Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009272.1 Hibiscus syriacus cultivar Beakdansim tig00112945_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50070

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3013--3086
24
3.0
24
84
3
103
29
24
21
24
1.99
2985--3078
23
4.0
24
80
8
104
30
24
19
25
1.98
3013--3086
25
3.0
25
86
2
105
29
24
21
24
1.99
3212--3277
15
4.5
15
74
11
55
37
18
4
39
1.71
3225--3262
15
2.6
15
91
4
60
31
23
5
39
1.77
4878--4902
12
2.1
12
100
0
50
44
8
16
32
1.76
5536--5586
19
2.6
19
90
3
84
37
17
27
17
1.93
6086--6233
77
1.9
77
88
2
226
35
8
24
31
1.85
6173--6266
45
2.1
45
82
4
109
34
11
21
32
1.89
7743--7799
28
2.0
28
100
0
114
33
31
7
28
1.84
8783--8836
27
2.0
26
85
3
72
48
0
1
50
1.11
8782--8863
41
2.0
40
81
9
94
48
0
2
48
1.14
14571--14697
60
2.1
59
81
8
150
29
14
22
33
1.94
16467--16492
11
2.4
11
100
0
52
34
0
7
57
1.27
20512--20567
27
2.1
27
86
0
76
17
8
19
53
1.70
21315--21355
22
1.9
22
85
14
59
24
4
7
63
1.40
33174--33257
21
3.9
21
72
14
64
14
25
36
23
1.92
37052--37091
21
1.9
21
85
10
55
35
10
2
52
1.48

Tables:   1

The End!