Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009270.1 Hibiscus syriacus cultivar Beakdansim tig00112929_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41350

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35--70
13
2.8
13
95
4
65
11
25
50
13
1.75
11--65
21
2.7
20
75
8
56
16
23
43
16
1.87
2097--2145
23
2.1
24
92
3
82
46
14
16
22
1.82
2098--2171
24
3.2
23
83
7
78
41
17
16
24
1.89
2127--2198
24
3.0
24
83
4
83
40
20
15
23
1.91
4690--4724
12
2.8
13
87
12
56
8
25
48
17
1.75
6716--6788
24
3.0
24
80
6
85
43
16
16
23
1.87
6758--6817
24
2.5
24
89
5
95
40
21
15
23
1.91
12566--12726
65
2.5
65
83
5
184
32
22
18
26
1.97
17109--17133
12
2.1
12
100
0
50
40
24
24
12
1.88
18497--18576
24
3.5
24
69
20
73
22
25
22
30
1.99
24352--24383
11
2.9
11
95
0
55
50
3
0
46
1.17
24596--24630
17
2.1
17
88
0
52
34
0
2
62
1.10
30244--30271
2
14.0
2
100
0
56
50
0
0
50
1.00
33466--33506
2
21.0
2
95
5
75
51
0
0
48
1.00
33463--33503
19
2.2
19
100
0
82
53
0
0
46
1.00

Tables:   1

The End!