copynumber: 79.7 Consensus size: 39
42686 TCGGTTGTAC
** * *
42696 AAGATTTTATCTCTATTGAGATAGTTTCTCTCGAAAAAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * *
42735 AATATTTTATCTCACTTGAGATAGTTTCCCTCGAAACAC
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* **
42774 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCCAATTAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
*
42813 AAGATTTTGTCTCGCTTGAGATAGTTTCCCTCGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* *
42852 AAGATTTTTTCTCGCTTGAGATAGTTTCCGTCGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * *
42891 AAGATTTTATCTCACTTGAGATCGTTTCCCACGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * *
42930 AATATTTTATCACGATTGAGATCGTTTCCCTCGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * *
42969 AAGATTTTGTCTCGCTTGATATAGTTTCCCTTGAAATAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * *
43008 AAGATTTTGTCTCGCTTGATATAGTTTCCCTTGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * *
43047 AAGATTTTTTCTCGCTTGAGATATTTTCCCTCGAAACAT
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * *
43086 AAGATTTTTTCTCGCTTGAGCTAGTTTCCTTCGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * *
43125 AAGATTTTATCTCGCTTGATATAGTTTCCCTTGAAATAA
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * **
43164 AATATTTTATCTCACTAAAGATAGTTTCCCTCGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * *
43203 AAGATTTTGTCTCGCTTGAGATAGTTTCCCTCAAAATAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * * *
43242 AAGATTTTGTTTCGCTTGAGATAGTTTCCATCAAAATAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* *
43281 AAGATTTTATCTCCCTTGAGATAGTTTCCCTTGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * *
43320 AATATTTTATCTCCCTTGAGATAGTTTCCCTCGAAACAA
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
43359 AAGATTTTATCTCGCTTGAGATAGTTTCCCAT-GAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCC-TCGAAACAG
* * * * * *
43398 AAGAATTTATCTAGCTTTAGCTAGTTTCCAT-GAAATAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* *
43436 AAGATTTTATCTCGCTTGAGATAGATTCCCACGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * ** *
43475 AAGATTTTATCTTGCTTGAGAAAGTTTCACTTAAAACAA
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* *
43514 AATATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACTG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* *
43553 AAGATTTTTTCTCGCTTGAGATAGTTTCCCTCGGAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * * * * **
43592 AATATTTTGTCTCTCTTGAGATAGTTCCCCTTGATATTG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * **
43631 AAGATTTTTTCTCGCTTGAGATACTTTCCCTCAAAATTG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * * * * *
43670 ATGATCTTATATCGCTTGACAGAGTTTCCCTTGAAATAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * *
43709 AGGATTTTATCTCTCTTGAGATAGTTTCCCTC-AAAAATT
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACA-G
* * * * * *
43748 ATGATTTTATATTGCTTGAGATAGTTTTCCTTGGAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
*
43787 AAGATTTTATCTCGCTTGAGACAGTTTCCCTCGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
*
43826 AATATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
43865 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * *
43904 AAGATTTTGTCTCGCTTGATATAGTTTCCCTCGAAACAA
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
*
43943 AAGATTTTATCTCGCTTGAGATAGTTTCCCACGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * *
43982 AATATTTTATCTCGCTTGAGATGGTTTCCCTTGAAACAT
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * *
44021 AATATTTTATCTCGATTGAGATGGTTTCCCTCGAAAGAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* *
44060 AAGATTTTGTCTCGCTTGAGATAGTTTCTCTCGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * *
44099 AAGATTTTTTCTCG-TTGAAATAGTTTCTCTCGAAACAA
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* **
44137 AAGATTTTGTCTCGCTTGAGATAGTTTCCAACGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
*
44176 AAGATTTTATCTCGCTTGAGATTGTTTCCCTCGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
*
44215 AAGATTTTGTCTCGCTTGAGATAGTTTCCCTCGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * *
44254 AAGATTTTGTCTAGAATT-AGATAGTTTCCCTCGAAACAA
1 AAGATTTTATCTCG-CTTGAGATAGTTTCCCTCGAAACAG
* *
44293 AAGATTTTGTCTCGCTTTAGATAGTTTCCCTCGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
*
44332 AAGATTTTTTCTC-CTTTGAGATAGTTTCCCTCGAAACAG
1 AAGATTTTATCTCGC-TTGAGATAGTTTCCCTCGAAACAG
* *
44371 AAGATTTTGTCTCGCTTGAGATTGTTTCCCTCGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* *
44410 AAGATTTTGTCTCGCTTGAGATAGTTTCCCTTGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* *
44449 AAGATTTTATCTCGTTTGAGATAGTTTCCCT-GAAATAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * *
44487 AATATTTTATCTCGCTTGAGA-AGTTTCCCT-GAAATAA
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* *
44524 AATATTTTATCTCGCTTGAGATAGTTTCCCTCGAAATAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * *
44563 AATATTTTGTCTCGCTTGAGATAGTTTCCTTCGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * *
44602 AAAATTTTATCTCGTTTGTGATAGTTTCCCT-GAAATAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * *
44640 AATATTTTATCTCGCTTGAGATAGTTTCCCTCCAAATAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
44679 AAGATTTTATCTCGCTTGAGATAGTTTCCCT-----C-G
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* *
44712 AA-ATTTTATCTCGCTTGAGATAGTTTCTCTCGAAATAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * * * *
44750 AAGATTTTGTTTCTCTTGCGATAGTTTCCCTCCAAATAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
*
44789 AAGATTTTATCTTGCTTGAGATAGTTTCCCTCG-AACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * *
44827 AAGATTTTGTCTCGCTTGAGATAGTTTCCGTCAAAACAA
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * *
44866 AAGATTTTATCTCGCTTAAGATCGTTTCCCTCGACACAT
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
*
44905 AAGATTTTATCTCTC-TGAGATAGTTTCCCTCGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * *
44943 AAGTTTTTATCTCGCTTGAGATAGTTTCCCTCGAAATAA
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* *
44982 AAGATTTTATCTTGCTTGAGATAGTTTCCCACGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * * *
45021 AATATTTTATCTCGCTTGAGATGGTTTCCGTTGAAATAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * * *
45060 AATATTTTATCTCGTTTGAGATGGTTTCTCTCGAAACAT
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * *
45099 AATATTTTGTCTCGCTTGAGATAGTTTCCCTCGAAATAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* *
45138 AAGATTTTTTCTCGCTTGAGATAGTTTCCCTCGAAACAA
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * *
45177 AAGATTTTGTCTCGCTTGAGATAGTTTCCTTCAAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* *
45216 AAGATTTTGTCTCGCTTGAGATAGTTTCCCTCAAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * *
45255 AAGATTTTTTCTCGCTTGAGATTGTTTCCCTCGAAACAT
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * *
45294 AAGATTTTTTCTCGCTTGAGATAGTTTCCTTCAAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
*
45333 AAGATTTTATCTCGCTTGAGATAGTTTCCCT-GAAATAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* *
45371 AATATTTTATCTCGCTTGAGATAGTTTCCGTCGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * *
45410 AAGATTTTTTCTCGCTTGAGATAGTTTCCCTCGAAATAA
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
*
45449 AAGATTTTGTCTCGCTTGAGATAGTTTCCCT-GAAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCG-AAACAG
* * * *
45488 AAGTTTTTTTCTCGCTTGAGATCGTTTCCCTCGAAACAT
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * *
45527 AAGATTTTTTCTCGCTTGAGATAGTTTCCTTCAAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* *
45566 AAGATTTTATCTCGCTTGAGATAGTTT-CCTTGAAATAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
** *
45604 AATTTTTTATCTCGCTTGAGATAGTTTCTCTCGAAACAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * * *
45643 AAGATTTTGTGTCTCTTGAGATAGTTTCCCTCCAAATAG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * *
45682 AAGATTTTGTCTCGCTTGAGATAGTTTTCCTTGAAACGG
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* * * *
45721 AACATTTTGTCTCGCTTGAGATAGTTTCACTCGAAACAA
1 AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
* *
45760 AAGATTTT-TCTCACTTGAGATTGTTT
1 AAGATTTTATCTCGCTTGAGATAGTTT
45786 TTGTTAAAAC
Statistics
Matches: 2648, Mismatches: 378, Indels: 51
0.86 0.12 0.02
Matches are distributed among these distances:
32 27 0.01
33 3 0.00
37 36 0.01
38 292 0.11
39 2282 0.86
40 8 0.00
ACGTcount: A:0.28, C:0.18, G:0.17, T:0.37
Consensus pattern (39 bp):
AAGATTTTATCTCGCTTGAGATAGTTTCCCTCGAAACAG
Found at i:44723 original size:32 final size:32
Alignment explanation
Indices: 44682--44747 Score: 123
Period size: 32 Copynumber: 2.1 Consensus size: 32
44672 CAAATAGAAG
44682 ATTTTATCTCGCTTGAGATAGTTTCCCTCGAA
1 ATTTTATCTCGCTTGAGATAGTTTCCCTCGAA
*
44714 ATTTTATCTCGCTTGAGATAGTTTCTCTCGAA
1 ATTTTATCTCGCTTGAGATAGTTTCCCTCGAA
44746 AT
1 AT
44748 AGAAGATTTT
Statistics
Matches: 33, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
32 33 1.00
ACGTcount: A:0.23, C:0.20, G:0.15, T:0.42
Consensus pattern (32 bp):
ATTTTATCTCGCTTGAGATAGTTTCCCTCGAA
Found at i:57959 original size:30 final size:29
Alignment explanation
Indices: 57906--57964 Score: 91
Period size: 30 Copynumber: 2.0 Consensus size: 29
57896 AGTTCGAATA
**
57906 GAACAGTGCAGAAAAAATTGATTTGGTTC
1 GAACAGTGCAGAAAAAACAGATTTGGTTC
57935 GAACAGTGCAGAAAAAAACAGATTTGGTTC
1 GAACAGTGCAG-AAAAAACAGATTTGGTTC
57965 AAACTTTACT
Statistics
Matches: 27, Mismatches: 2, Indels: 1
0.90 0.07 0.03
Matches are distributed among these distances:
29 11 0.41
30 16 0.59
ACGTcount: A:0.41, C:0.12, G:0.24, T:0.24
Consensus pattern (29 bp):
GAACAGTGCAGAAAAAACAGATTTGGTTC
Found at i:58819 original size:19 final size:19
Alignment explanation
Indices: 58797--58839 Score: 52
Period size: 19 Copynumber: 2.3 Consensus size: 19
58787 ATCTTGTATC
58797 ATTC-TTGTTCCACAAAAAA
1 ATTCATTGTTCC-CAAAAAA
* *
58816 ATTCATTGTTTCGAAAAAA
1 ATTCATTGTTCCCAAAAAA
58835 ATTCA
1 ATTCA
58840 AAAAAAACAA
Statistics
Matches: 21, Mismatches: 2, Indels: 2
0.84 0.08 0.08
Matches are distributed among these distances:
19 15 0.71
20 6 0.29
ACGTcount: A:0.42, C:0.16, G:0.07, T:0.35
Consensus pattern (19 bp):
ATTCATTGTTCCCAAAAAA
Found at i:61031 original size:75 final size:73
Alignment explanation
Indices: 60929--61143 Score: 277
Period size: 75 Copynumber: 2.9 Consensus size: 73
60919 ATTTTAAACA
* *
60929 TTATATTTTATATTTATTTTAGGTATTTTAGTTTAAATAGATTTTAGTATTTTAAGTAAGTTTTA
1 TTATA-TTTATATTTGTTTTAGGTATTTTAGTTTAAATAG-TTTTAGTATTTTAAGTAAGATTTA
*
60994 GGATATTATTT
64 GAATATTA-TT
* * *
61005 TTATATTTATCTTTGTTTTAGGTATTTTAGTTTAAATAGGTTTTAGTATTTTAATTAGGATTTAG
1 TTATATTTATATTTGTTTTAGGTATTTTAGTTTAAATA-GTTTTAGTATTTTAAGTAAGATTTAG
61070 AATATTATT
65 AATATTATT
* * * * *
61079 TTAAATATTATTTTTGTTTTAGGTATTTTAGTTTAAATAGTTTTAAGTGTTTTAATTAGGATTTA
1 TTATAT-TTATATTTGTTTTAGGTATTTTAGTTTAAATAGTTTT-AGTATTTTAAGTAAGATTTA
61144 AGATGTTTTA
Statistics
Matches: 127, Mismatches: 9, Indels: 7
0.89 0.06 0.05
Matches are distributed among these distances:
74 12 0.09
75 109 0.86
76 6 0.05
ACGTcount: A:0.29, C:0.00, G:0.13, T:0.57
Consensus pattern (73 bp):
TTATATTTATATTTGTTTTAGGTATTTTAGTTTAAATAGTTTTAGTATTTTAAGTAAGATTTAGA
ATATTATT
Found at i:61798 original size:18 final size:18
Alignment explanation
Indices: 61759--61801 Score: 52
Period size: 18 Copynumber: 2.4 Consensus size: 18
61749 CTTTAATTTG
*
61759 TTTATTTAATTATTTTTC
1 TTTATTTAATTATTTCTC
*
61777 TTTATTTAATTCTTATCT-
1 TTTATTTAATTATT-TCTC
61795 TTTATTT
1 TTTATTT
61802 TAAAAAATAA
Statistics
Matches: 22, Mismatches: 2, Indels: 2
0.85 0.08 0.08
Matches are distributed among these distances:
18 20 0.91
19 2 0.09
ACGTcount: A:0.21, C:0.07, G:0.00, T:0.72
Consensus pattern (18 bp):
TTTATTTAATTATTTCTC
Found at i:61856 original size:7 final size:7
Alignment explanation
Indices: 61844--61901 Score: 50
Period size: 7 Copynumber: 8.1 Consensus size: 7
61834 TCTTTACTAC
61844 TATTATT
1 TATTATT
61851 TATTATTT
1 TATTA-TT
61859 TATTATT
1 TATTATT
*
61866 T-TCCATT
1 TAT-TATT
61873 T-TTATT
1 TATTATT
61879 TATTA-T
1 TATTATT
61885 TATTTATTT
1 TA-TTA-TT
61894 TATTATT
1 TATTATT
61901 T
1 T
61902 TTTCTTTTTA
Statistics
Matches: 43, Mismatches: 2, Indels: 12
0.75 0.04 0.21
Matches are distributed among these distances:
6 8 0.19
7 22 0.51
8 10 0.23
9 3 0.07
ACGTcount: A:0.24, C:0.03, G:0.00, T:0.72
Consensus pattern (7 bp):
TATTATT
Found at i:61862 original size:15 final size:14
Alignment explanation
Indices: 61846--61904 Score: 59
Period size: 15 Copynumber: 4.1 Consensus size: 14
61836 TTTACTACTA
61846 TTATTTATTATTTT
1 TTATTTATTATTTT
*
61860 ATTATTT-TCCA-TTT
1 -TTATTTAT-TATTTT
*
61874 TTATTTATTATTAT
1 TTATTTATTATTTT
61888 TTATTTTATTATTTT
1 TTA-TTTATTATTTT
61903 TT
1 TT
61905 CTTTTTAAAT
Statistics
Matches: 36, Mismatches: 4, Indels: 8
0.75 0.08 0.17
Matches are distributed among these distances:
13 7 0.19
14 10 0.28
15 19 0.53
ACGTcount: A:0.22, C:0.03, G:0.00, T:0.75
Consensus pattern (14 bp):
TTATTTATTATTTT
Found at i:61900 original size:38 final size:36
Alignment explanation
Indices: 61844--61946 Score: 106
Period size: 35 Copynumber: 2.8 Consensus size: 36
61834 TCTTTACTAC
*
61844 TATTATTTATTATT-TTATTATTTTCCATTTTT-ATTTA
1 TATTATTTATT-TTATTATTATTTT-C-TTTTTAAATTA
61881 TTATTATTTATTTTATTATT-TTTTCTTTTTAAATTA
1 -TATTATTTATTTTATTATTATTTTCTTTTTAAATTA
*
61917 AATTATTTATTTTATT-TTATTATATCTTTT
1 TATTATTTATTTTATTATTATT-T-TCTTTT
61947 CAACTTCATC
Statistics
Matches: 58, Mismatches: 2, Indels: 11
0.82 0.03 0.15
Matches are distributed among these distances:
34 2 0.03
35 22 0.38
36 6 0.10
37 12 0.21
38 16 0.28
ACGTcount: A:0.25, C:0.04, G:0.00, T:0.71
Consensus pattern (36 bp):
TATTATTTATTTTATTATTATTTTCTTTTTAAATTA
Found at i:61909 original size:15 final size:15
Alignment explanation
Indices: 61873--61937 Score: 53
Period size: 15 Copynumber: 4.1 Consensus size: 15
61863 ATTTTCCATT
61873 TTTA-TTTATTATTA
1 TTTATTTTATTATTA
*
61887 TTTATTTTATTATTT
1 TTTATTTTATTATTA
*
61902 TTTCTTTTTAAATTAAATTA
1 TTT-ATTTT--ATT--ATTA
61922 TTTATTTTATT-TTA
1 TTTATTTTATTATTA
61936 TT
1 TT
61938 ATATCTTTTC
Statistics
Matches: 41, Mismatches: 4, Indels: 12
0.72 0.07 0.21
Matches are distributed among these distances:
14 9 0.22
15 12 0.29
16 4 0.10
17 3 0.07
18 3 0.07
19 4 0.10
20 6 0.15
ACGTcount: A:0.26, C:0.02, G:0.00, T:0.72
Consensus pattern (15 bp):
TTTATTTTATTATTA
Found at i:63463 original size:21 final size:20
Alignment explanation
Indices: 63439--63514 Score: 91
Period size: 20 Copynumber: 3.6 Consensus size: 20
63429 AAATGCCTGA
63439 GGGTATCGATACCTAAGTAGG
1 GGGTATCGATACCTAA-TAGG
63460 GGGTATCGATACC-ATATCATGG
1 GGGTATCGATACCTA-AT-A-GG
*
63482 GGGTATCGATACCTACTAGG
1 GGGTATCGATACCTAATAGG
*
63502 GGGTATCGGTACC
1 GGGTATCGATACC
63515 ATTGAGCATT
Statistics
Matches: 49, Mismatches: 2, Indels: 9
0.82 0.03 0.15
Matches are distributed among these distances:
20 16 0.33
21 16 0.33
22 16 0.33
23 1 0.02
ACGTcount: A:0.25, C:0.18, G:0.32, T:0.25
Consensus pattern (20 bp):
GGGTATCGATACCTAATAGG
Found at i:63486 original size:22 final size:21
Alignment explanation
Indices: 63439--63516 Score: 90
Period size: 21 Copynumber: 3.7 Consensus size: 21
63429 AAATGCCTGA
*
63439 GGGTATCGATACC-TAAGTAGG
1 GGGTATCGATACCAT-ACTAGG
63460 GGGTATCGATACCATA-TCATGG
1 GGGTATCGATACCATACT-A-GG
63482 GGGTATCGATACC-TACTAGG
1 GGGTATCGATACCATACTAGG
*
63502 GGGTATCGGTACCAT
1 GGGTATCGATACCAT
63517 TGAGCATTCT
Statistics
Matches: 51, Mismatches: 1, Indels: 10
0.82 0.02 0.16
Matches are distributed among these distances:
20 15 0.29
21 19 0.37
22 17 0.33
ACGTcount: A:0.26, C:0.18, G:0.31, T:0.26
Consensus pattern (21 bp):
GGGTATCGATACCATACTAGG
Found at i:63622 original size:75 final size:74
Alignment explanation
Indices: 63476--63666 Score: 278
Period size: 75 Copynumber: 2.6 Consensus size: 74
63466 CGATACCATA
* *
63476 TCATGGGGGTATCGATA-CCTACTAGGGGGTATCGGTACCATTGAGCATTCTGTTATTTCTCGGA
1 TCATAGGGGTATCGGTACCCTA-TAGGGGGTATCGGTACCATTGAGCATTCTGTTATTTCTCGGA
63540 ACAAAAATGT
65 ACAAAAATGT
63550 TCATAGGGGTATCGGTACCCTATAGGGGGTATCGGTACCATCAT-AGCATTCTGTTATTTCTCGG
1 TCATAGGGGTATCGGTACCCTATAGGGGGTATCGGTACCAT--TGAGCATTCTGTTATTTCTCGG
*
63614 AACCAAAATGT
64 AACAAAAATGT
* * *
63625 TCATAGGGGTATTGGTACCATATATGGGGGTATCGATACCAT
1 TCATAGGGGTATCGGTACCCTATA-GGGGGTATCGGTACCAT
63667 ACTAAATAAA
Statistics
Matches: 107, Mismatches: 6, Indels: 6
0.90 0.05 0.05
Matches are distributed among these distances:
74 34 0.32
75 56 0.52
76 17 0.16
ACGTcount: A:0.26, C:0.18, G:0.26, T:0.31
Consensus pattern (74 bp):
TCATAGGGGTATCGGTACCCTATAGGGGGTATCGGTACCATTGAGCATTCTGTTATTTCTCGGAA
CAAAAATGT
Found at i:65742 original size:23 final size:23
Alignment explanation
Indices: 65716--65791 Score: 95
Period size: 23 Copynumber: 3.4 Consensus size: 23
65706 CGATAGGGGA
65716 TATCGATA-CTCATTCAAAGAGGG
1 TATCGATACCT-ATTCAAAGAGGG
* *
65739 TATCTATACCTATTC-AA-TGGG
1 TATCGATACCTATTCAAAGAGGG
*
65760 TATCGATACCTATTCAAAGGGGG
1 TATCGATACCTATTCAAAGAGGG
65783 TATCGATAC
1 TATCGATAC
65792 TGTATCAGGG
Statistics
Matches: 46, Mismatches: 4, Indels: 6
0.82 0.07 0.11
Matches are distributed among these distances:
21 17 0.37
22 4 0.09
23 23 0.50
24 2 0.04
ACGTcount: A:0.32, C:0.18, G:0.20, T:0.30
Consensus pattern (23 bp):
TATCGATACCTATTCAAAGAGGG
Found at i:65762 original size:21 final size:21
Alignment explanation
Indices: 65736--65816 Score: 76
Period size: 21 Copynumber: 3.8 Consensus size: 21
65726 CATTCAAAGA
*
65736 GGGTATCTATACCTATTCAAT
1 GGGTATCGATACCTATTCAAT
*
65757 GGGTATCGATACCTATTCAAAGG
1 GGGTATCGATACCTATTC-AA-T
* *
65780 GGGTATCGATA-CTGTATC-AG
1 GGGTATCGATACCTAT-TCAAT
65800 GGGTATCGATACTCTAT
1 GGGTATCGATAC-CTAT
65817 GCACATAAAT
Statistics
Matches: 51, Mismatches: 4, Indels: 9
0.80 0.06 0.14
Matches are distributed among these distances:
20 12 0.24
21 18 0.35
22 8 0.16
23 13 0.25
ACGTcount: A:0.27, C:0.17, G:0.23, T:0.32
Consensus pattern (21 bp):
GGGTATCGATACCTATTCAAT
Found at i:65784 original size:44 final size:43
Alignment explanation
Indices: 65710--65816 Score: 119
Period size: 44 Copynumber: 2.4 Consensus size: 43
65700 TAAACCCGAT
*
65710 AGGGGATATCGATA-CTCATTCAAAGAGGGTATCTATACCTAT-TC
1 AGGGG-TATCGATACCT-ATTCAAAGAGGGTATCGATA-CTATATC
* * *
65754 AATGGGTATCGATACCTATTCAAAGGGGGTATCGATACTGTATC
1 -AGGGGTATCGATACCTATTCAAAGAGGGTATCGATACTATATC
65798 AGGGGTATCGATACTCTAT
1 AGGGGTATCGATAC-CTAT
65817 GCACATAAAT
Statistics
Matches: 54, Mismatches: 5, Indels: 7
0.82 0.08 0.11
Matches are distributed among these distances:
43 16 0.30
44 32 0.59
45 6 0.11
ACGTcount: A:0.30, C:0.17, G:0.23, T:0.30
Consensus pattern (43 bp):
AGGGGTATCGATACCTATTCAAAGAGGGTATCGATACTATATC
Found at i:71703 original size:54 final size:55
Alignment explanation
Indices: 71623--71747 Score: 243
Period size: 54 Copynumber: 2.3 Consensus size: 55
71613 TACCTACTAG
71623 GGGGTATCGGTACCATCCGAGCATTCTGTTATTTCTC-GAACCAAAATGTTCATA
1 GGGGTATCGGTACCATCCGAGCATTCTGTTATTTCTCGGAACCAAAATGTTCATA
71677 GGGGTATCGGTACCATCCGAGCATTCTGTTATTTCTCGGAACCAAAATGTTCATA
1 GGGGTATCGGTACCATCCGAGCATTCTGTTATTTCTCGGAACCAAAATGTTCATA
71732 GGGGTATCGGTACCAT
1 GGGGTATCGGTACCAT
71748 ATATGGGGGT
Statistics
Matches: 70, Mismatches: 0, Indels: 1
0.99 0.00 0.01
Matches are distributed among these distances:
54 37 0.53
55 33 0.47
ACGTcount: A:0.25, C:0.22, G:0.23, T:0.30
Consensus pattern (55 bp):
GGGGTATCGGTACCATCCGAGCATTCTGTTATTTCTCGGAACCAAAATGTTCATA
Found at i:76064 original size:19 final size:19
Alignment explanation
Indices: 76040--76077 Score: 58
Period size: 19 Copynumber: 2.0 Consensus size: 19
76030 TTAGGTATTT
*
76040 TATTTTAAATAGGTTTTAG
1 TATTTTAAATAAGTTTTAG
*
76059 TATTTTAATTAAGTTTTAG
1 TATTTTAAATAAGTTTTAG
76078 GATATTATTT
Statistics
Matches: 17, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
19 17 1.00
ACGTcount: A:0.32, C:0.00, G:0.13, T:0.55
Consensus pattern (19 bp):
TATTTTAAATAAGTTTTAG
Found at i:76115 original size:76 final size:77
Alignment explanation
Indices: 76012--76166 Score: 258
Period size: 76 Copynumber: 2.0 Consensus size: 77
76002 ATTTTAAACA
* *
76012 TTATATTTTATCTTTGTTTTAGGTATTTTATTTTAAATAGG-TTTTAGTATTTTAATTAAGTTTT
1 TTATATTTTATCTTTGTTTTAGGTATTTTAGTTTAAATAGGTTTTTAGTATTTTAATTAAGATTT
*
76076 AGGATATTATTT
66 AGAATATTATTT
* *
76088 TTATATTTTTTCTTTGTTTTAGGTATTTTAGTTTAAATAGGTTTTTAGTATTTTAATTAGGATTT
1 TTATATTTTATCTTTGTTTTAGGTATTTTAGTTTAAATAGGTTTTTAGTATTTTAATTAAGATTT
76153 AGAATATTATTT
66 AGAATATTATTT
76165 TT
1 TT
76167 GTTTTAGGTA
Statistics
Matches: 73, Mismatches: 5, Indels: 1
0.92 0.06 0.01
Matches are distributed among these distances:
76 39 0.53
77 34 0.47
ACGTcount: A:0.26, C:0.01, G:0.12, T:0.61
Consensus pattern (77 bp):
TTATATTTTATCTTTGTTTTAGGTATTTTAGTTTAAATAGGTTTTTAGTATTTTAATTAAGATTT
AGAATATTATTT
Found at i:76990 original size:36 final size:34
Alignment explanation
Indices: 76921--77000 Score: 115
Period size: 36 Copynumber: 2.3 Consensus size: 34
76911 CTACTATTTA
* *
76921 TTATTTTATTATTTTCCTTTTTATTTATTATTAT
1 TTATTTTATTATTTTCCTTTTTAATTATAATTAT
*
76955 TTATTTTATTATTTTTTCTTTTTAAATTATAATTAT
1 TTATTTTATTA-TTTTCCTTTTT-AATTATAATTAT
76991 TTATTTTATT
1 TTATTTTATT
77001 TTATTATATC
Statistics
Matches: 41, Mismatches: 3, Indels: 2
0.89 0.07 0.04
Matches are distributed among these distances:
34 11 0.27
35 10 0.24
36 20 0.49
ACGTcount: A:0.24, C:0.04, G:0.00, T:0.72
Consensus pattern (34 bp):
TTATTTTATTATTTTCCTTTTTAATTATAATTAT
Found at i:78601 original size:17 final size:18
Alignment explanation
Indices: 78558--78622 Score: 57
Period size: 17 Copynumber: 3.8 Consensus size: 18
78548 CCTTCGAATA
*
78558 TATTTCTT-TCTTCTTCT
1 TATTTCTTCTCTTCTCCT
*
78575 TTTTTC-TCTCTTC-CCT
1 TATTTCTTCTCTTCTCCT
*
78591 TATTTCTTCTCCTCTCCT
1 TATTTCTTCTCTTCTCCT
* *
78609 T-TCTCTTTTCTTCT
1 TATTTCTTCTCTTCT
78623 TAAATTTGAT
Statistics
Matches: 38, Mismatches: 7, Indels: 6
0.75 0.14 0.12
Matches are distributed among these distances:
16 8 0.21
17 26 0.68
18 4 0.11
ACGTcount: A:0.03, C:0.32, G:0.00, T:0.65
Consensus pattern (18 bp):
TATTTCTTCTCTTCTCCT
Found at i:83423 original size:31 final size:33
Alignment explanation
Indices: 83388--83458 Score: 101
Period size: 33 Copynumber: 2.2 Consensus size: 33
83378 TGTTAAATAG
**
83388 ACAAGA-AG-GCGCTGAAGCTGTGTTCAATATA
1 ACAAGATAGAGCGCTGAAGCTGTACTCAATATA
*
83419 ACAAGATGGAGCGCTGAAGCTGTACTCAATATA
1 ACAAGATAGAGCGCTGAAGCTGTACTCAATATA
83452 ACAAGAT
1 ACAAGAT
83459 GGATTGAATG
Statistics
Matches: 35, Mismatches: 3, Indels: 2
0.88 0.08 0.05
Matches are distributed among these distances:
31 6 0.17
32 1 0.03
33 28 0.80
ACGTcount: A:0.38, C:0.17, G:0.24, T:0.21
Consensus pattern (33 bp):
ACAAGATAGAGCGCTGAAGCTGTACTCAATATA
Found at i:83434 original size:33 final size:33
Alignment explanation
Indices: 83396--83461 Score: 114
Period size: 33 Copynumber: 2.0 Consensus size: 33
83386 AGACAAGAAG
**
83396 GCGCTGAAGCTGTGTTCAATATAACAAGATGGA
1 GCGCTGAAGCTGTACTCAATATAACAAGATGGA
83429 GCGCTGAAGCTGTACTCAATATAACAAGATGGA
1 GCGCTGAAGCTGTACTCAATATAACAAGATGGA
83462 TTGAATGATT
Statistics
Matches: 31, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
33 31 1.00
ACGTcount: A:0.35, C:0.17, G:0.26, T:0.23
Consensus pattern (33 bp):
GCGCTGAAGCTGTACTCAATATAACAAGATGGA
Found at i:85538 original size:34 final size:34
Alignment explanation
Indices: 85447--85546 Score: 141
Period size: 34 Copynumber: 3.0 Consensus size: 34
85437 CCCATATGCA
* *
85447 AAGTTGGCCACCTACCAAAGAT-AAAATTTCCAAT
1 AAGTTGGCCACCAACC-AAGATGAAATTTTCCAAT
85481 AAGTTGGCCACCAACCAAGATGAAATTTTCCAAT
1 AAGTTGGCCACCAACCAAGATGAAATTTTCCAAT
* *
85515 AAGTTGGCTACCAACCAATATG-AATTTTCCAA
1 AAGTTGGCCACCAACCAAGATGAAATTTTCCAA
85547 CTTGCCAAAC
Statistics
Matches: 61, Mismatches: 4, Indels: 3
0.90 0.06 0.04
Matches are distributed among these distances:
33 15 0.25
34 46 0.75
ACGTcount: A:0.39, C:0.23, G:0.13, T:0.25
Consensus pattern (34 bp):
AAGTTGGCCACCAACCAAGATGAAATTTTCCAAT
Found at i:90177 original size:33 final size:33
Alignment explanation
Indices: 90108--90205 Score: 146
Period size: 33 Copynumber: 3.0 Consensus size: 33
90098 CCCATATGCA
*
90108 AAGTTGGCCACCTACCAAAGAT-AAATTTTCCAAT
1 AAGTTGGCCACCAACC-AAGATGAAATTTTCC-AT
90142 AAGTTGGCCACCAACCAAGATGAAATTTTCCAT
1 AAGTTGGCCACCAACCAAGATGAAATTTTCCAT
*
90175 AAGTTGACCACCAACCAAGATG-AATTTTCCA
1 AAGTTGGCCACCAACCAAGATGAAATTTTCCA
90206 ACTTGCCAAA
Statistics
Matches: 61, Mismatches: 2, Indels: 4
0.91 0.03 0.06
Matches are distributed among these distances:
32 9 0.15
33 28 0.46
34 24 0.39
ACGTcount: A:0.38, C:0.24, G:0.13, T:0.24
Consensus pattern (33 bp):
AAGTTGGCCACCAACCAAGATGAAATTTTCCAT
Found at i:91343 original size:14 final size:14
Alignment explanation
Indices: 91324--91390 Score: 107
Period size: 14 Copynumber: 4.6 Consensus size: 14
91314 AAAAGAGGAA
91324 GAAGAAAGTAAAAG
1 GAAGAAAGTAAAAG
91338 GAAGAAAGTAAAAGG
1 GAAGAAAGTAAAA-G
91353 AAGAAGAAAGTAAAAG
1 --GAAGAAAGTAAAAG
91369 GAAGAAAGTAAAAG
1 GAAGAAAGTAAAAG
91383 GAAGAAAG
1 GAAGAAAG
91391 GAGTTATATC
Statistics
Matches: 50, Mismatches: 0, Indels: 6
0.89 0.00 0.11
Matches are distributed among these distances:
14 35 0.70
15 1 0.02
16 1 0.02
17 13 0.26
ACGTcount: A:0.64, C:0.00, G:0.30, T:0.06
Consensus pattern (14 bp):
GAAGAAAGTAAAAG
Found at i:91357 original size:31 final size:31
Alignment explanation
Indices: 91319--91388 Score: 140
Period size: 31 Copynumber: 2.3 Consensus size: 31
91309 CGGTTAAAAG
91319 AGGAAGAAGAAAGTAAAAGGAAGAAAGTAAA
1 AGGAAGAAGAAAGTAAAAGGAAGAAAGTAAA
91350 AGGAAGAAGAAAGTAAAAGGAAGAAAGTAAA
1 AGGAAGAAGAAAGTAAAAGGAAGAAAGTAAA
91381 AGGAAGAA
1 AGGAAGAA
91389 AGGAGTTATA
Statistics
Matches: 39, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
31 39 1.00
ACGTcount: A:0.64, C:0.00, G:0.30, T:0.06
Consensus pattern (31 bp):
AGGAAGAAGAAAGTAAAAGGAAGAAAGTAAA
Found at i:93573 original size:16 final size:16
Alignment explanation
Indices: 93548--93585 Score: 58
Period size: 16 Copynumber: 2.4 Consensus size: 16
93538 GAGAATCTTA
93548 CGCCGCCGTATTCCAC
1 CGCCGCCGTATTCCAC
* *
93564 CGCCGTCGTATTCCGC
1 CGCCGCCGTATTCCAC
93580 CGCCGC
1 CGCCGC
93586 TGGCCACCAC
Statistics
Matches: 19, Mismatches: 3, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
16 19 1.00
ACGTcount: A:0.08, C:0.50, G:0.24, T:0.18
Consensus pattern (16 bp):
CGCCGCCGTATTCCAC
Found at i:94347 original size:2 final size:2
Alignment explanation
Indices: 94340--94370 Score: 62
Period size: 2 Copynumber: 15.5 Consensus size: 2
94330 ATAAATAATA
94340 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
94371 ATTTAAAAAA
Statistics
Matches: 29, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 29 1.00
ACGTcount: A:0.52, C:0.00, G:0.00, T:0.48
Consensus pattern (2 bp):
AT
Found at i:94670 original size:19 final size:22
Alignment explanation
Indices: 94623--94670 Score: 57
Period size: 22 Copynumber: 2.3 Consensus size: 22
94613 TTCTGTGAAG
94623 GCTGAATGACTTCATTACTCTT
1 GCTGAATGACTTCATTACTCTT
*
94645 TCATGAATG-CTTCA-TACT-TT
1 GC-TGAATGACTTCATTACTCTT
94665 GCTGAA
1 GCTGAA
94671 AAATCTATTC
Statistics
Matches: 23, Mismatches: 2, Indels: 5
0.77 0.07 0.17
Matches are distributed among these distances:
19 4 0.17
20 3 0.13
21 4 0.17
22 6 0.26
23 6 0.26
ACGTcount: A:0.25, C:0.21, G:0.15, T:0.40
Consensus pattern (22 bp):
GCTGAATGACTTCATTACTCTT
Found at i:95668 original size:22 final size:22
Alignment explanation
Indices: 95640--95692 Score: 88
Period size: 22 Copynumber: 2.4 Consensus size: 22
95630 GATAAAGCTT
*
95640 TCATCTTTGAAAAGAGAATCTA
1 TCATCTTTGAAAAGAGAATATA
95662 TCATCTTTGAAAAGAGAATATA
1 TCATCTTTGAAAAGAGAATATA
*
95684 TTATCTTTG
1 TCATCTTTG
95693 CAACATGTAG
Statistics
Matches: 29, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
22 29 1.00
ACGTcount: A:0.38, C:0.11, G:0.13, T:0.38
Consensus pattern (22 bp):
TCATCTTTGAAAAGAGAATATA
Found at i:103418 original size:3 final size:3
Alignment explanation
Indices: 103410--103467 Score: 82
Period size: 3 Copynumber: 18.7 Consensus size: 3
103400 CCTCCATTTG
103410 TAA TAA TAAA TAA T-A TATA TATA TAA TAA TAA TAA TAA TAA TAA TAA
1 TAA TAA T-AA TAA TAA TA-A TA-A TAA TAA TAA TAA TAA TAA TAA TAA
103457 TAA TAA TAA TA
1 TAA TAA TAA TA
103468 TTTAAAATAA
Statistics
Matches: 52, Mismatches: 0, Indels: 6
0.90 0.00 0.10
Matches are distributed among these distances:
2 2 0.04
3 40 0.77
4 10 0.19
ACGTcount: A:0.64, C:0.00, G:0.00, T:0.36
Consensus pattern (3 bp):
TAA
Found at i:119298 original size:18 final size:18
Alignment explanation
Indices: 119275--119328 Score: 53
Period size: 18 Copynumber: 3.2 Consensus size: 18
119265 TCGATATTAA
119275 AATAAATAAATAAATATT
1 AATAAATAAATAAATATT
119293 AATAAA-AAA-AAAT-TT
1 AATAAATAAATAAATATT
* *
119308 AA-AAATAGATTAATATAT
1 AATAAATAAATAAATAT-T
119326 AAT
1 AAT
119329 TTATAAAAAT
Statistics
Matches: 29, Mismatches: 2, Indels: 9
0.73 0.05 0.22
Matches are distributed among these distances:
14 3 0.10
15 6 0.21
16 7 0.24
17 4 0.14
18 9 0.31
ACGTcount: A:0.67, C:0.00, G:0.02, T:0.31
Consensus pattern (18 bp):
AATAAATAAATAAATATT
Found at i:119305 original size:20 final size:20
Alignment explanation
Indices: 119268--119305 Score: 51
Period size: 20 Copynumber: 1.9 Consensus size: 20
119258 CTTTTCTTCG
*
119268 ATATTAAAATAAATAAATAA
1 ATATTAAAATAAAAAAATAA
119288 ATATTAATAA-AAAAAAAT
1 ATATTAA-AATAAAAAAAT
119306 TTAAAAATAG
Statistics
Matches: 16, Mismatches: 1, Indels: 2
0.84 0.05 0.11
Matches are distributed among these distances:
20 14 0.88
21 2 0.12
ACGTcount: A:0.71, C:0.00, G:0.00, T:0.29
Consensus pattern (20 bp):
ATATTAAAATAAAAAAATAA
Found at i:119533 original size:31 final size:35
Alignment explanation
Indices: 119478--119549 Score: 89
Period size: 31 Copynumber: 2.2 Consensus size: 35
119468 TAATTCCATA
* * *
119478 AAATAAATATTATTTATATATATATTTATAATACT
1 AAATAAATATTATTTATATATATATATAAAATAAT
119513 AAATAAATATTA-TT-T-T-TATATATAAAATAAT
1 AAATAAATATTATTTATATATATATATAAAATAAT
119544 AAATAA
1 AAATAA
119550 TAATAGTAAT
Statistics
Matches: 34, Mismatches: 3, Indels: 4
0.83 0.07 0.10
Matches are distributed among these distances:
31 18 0.53
32 1 0.03
33 1 0.03
34 2 0.06
35 12 0.35
ACGTcount: A:0.54, C:0.01, G:0.00, T:0.44
Consensus pattern (35 bp):
AAATAAATATTATTTATATATATATATAAAATAAT
Found at i:121098 original size:18 final size:18
Alignment explanation
Indices: 121069--121118 Score: 64
Period size: 18 Copynumber: 2.7 Consensus size: 18
121059 ATTTACAAAA
*
121069 TAAAAGAATAAATTGAATT
1 TAAAA-AATAAATTGAATC
*
121088 TCAAAAATAAATTGAATC
1 TAAAAAATAAATTGAATC
*
121106 TAAAAAATGAATT
1 TAAAAAATAAATT
121119 TAGAGAAAAT
Statistics
Matches: 27, Mismatches: 4, Indels: 1
0.84 0.12 0.03
Matches are distributed among these distances:
18 23 0.85
19 4 0.15
ACGTcount: A:0.58, C:0.04, G:0.08, T:0.30
Consensus pattern (18 bp):
TAAAAAATAAATTGAATC
Found at i:121493 original size:8 final size:8
Alignment explanation
Indices: 121480--121509 Score: 53
Period size: 8 Copynumber: 3.9 Consensus size: 8
121470 TTTTTCAACA
121480 TTTTTTTC
1 TTTTTTTC
121488 -TTTTTTC
1 TTTTTTTC
121495 TTTTTTTC
1 TTTTTTTC
121503 TTTTTTT
1 TTTTTTT
121510 TTTCTTCAAG
Statistics
Matches: 21, Mismatches: 0, Indels: 2
0.91 0.00 0.09
Matches are distributed among these distances:
7 7 0.33
8 14 0.67
ACGTcount: A:0.00, C:0.10, G:0.00, T:0.90
Consensus pattern (8 bp):
TTTTTTTC
Found at i:121498 original size:15 final size:14
Alignment explanation
Indices: 121480--121512 Score: 57
Period size: 15 Copynumber: 2.3 Consensus size: 14
121470 TTTTTCAACA
121480 TTTTTTTCTTTTTT
1 TTTTTTTCTTTTTT
121494 CTTTTTTTCTTTTTT
1 -TTTTTTTCTTTTTT
121509 TTTT
1 TTTT
121513 CTTCAAGCAT
Statistics
Matches: 18, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
14 4 0.22
15 14 0.78
ACGTcount: A:0.00, C:0.09, G:0.00, T:0.91
Consensus pattern (14 bp):
TTTTTTTCTTTTTT
Found at i:122619 original size:34 final size:32
Alignment explanation
Indices: 122566--122635 Score: 86
Period size: 34 Copynumber: 2.1 Consensus size: 32
122556 CCTTACAAAC
* *
122566 TCCCTAGTTTTTCCGGGCTAAACTAGAACCTT
1 TCCCTAGTTTTACCGGGCTAAACTAGAACATT
* *
122598 TCCCTAGCTTTTACACGGGCTAAGCTATAACATT
1 TCCCTAG-TTTTAC-CGGGCTAAACTAGAACATT
122632 TCCC
1 TCCC
122636 CTTTACAAAA
Statistics
Matches: 32, Mismatches: 4, Indels: 2
0.84 0.11 0.05
Matches are distributed among these distances:
32 7 0.22
33 5 0.16
34 20 0.62
ACGTcount: A:0.23, C:0.30, G:0.14, T:0.33
Consensus pattern (32 bp):
TCCCTAGTTTTACCGGGCTAAACTAGAACATT
Found at i:122944 original size:21 final size:21
Alignment explanation
Indices: 122918--122959 Score: 75
Period size: 21 Copynumber: 2.0 Consensus size: 21
122908 CCAGAATGGG
*
122918 GGGAATCGGTACCCCTTCATA
1 GGGAATCGATACCCCTTCATA
122939 GGGAATCGATACCCCTTCATA
1 GGGAATCGATACCCCTTCATA
122960 AAATTCAAAT
Statistics
Matches: 20, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
21 20 1.00
ACGTcount: A:0.26, C:0.29, G:0.21, T:0.24
Consensus pattern (21 bp):
GGGAATCGATACCCCTTCATA
Found at i:123140 original size:29 final size:31
Alignment explanation
Indices: 123108--123165 Score: 93
Period size: 30 Copynumber: 1.9 Consensus size: 31
123098 ATTTTGAATG
*
123108 AATTCAATT-AAGTCCAAATA-CATTTTGTA
1 AATTCAATTCAAGTCCAAAAACCATTTTGTA
123137 AATTCAATTCAAGTCCAAAAACCATTTTG
1 AATTCAATTCAAGTCCAAAAACCATTTTG
123166 CCTTAAATTG
Statistics
Matches: 26, Mismatches: 1, Indels: 2
0.90 0.03 0.07
Matches are distributed among these distances:
29 9 0.35
30 10 0.38
31 7 0.27
ACGTcount: A:0.41, C:0.17, G:0.07, T:0.34
Consensus pattern (31 bp):
AATTCAATTCAAGTCCAAAAACCATTTTGTA
Found at i:126006 original size:34 final size:32
Alignment explanation
Indices: 125953--126022 Score: 86
Period size: 34 Copynumber: 2.1 Consensus size: 32
125943 CCTTACAAAC
*
125953 TCCCTAGTTTTTCCGGGCTAAACTAGAACATT
1 TCCCTAGTTTTACCGGGCTAAACTAGAACATT
* * *
125985 TCCCTAGCTTTTACACGGGCTAAGCTATAACCTT
1 TCCCTAG-TTTTAC-CGGGCTAAACTAGAACATT
126019 TCCC
1 TCCC
126023 CTTTACAAAA
Statistics
Matches: 32, Mismatches: 4, Indels: 2
0.84 0.11 0.05
Matches are distributed among these distances:
32 7 0.22
33 5 0.16
34 20 0.62
ACGTcount: A:0.23, C:0.30, G:0.14, T:0.33
Consensus pattern (32 bp):
TCCCTAGTTTTACCGGGCTAAACTAGAACATT
Found at i:126331 original size:21 final size:21
Alignment explanation
Indices: 126305--126346 Score: 75
Period size: 21 Copynumber: 2.0 Consensus size: 21
126295 CCAGAATGGG
*
126305 GGGAATCGGTACCCCTTCATA
1 GGGAATCGATACCCCTTCATA
126326 GGGAATCGATACCCCTTCATA
1 GGGAATCGATACCCCTTCATA
126347 AAATTCAAAT
Statistics
Matches: 20, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
21 20 1.00
ACGTcount: A:0.26, C:0.29, G:0.21, T:0.24
Consensus pattern (21 bp):
GGGAATCGATACCCCTTCATA
Found at i:133134 original size:15 final size:15
Alignment explanation
Indices: 133111--133142 Score: 55
Period size: 15 Copynumber: 2.1 Consensus size: 15
133101 TGCAATGAAT
133111 AATGAATGTATGCAA
1 AATGAATGTATGCAA
*
133126 AATGCATGTATGCAA
1 AATGAATGTATGCAA
133141 AA
1 AA
133143 GGTATTGATC
Statistics
Matches: 16, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
15 16 1.00
ACGTcount: A:0.47, C:0.09, G:0.19, T:0.25
Consensus pattern (15 bp):
AATGAATGTATGCAA
Found at i:137108 original size:24 final size:24
Alignment explanation
Indices: 137070--137129 Score: 68
Period size: 24 Copynumber: 2.5 Consensus size: 24
137060 TTCTTCGATA
* *
137070 TTAAAAAAAATATTAATA-AAACAT
1 TTAAAAAATAGATTAATATAAA-AT
*
137094 TTAAAAAATAGATTAATATATAAT
1 TTAAAAAATAGATTAATATAAAAT
137118 TTATAAAAATAG
1 TTA-AAAAATAG
137130 GATATGTATT
Statistics
Matches: 31, Mismatches: 3, Indels: 3
0.84 0.08 0.08
Matches are distributed among these distances:
24 21 0.68
25 10 0.32
ACGTcount: A:0.62, C:0.02, G:0.03, T:0.33
Consensus pattern (24 bp):
TTAAAAAATAGATTAATATAAAAT
Found at i:138786 original size:3 final size:3
Alignment explanation
Indices: 138774--138829 Score: 71
Period size: 3 Copynumber: 18.7 Consensus size: 3
138764 TAATATTTAT
*
138774 TAA TAA -AA TAA TAA TAA TAG TAA TAA TAA TAA TAA TAA TATA TAA
1 TAA TAA TAA TAA TAA TAA TAA TAA TAA TAA TAA TAA TAA TA-A TAA
138819 T-A TAAA TAA TA
1 TAA T-AA TAA TA
138830 TTCAAATGAA
Statistics
Matches: 47, Mismatches: 2, Indels: 8
0.82 0.04 0.14
Matches are distributed among these distances:
2 4 0.09
3 38 0.81
4 5 0.11
ACGTcount: A:0.64, C:0.00, G:0.02, T:0.34
Consensus pattern (3 bp):
TAA
Found at i:151266 original size:15 final size:16
Alignment explanation
Indices: 151239--151268 Score: 53
Period size: 15 Copynumber: 1.9 Consensus size: 16
151229 CCTCTTCTCA
151239 TAATATACTTTTTTTG
1 TAATATACTTTTTTTG
151255 TAATAT-CTTTTTTT
1 TAATATACTTTTTTT
151269 TATAACATCT
Statistics
Matches: 14, Mismatches: 0, Indels: 1
0.93 0.00 0.07
Matches are distributed among these distances:
15 8 0.57
16 6 0.43
ACGTcount: A:0.23, C:0.07, G:0.03, T:0.67
Consensus pattern (16 bp):
TAATATACTTTTTTTG
Found at i:151269 original size:16 final size:17
Alignment explanation
Indices: 151246--151283 Score: 51
Period size: 16 Copynumber: 2.3 Consensus size: 17
151236 TCATAATATA
* *
151246 CTTTTTTTGTAATATCT
1 CTTTTTTTATAACATCT
151263 -TTTTTTTATAACATCT
1 CTTTTTTTATAACATCT
151279 CTTTT
1 CTTTT
151284 AACAACACAT
Statistics
Matches: 18, Mismatches: 2, Indels: 2
0.82 0.09 0.09
Matches are distributed among these distances:
16 14 0.78
17 4 0.22
ACGTcount: A:0.18, C:0.13, G:0.03, T:0.66
Consensus pattern (17 bp):
CTTTTTTTATAACATCT
Found at i:151536 original size:24 final size:24
Alignment explanation
Indices: 151500--151555 Score: 94
Period size: 24 Copynumber: 2.3 Consensus size: 24
151490 AACATGCTTG
151500 TTTATTGAGTTGTGTATAAGCTCA
1 TTTATTGAGTTGTGTATAAGCTCA
* *
151524 TTTATTGATTTGTTTATAAGCTCA
1 TTTATTGAGTTGTGTATAAGCTCA
151548 TTTATTGA
1 TTTATTGA
151556 ATCTTTTGTA
Statistics
Matches: 30, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
24 30 1.00
ACGTcount: A:0.25, C:0.07, G:0.16, T:0.52
Consensus pattern (24 bp):
TTTATTGAGTTGTGTATAAGCTCA
Found at i:155982 original size:18 final size:18
Alignment explanation
Indices: 155959--155993 Score: 52
Period size: 18 Copynumber: 1.9 Consensus size: 18
155949 GACCCGAACC
155959 AAAATAATATATTTATTA
1 AAAATAATATATTTATTA
* *
155977 AAAATATTATTTTTATT
1 AAAATAATATATTTATT
155994 CAATACAAAT
Statistics
Matches: 15, Mismatches: 2, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
18 15 1.00
ACGTcount: A:0.49, C:0.00, G:0.00, T:0.51
Consensus pattern (18 bp):
AAAATAATATATTTATTA
Found at i:156755 original size:63 final size:62
Alignment explanation
Indices: 156656--156778 Score: 176
Period size: 63 Copynumber: 2.0 Consensus size: 62
156646 CACCAACAGC
* *
156656 AACAAAAAGTGATTTACATTCGATAGAACCACTCAACAACCAAA-TCAGACATATCCTCAAAAT
1 AACAAAAAGTGATTGACATTCGATAGAACCACTCAACAACCAAACCCA-ACATATCC-CAAAAT
* * *
156719 AACAAAAAGTGGTTGATATTCGATAGAACCAGTCAACAACCAAACCCAACATATCCCAAA
1 AACAAAAAGTGATTGACATTCGATAGAACCACTCAACAACCAAACCCAACATATCCCAAA
156779 TAGAAAAAAC
Statistics
Matches: 54, Mismatches: 5, Indels: 3
0.87 0.08 0.05
Matches are distributed among these distances:
62 4 0.07
63 48 0.89
64 2 0.04
ACGTcount: A:0.47, C:0.24, G:0.10, T:0.19
Consensus pattern (62 bp):
AACAAAAAGTGATTGACATTCGATAGAACCACTCAACAACCAAACCCAACATATCCCAAAAT
Found at i:161197 original size:4 final size:4
Alignment explanation
Indices: 161188--161248 Score: 68
Period size: 4 Copynumber: 15.2 Consensus size: 4
161178 CATATAAAAA
* * * * * *
161188 ATAC ATAC ATAT ATAT ATAC ATAT ATAC ATAT ATAC ATAT ATAT ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
161236 ATAC ATAC ATAC A
1 ATAC ATAC ATAC A
161249 CATTTTCATT
Statistics
Matches: 49, Mismatches: 8, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
4 49 1.00
ACGTcount: A:0.51, C:0.15, G:0.00, T:0.34
Consensus pattern (4 bp):
ATAC
Found at i:161201 original size:2 final size:2
Alignment explanation
Indices: 161196--161234 Score: 51
Period size: 2 Copynumber: 19.5 Consensus size: 2
161186 AAATACATAC
* * *
161196 AT AT AT AT AT AC AT AT AT AC AT AT AT AC AT AT AT AT AT A
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
161235 CATACATACA
Statistics
Matches: 31, Mismatches: 6, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
2 31 1.00
ACGTcount: A:0.51, C:0.08, G:0.00, T:0.41
Consensus pattern (2 bp):
AT
Found at i:161213 original size:8 final size:8
Alignment explanation
Indices: 161188--161248 Score: 77
Period size: 8 Copynumber: 7.6 Consensus size: 8
161178 CATATAAAAA
*
161188 ATACATAC
1 ATACATAT
*
161196 ATATATAT
1 ATACATAT
161204 ATACATAT
1 ATACATAT
161212 ATACATAT
1 ATACATAT
161220 ATACATAT
1 ATACATAT
* *
161228 ATATATAC
1 ATACATAT
*
161236 ATACATAC
1 ATACATAT
161244 ATACA
1 ATACA
161249 CATTTTCATT
Statistics
Matches: 47, Mismatches: 6, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
8 47 1.00
ACGTcount: A:0.51, C:0.15, G:0.00, T:0.34
Consensus pattern (8 bp):
ATACATAT
Found at i:161217 original size:20 final size:20
Alignment explanation
Indices: 161192--161248 Score: 87
Period size: 20 Copynumber: 2.9 Consensus size: 20
161182 TAAAAAATAC
*
161192 ATACATATATATATACATAT
1 ATACATATATACATACATAT
*
161212 ATACATATATACATATATAT
1 ATACATATATACATACATAT
*
161232 ATACATACATACATACA
1 ATACATATATACATACA
161249 CATTTTCATT
Statistics
Matches: 33, Mismatches: 4, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
20 33 1.00
ACGTcount: A:0.51, C:0.14, G:0.00, T:0.35
Consensus pattern (20 bp):
ATACATATATACATACATAT
Found at i:161633 original size:31 final size:30
Alignment explanation
Indices: 161583--161678 Score: 102
Period size: 31 Copynumber: 3.1 Consensus size: 30
161573 ATCCCAAAGG
* *
161583 ACCTATCCATATGTTCCGAATAACATAGGTA
1 ACCTGTCCATATGTCCCGAA-AACATAGGTA
* *
161614 ACCTGTCGATATGTCCCGAAGGACATAGGTA
1 ACCTGTCCATATGTCCCGAA-AACATAGGTA
* **
161645 AACTGTCCATATGTCTTGAAAGACATAGGTA
1 ACCTGTCCATATGTCCCGAAA-ACATAGGTA
161676 ACC
1 ACC
161679 CTCGACTCTT
Statistics
Matches: 53, Mismatches: 11, Indels: 2
0.80 0.17 0.03
Matches are distributed among these distances:
31 53 1.00
ACGTcount: A:0.33, C:0.22, G:0.19, T:0.26
Consensus pattern (30 bp):
ACCTGTCCATATGTCCCGAAAACATAGGTA
Found at i:163742 original size:2 final size:2
Alignment explanation
Indices: 163735--163774 Score: 80
Period size: 2 Copynumber: 20.0 Consensus size: 2
163725 GAACATATTC
163735 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
163775 GTATGTATAG
Statistics
Matches: 38, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 38 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Found at i:164319 original size:20 final size:20
Alignment explanation
Indices: 164296--164345 Score: 66
Period size: 21 Copynumber: 2.5 Consensus size: 20
164286 CTTACTCTTG
164296 GTATCGATAC-CTTCACATCA
1 GTATCGATACACTTCA-ATCA
164316 GTATCGATACTACTTCAATCA
1 GTATCGATAC-ACTTCAATCA
*
164337 ATATCGATA
1 GTATCGATA
164346 ATGTTCATCG
Statistics
Matches: 27, Mismatches: 1, Indels: 3
0.87 0.03 0.10
Matches are distributed among these distances:
20 10 0.37
21 12 0.44
22 5 0.19
ACGTcount: A:0.34, C:0.24, G:0.10, T:0.32
Consensus pattern (20 bp):
GTATCGATACACTTCAATCA
Found at i:167098 original size:16 final size:16
Alignment explanation
Indices: 167077--167110 Score: 68
Period size: 16 Copynumber: 2.1 Consensus size: 16
167067 CAGTTTTGGT
167077 CCCTTGGCTTCATGGA
1 CCCTTGGCTTCATGGA
167093 CCCTTGGCTTCATGGA
1 CCCTTGGCTTCATGGA
167109 CC
1 CC
167111 ATTTGTTGGA
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
16 18 1.00
ACGTcount: A:0.12, C:0.35, G:0.24, T:0.29
Consensus pattern (16 bp):
CCCTTGGCTTCATGGA
Found at i:174670 original size:20 final size:20
Alignment explanation
Indices: 174647--174696 Score: 66
Period size: 21 Copynumber: 2.5 Consensus size: 20
174637 CTTACTCTTG
174647 GTATCGATAC-CTTCACATCA
1 GTATCGATACACTTCA-ATCA
174667 GTATCGATACTACTTCAATCA
1 GTATCGATAC-ACTTCAATCA
*
174688 ATATCGATA
1 GTATCGATA
174697 ATGTTCATCG
Statistics
Matches: 27, Mismatches: 1, Indels: 3
0.87 0.03 0.10
Matches are distributed among these distances:
20 10 0.37
21 12 0.44
22 5 0.19
ACGTcount: A:0.34, C:0.24, G:0.10, T:0.32
Consensus pattern (20 bp):
GTATCGATACACTTCAATCA
Found at i:177443 original size:16 final size:16
Alignment explanation
Indices: 177422--177455 Score: 68
Period size: 16 Copynumber: 2.1 Consensus size: 16
177412 CAGTTTTGGT
177422 CCCTTGGCTTCATGGA
1 CCCTTGGCTTCATGGA
177438 CCCTTGGCTTCATGGA
1 CCCTTGGCTTCATGGA
177454 CC
1 CC
177456 ATTTGTTGGA
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
16 18 1.00
ACGTcount: A:0.12, C:0.35, G:0.24, T:0.29
Consensus pattern (16 bp):
CCCTTGGCTTCATGGA
Found at i:184179 original size:48 final size:47
Alignment explanation
Indices: 184108--184198 Score: 139
Period size: 48 Copynumber: 1.9 Consensus size: 47
184098 CTGCTCACAT
184108 AATTTGTACCGAAGTGCCACGTAGAATATGTCCCGAAGGACCGCGTAG
1 AATTTGTACCGAAGTGCCACGTAGAAT-TGTCCCGAAGGACCGCGTAG
* *
184156 AATTTGTCCCGAAG-GACCACGTAGAATTGTCCTGAAGGACCGC
1 AATTTGTACCGAAGTG-CCACGTAGAATTGTCCCGAAGGACCGC
184199 ATACCCTCAA
Statistics
Matches: 40, Mismatches: 2, Indels: 3
0.89 0.04 0.07
Matches are distributed among these distances:
47 16 0.40
48 24 0.60
ACGTcount: A:0.29, C:0.24, G:0.26, T:0.21
Consensus pattern (47 bp):
AATTTGTACCGAAGTGCCACGTAGAATTGTCCCGAAGGACCGCGTAG
Found at i:184192 original size:23 final size:23
Alignment explanation
Indices: 184111--184196 Score: 111
Period size: 24 Copynumber: 3.7 Consensus size: 23
184101 CTCACATAAT
*
184111 TTGTACCGAAGTG-CCACGTAGAA
1 TTGTCCCGAAG-GACCACGTAGAA
*
184134 TATGTCCCGAAGGACCGCGTAGAA
1 T-TGTCCCGAAGGACCACGTAGAA
184158 TTTGTCCCGAAGGACCACGTAGAA
1 -TTGTCCCGAAGGACCACGTAGAA
*
184182 TTGTCCTGAAGGACC
1 TTGTCCCGAAGGACC
184197 GCATACCCTC
Statistics
Matches: 56, Mismatches: 4, Indels: 6
0.85 0.06 0.09
Matches are distributed among these distances:
23 16 0.29
24 39 0.70
25 1 0.02
ACGTcount: A:0.28, C:0.24, G:0.27, T:0.21
Consensus pattern (23 bp):
TTGTCCCGAAGGACCACGTAGAA
Found at i:185134 original size:21 final size:21
Alignment explanation
Indices: 185108--185148 Score: 64
Period size: 21 Copynumber: 2.0 Consensus size: 21
185098 CCGTTAGACA
*
185108 GGGGGGAATCGGTACCCCCTG
1 GGGGGGAATAGGTACCCCCTG
*
185129 GGGGGGAATATGTACCCCCT
1 GGGGGGAATAGGTACCCCCT
185149 AGACAATCTA
Statistics
Matches: 18, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
21 18 1.00
ACGTcount: A:0.17, C:0.27, G:0.39, T:0.17
Consensus pattern (21 bp):
GGGGGGAATAGGTACCCCCTG
Found at i:198078 original size:2 final size:2
Alignment explanation
Indices: 198071--198109 Score: 78
Period size: 2 Copynumber: 19.5 Consensus size: 2
198061 TGATATCATC
198071 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
198110 ATTTTTTGAA
Statistics
Matches: 37, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 37 1.00
ACGTcount: A:0.51, C:0.00, G:0.00, T:0.49
Consensus pattern (2 bp):
AT
Found at i:198813 original size:12 final size:12
Alignment explanation
Indices: 198796--198820 Score: 50
Period size: 12 Copynumber: 2.1 Consensus size: 12
198786 GTTGCTTTCC
198796 TTTTTTTAATTT
1 TTTTTTTAATTT
198808 TTTTTTTAATTT
1 TTTTTTTAATTT
198820 T
1 T
198821 GAGAAACGAT
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 13 1.00
ACGTcount: A:0.16, C:0.00, G:0.00, T:0.84
Consensus pattern (12 bp):
TTTTTTTAATTT
Found at i:202972 original size:60 final size:60
Alignment explanation
Indices: 202896--203042 Score: 154
Period size: 60 Copynumber: 2.5 Consensus size: 60
202886 GGGGATTAAT
* * ** *
202896 TTAGAATAAG-GTTCATAGTTTGAGGATGAATTTTGAATGGTCGAAAAGTTCAAGGACC-AA
1 TTAGAATAAGAG-TCATAGTTTAAGGATGAAATTAAAATGGTC-AAAAGTTCAAGAACCAAA
* * * * *
202956 TTAGAATGAGAGTCATAGTTTAATGATGAAATTAAAATGTTCAAAAGTTTATGAACCAAA
1 TTAGAATAAGAGTCATAGTTTAAGGATGAAATTAAAATGGTCAAAAGTTCAAGAACCAAA
* *
203016 TTAGAATAAGAGTCATAATTTAGGGAT
1 TTAGAATAAGAGTCATAGTTTAAGGAT
203043 ATATATTGCA
Statistics
Matches: 71, Mismatches: 14, Indels: 4
0.80 0.16 0.04
Matches are distributed among these distances:
59 12 0.17
60 58 0.82
61 1 0.01
ACGTcount: A:0.41, C:0.07, G:0.21, T:0.31
Consensus pattern (60 bp):
TTAGAATAAGAGTCATAGTTTAAGGATGAAATTAAAATGGTCAAAAGTTCAAGAACCAAA
Found at i:208706 original size:3 final size:3
Alignment explanation
Indices: 208700--208796 Score: 178
Period size: 3 Copynumber: 32.7 Consensus size: 3
208690 TTCTTCTCGC
*
208700 TAT TAT TA- TAC TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT
1 TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT
208747 TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT
1 TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT
208795 TA
1 TA
208797 CTACTACTAC
Statistics
Matches: 92, Mismatches: 1, Indels: 2
0.97 0.01 0.02
Matches are distributed among these distances:
2 2 0.02
3 90 0.98
ACGTcount: A:0.34, C:0.01, G:0.00, T:0.65
Consensus pattern (3 bp):
TAT
Done.