Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009320.1 Hibiscus syriacus cultivar Beakdansim tig00113079_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50238

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1500--1575
26
2.7
28
73
18
70
43
0
0
56
0.99
3377--3428
19
2.6
20
87
6
70
42
5
15
36
1.71
6773--6802
5
5.8
5
92
7
51
0
20
0
80
0.72
6772--6821
18
3.1
16
76
18
50
2
18
2
78
0.95
7521--7570
18
2.6
19
87
6
66
44
6
16
34
1.72
9194--9259
21
3.1
21
87
8
98
18
33
25
22
1.97
9774--9876
34
3.1
33
85
4
143
52
7
3
35
1.49
10276--10925
126
5.2
127
88
2
970
34
20
23
22
1.97
15058--15174
56
2.1
56
96
0
216
21
26
30
21
1.98
17970--18026
23
2.4
24
73
5
62
42
10
14
33
1.79
18065--18127
23
2.7
23
85
0
81
34
11
15
38
1.83
18518--18987
111
4.2
111
89
1
674
45
11
11
32
1.75
19423--19462
20
2.1
19
86
9
55
42
7
7
42
1.61
19430--19789
111
3.2
111
91
2
542
44
10
12
33
1.76
20672--20712
21
2.0
20
90
4
64
51
29
0
19
1.47
23255--23310
23
2.4
23
87
0
85
35
19
19
25
1.95
23412--23470
32
2.0
29
87
12
84
23
13
25
37
1.92
24452--24651
99
2.0
99
98
0
382
40
10
14
35
1.80
37609--37659
15
3.4
15
75
8
59
27
0
3
68
1.07
37601--37659
29
2.0
29
90
6
93
27
0
5
67
1.11
37622--37665
19
2.2
20
80
15
56
31
0
4
63
1.14
41401--41434
16
2.1
17
88
5
52
55
0
0
44
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50150--50231
21
4.0
21
71
7
69
32
24
17
25
1.96

Tables:   1

The End!