Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009318.1 Hibiscus syriacus cultivar Beakdansim tig00113075_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62918

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3794--3852
29
2.1
29
81
6
68
37
1
11
49
1.50
6106--6160
29
2.0
29
82
7
69
36
1
12
49
1.52
8436--8494
29
2.1
29
81
6
68
37
1
11
49
1.50
15401--15454
28
2.0
28
81
3
65
37
1
11
50
1.49
17745--17803
29
2.1
29
81
6
68
37
1
11
49
1.50
22484--22542
29
2.1
29
81
6
68
37
1
11
49
1.50
24858--24916
29
2.1
29
81
6
68
37
1
11
49
1.50
27232--27290
29
2.1
29
81
6
68
37
1
11
49
1.50
29604--29662
29
2.1
29
81
6
68
37
1
11
49
1.50
31974--32032
29
2.1
29
81
6
68
37
1
11
49
1.50
39156--39211
20
2.9
20
80
15
64
16
28
25
30
1.96
39207--39262
17
3.3
17
94
0
103
19
46
21
12
1.83
41337--41395
29
2.1
29
81
6
68
37
1
11
49
1.50
55397--55444
9
5.1
9
80
9
60
16
20
27
35
1.94
55397--55444
20
2.6
18
81
12
60
16
20
27
35
1.94
55477--55572
29
3.4
28
84
4
102
27
7
22
42
1.80
55506--55572
28
2.4
28
84
2
80
28
5
23
41
1.78
62542--62580
19
2.0
20
95
5
71
17
15
25
41
1.89
62545--62587
20
2.2
19
87
4
59
13
18
30
37
1.90
62579--62632
23
2.4
22
81
3
72
16
38
25
18
1.92
62659--62726
29
2.3
29
84
0
82
29
4
23
42
1.73

Tables:   1

The End!