Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000093.1 Hibiscus syriacus cultivar Beakdansim tig00000172_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65190

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29670--29713
10
4.3
10
82
5
61
0
4
9
86
0.70
29670--29713
21
2.1
21
91
0
70
0
4
9
86
0.70
33104--33165
5
13.0
5
78
21
71
0
16
1
82
0.75
33093--33166
13
5.7
13
81
9
80
1
14
2
81
0.88
33104--33168
18
3.7
18
77
22
75
0
15
3
81
0.81
34109--34154
22
2.1
22
87
0
65
10
10
13
65
1.48
34804--34854
19
2.6
20
87
3
68
45
5
13
35
1.68
38473--38528
27
2.1
28
83
6
71
8
17
14
58
1.61
46418--46484
32
2.1
33
83
8
84
67
0
17
14
1.24
46649--46690
21
2.0
22
85
4
59
2
16
0
80
0.81
46649--46698
21
2.3
22
82
6
57
4
16
2
78
1.00
48282--48323
22
1.9
22
85
9
59
40
19
0
40
1.51
53317--53346
13
2.4
12
89
10
51
76
6
16
0
0.99
53308--53352
23
2.0
23
86
0
63
75
11
13
0
1.05
58971--59033
21
3.2
19
79
18
67
50
1
28
19
1.56
60210--60262
17
3.1
17
83
5
72
39
15
5
39
1.70
63939--63995
21
2.9
19
79
18
64
50
1
28
19
1.57
63950--63990
21
2.0
21
90
9
66
46
2
26
24
1.65

Tables:   1

The End!