Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009283.1 Hibiscus syriacus cultivar Beakdansim tig00112970_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  94935

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4448--4477
15
2.0
15
100
0
60
13
46
26
13
1.80
4901--4975
37
2.1
37
94
2
134
41
14
10
33
1.81
5987--6011
9
2.8
9
100
0
50
36
0
0
64
0.94
9925--10011
21
4.1
21
75
0
84
35
1
14
48
1.52
23745--23818
14
5.3
14
93
0
130
6
12
28
52
1.64
23745--23819
28
2.7
28
100
0
150
6
12
28
53
1.63
24687--24751
23
2.8
23
92
0
103
35
23
18
23
1.96
24981--25019
16
2.4
16
100
0
78
7
12
23
56
1.62
34430--34518
44
2.0
44
93
0
151
49
6
11
32
1.65
36207--36280
19
3.8
20
77
15
66
45
4
0
50
1.20
36174--36328
52
2.8
54
70
18
156
49
4
0
45
1.27
39265--39355
31
3.0
30
81
10
112
36
18
1
43
1.58
47653--47686
15
2.4
15
90
9
54
38
2
17
41
1.65
47554--47776
118
1.9
118
89
3
351
37
10
14
37
1.81
51202--51232
2
15.5
2
100
0
62
51
0
0
48
1.00
55651--55792
74
1.9
75
88
1
214
23
16
18
42
1.89
56632--56716
33
2.7
31
90
5
127
48
4
11
35
1.61
61377--61419
18
2.4
19
80
11
54
34
0
2
62
1.08
61487--61528
18
2.3
18
84
8
50
61
11
0
26
1.30
61624--61716
24
3.4
24
72
27
87
36
15
3
45
1.62
61626--61693
35
1.9
35
96
0
127
36
16
2
44
1.63
61675--61726
24
2.2
24
89
0
77
36
9
5
48
1.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69319--69402
10
7.8
10
70
15
60
26
25
40
8
1.83
69295--69413
33
3.6
33
94
1
193
26
27
37
8
1.85
69484--69580
10
9.1
10
70
12
68
10
36
28
24
1.88
69484--69563
33
2.4
33
89
0
115
10
36
27
26
1.88
69507--69578
20
3.5
20
80
10
81
9
33
31
25
1.88
69625--69697
29
2.5
30
86
4
103
13
24
38
23
1.91
70373--70406
17
2.0
17
88
0
50
70
0
5
23
1.09
75566--75680
60
1.9
60
84
7
153
35
18
5
40
1.73
79108--79151
21
2.1
21
86
0
61
50
15
6
27
1.70
81322--81363
16
2.6
16
100
0
84
54
9
23
11
1.66
87074--87107
14
2.5
14
95
4
61
35
0
5
58
1.22
88742--88766
13
1.9
13
100
0
50
0
40
0
60
0.97
90887--90959
18
3.9
18
82
7
101
19
20
31
28
1.97
90887--90961
38
2.0
38
91
0
123
20
20
30
29
1.97
91541--91566
12
2.2
12
100
0
52
50
7
34
7
1.60

Tables:   1

The End!