Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009304.1 Hibiscus syriacus cultivar Beakdansim tig00113037_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  89271

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2083--2269
93
2.0
93
97
0
356
27
23
12
35
1.92
6310--6343
16
2.2
16
89
5
52
0
20
0
79
0.73
6332--6385
23
2.2
25
87
6
76
9
16
12
61
1.56
13648--13705
18
3.4
18
75
15
61
75
5
15
3
1.11
13660--13718
26
2.3
26
82
11
68
72
5
15
6
1.23
34108--34133
10
2.6
10
100
0
52
76
7
15
0
0.99
34094--34161
31
2.1
33
86
5
95
76
14
8
0
1.01
35103--35137
16
2.2
16
100
0
70
20
42
17
20
1.89
39139--39182
1
44.0
1
86
0
61
0
0
6
93
0.36
39139--39183
19
2.4
18
88
3
72
0
0
8
91
0.43
39139--39182
10
4.5
10
94
5
81
0
0
6
93
0.36
55179--55252
35
2.1
35
82
5
85
33
32
4
29
1.76
56102--56181
35
2.2
37
86
4
119
27
3
36
32
1.75
65231--65269
16
2.4
16
86
0
51
71
2
15
10
1.23
65474--65520
22
2.2
20
85
11
58
0
12
6
80
0.88
65899--65978
35
2.2
37
88
4
119
28
3
36
31
1.75
72122--72588
243
1.9
244
92
0
783
25
25
9
39
1.86
74279--74318
20
1.9
20
85
10
53
32
7
27
32
1.85

Tables:   1

The End!