Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009335.1 Hibiscus syriacus cultivar Beakdansim tig00113102_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51253

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1209--1248
18
2.2
19
90
4
64
20
27
35
17
1.95
1241--1273
17
1.9
17
100
0
66
15
24
42
18
1.88
1267--1318
18
2.8
19
94
2
88
25
30
26
17
1.97
1267--1334
18
3.7
18
84
5
75
26
26
26
20
1.99
8478--8524
7
7.0
7
81
18
64
27
29
29
12
1.93
8482--8521
13
3.1
13
92
7
64
27
30
30
12
1.93
8517--8573
17
3.4
16
87
4
78
19
24
38
17
1.93
9263--9296
17
2.0
17
88
0
50
38
20
2
38
1.68
20367--20435
33
2.1
33
83
5
86
31
1
36
30
1.67
20811--20861
19
2.6
20
87
3
68
45
5
15
33
1.71
24407--24475
33
2.1
33
83
5
86
31
1
36
30
1.67
24851--24901
19
2.6
20
87
3
68
45
5
15
33
1.71

Tables:   1

The End!