Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009298.1 Hibiscus syriacus cultivar Beakdansim tig00113010_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52564

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
693--776
30
2.8
30
80
1
89
20
10
7
61
1.51
1033--1072
16
2.4
18
76
20
50
35
5
2
57
1.34
2053--2118
32
2.1
31
86
8
89
21
12
7
59
1.57
5119--5336
100
2.2
101
91
0
348
34
16
19
29
1.94
6299--6440
66
2.1
66
83
3
169
29
12
14
43
1.82
6457--6765
134
2.4
127
80
4
359
28
25
16
29
1.97
6972--7014
9
4.3
9
81
18
50
44
2
0
53
1.13
12553--12645
38
2.4
38
92
0
159
33
7
19
39
1.80
18912--18969
25
2.3
25
96
0
107
39
8
10
41
1.70
25545--25585
22
1.9
21
85
5
55
36
24
0
39
1.56
34378--34418
20
2.0
20
85
4
55
48
12
7
31
1.68
35284--35318
13
2.8
13
91
4
54
57
0
0
42
0.99
38305--38345
8
5.2
8
82
5
57
34
0
29
36
1.58
38413--39402
126
7.8
128
98
1
1881
22
25
19
32
1.97
38413--39400
507
1.9
505
97
1
1872
22
25
19
32
1.97
39787--39882
34
2.9
34
85
6
124
36
3
4
56
1.34
40398--40491
21
4.5
21
88
5
120
21
24
35
19
1.96
40495--40542
21
2.3
21
85
0
60
22
12
39
25
1.89
42260--42329
15
4.9
14
72
16
54
61
1
0
37
1.05
42267--42329
30
2.2
30
83
8
87
60
1
0
38
1.07
44756--44800
7
6.4
7
90
7
56
11
11
0
77
0.99
46343--46377
17
2.1
17
89
10
54
48
2
20
28
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47180--47215
3
12.0
3
100
0
72
66
0
0
33
0.92

Tables:   1

The End!