Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009334.1 Hibiscus syriacus cultivar Beakdansim tig00113101_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36627

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9324--9360
7
5.4
7
93
6
67
24
29
29
16
1.96
9324--9360
13
2.7
14
91
8
67
24
29
29
16
1.96
9350--9390
17
2.4
17
95
0
73
17
24
41
17
1.89
9384--9436
19
2.8
19
97
0
97
24
32
26
16
1.97
9384--9453
9
7.3
9
73
12
59
27
28
25
18
1.98
9386--9438
10
5.5
10
80
8
65
28
32
22
16
1.96
16625--16671
7
7.0
7
81
18
64
27
29
29
12
1.93
16629--16668
13
3.1
13
92
7
64
27
30
30
12
1.93
16664--16720
17
3.4
16
87
4
78
19
24
38
17
1.93
17411--17444
17
2.0
17
88
0
50
38
20
2
38
1.68
28482--28550
33
2.1
33
83
5
86
31
1
36
30
1.67
28925--28975
19
2.6
20
87
3
68
45
5
15
33
1.71
31844--31892
24
2.0
24
84
7
64
63
0
22
14
1.30
32495--32563
33
2.1
33
83
5
86
31
1
36
30
1.67
32936--32986
19
2.6
20
87
3
68
45
5
15
33
1.71

Tables:   1

The End!