Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009312.1 Hibiscus syriacus cultivar Beakdansim tig00113056_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50814

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2762--2809
14
3.5
13
80
11
51
79
2
18
0
0.84
2759--2803
11
4.2
11
82
2
56
77
2
20
0
0.87
8016--8066
19
2.6
20
90
3
77
43
5
13
37
1.69
8924--8983
30
2.0
31
86
3
86
53
6
8
31
1.57
23062--23114
24
2.2
24
87
12
83
58
13
16
11
1.63
23065--23115
25
2.1
25
92
7
88
58
13
15
11
1.63
23403--23461
17
3.5
17
68
13
50
30
13
8
47
1.73
30280--30319
17
2.4
17
86
0
53
32
15
12
40
1.84
30375--30422
18
2.7
18
86
0
69
37
6
10
45
1.64
33202--33241
17
2.4
17
86
0
53
30
15
15
40
1.87
33297--33344
18
2.7
18
86
0
69
37
6
10
45
1.64
44648--44687
17
2.4
17
86
0
53
32
15
12
40
1.84
44744--44788
17
2.6
18
85
7
65
35
6
13
44
1.70
47499--47538
17
2.4
17
86
0
53
30
15
15
40
1.87
50264--50303
17
2.4
17
86
0
53
32
15
12
40
1.84
50358--50388
16
1.9
16
100
0
62
38
6
16
38
1.74

Tables:   1

The End!