Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000929.1 Hibiscus syriacus cultivar Beakdansim tig00001854_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83582

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7184--7212
3
9.7
3
100
0
58
68
0
0
31
0.89
11150--11210
31
1.9
31
83
9
79
32
3
6
57
1.41
16247--16310
33
1.9
33
93
0
110
40
4
17
37
1.70
16432--16465
16
2.1
16
100
0
68
52
26
0
20
1.46
17283--17307
11
2.3
11
100
0
50
24
0
0
76
0.80
18022--18085
17
3.8
17
69
21
53
53
4
1
40
1.31
18022--18092
16
4.2
17
72
13
58
56
4
1
38
1.28
22535--22575
2
20.5
2
100
0
82
48
0
0
51
1.00
30493--30522
15
2.0
15
93
0
51
73
3
0
23
0.98
30868--30902
16
2.2
16
89
0
52
28
0
0
71
0.86
35513--35593
38
2.1
38
83
0
99
23
17
16
43
1.88
38646--38704
29
2.0
29
100
0
118
49
13
13
23
1.78
43339--43397
29
2.0
29
100
0
118
49
13
13
23
1.78
43625--43677
24
2.3
23
80
3
61
56
3
7
32
1.45
55150--55208
28
2.1
28
81
3
66
52
1
37
8
1.42
59831--60441
264
2.4
254
86
9
853
27
11
19
41
1.86
61236--61277
3
14.0
3
100
0
84
0
33
0
66
0.92
77089--77125
2
19.0
2
94
5
67
51
0
0
48
1.00

Tables:   1

The End!