Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009305.1 Hibiscus syriacus cultivar Beakdansim tig00113041_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62901

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
544--568
11
2.3
11
100
0
50
76
0
0
24
0.80
11243--11269
14
1.9
14
100
0
54
33
7
7
51
1.58
16437--16621
44
4.2
44
75
4
176
26
19
24
29
1.98
25408--25519
42
2.7
41
74
9
111
34
16
15
33
1.90
33563--33595
2
16.5
2
100
0
66
48
0
0
51
1.00
34805--34864
29
2.0
31
90
6
97
35
6
16
41
1.75
34928--34993
19
3.5
19
93
0
96
40
9
12
37
1.74
35100--35139
21
1.9
21
94
0
71
25
15
32
27
1.95
35170--35209
20
1.9
21
85
10
55
37
35
10
17
1.83
36353--36400
19
2.5
20
82
3
62
52
6
12
29
1.63
37651--37710
29
2.0
31
90
6
97
35
6
16
41
1.75
37774--37839
19
3.5
19
89
0
87
40
9
10
39
1.71
37946--37985
21
1.9
21
94
0
71
25
15
32
27
1.95
38016--38055
20
1.9
21
85
10
55
37
35
10
17
1.83
38709--38744
15
2.4
15
90
0
54
41
2
0
55
1.14
38804--38844
2
20.0
2
95
5
73
48
0
2
48
1.14
49401--49468
23
3.0
23
82
0
82
17
25
26
30
1.97
55254--55295
4
10.5
4
80
19
52
50
21
0
28
1.49
57026--57099
36
2.1
36
92
0
121
27
16
22
33
1.95
62011--62093
29
2.8
29
92
1
139
43
9
14
32
1.78

Tables:   1

The End!