Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009336.1 Hibiscus syriacus cultivar Beakdansim tig00113104_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78682

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4785--4829
23
2.0
23
90
0
72
31
26
24
17
1.97
16925--16974
20
2.5
20
83
0
73
20
6
22
52
1.68
20344--20730
54
7.2
54
89
1
544
30
17
21
30
1.96
27311--27882
54
10.6
54
89
2
810
29
15
22
32
1.95
28216--28260
22
2.0
23
86
4
65
35
17
15
31
1.92
35148--35216
5
13.0
5
75
11
57
20
5
2
71
1.20
35149--35191
11
4.0
11
82
14
54
18
4
0
76
0.95
35148--35191
16
2.7
17
82
10
56
20
4
0
75
0.98
37400--37443
18
2.4
19
92
3
72
22
4
0
72
1.02
37479--37546
35
1.9
36
82
8
86
25
7
0
67
1.16
49285--49547
45
5.9
45
75
7
214
23
15
19
42
1.89
49285--49547
90
2.9
89
77
10
241
23
15
19
42
1.89
49285--49556
135
2.0
134
84
2
348
23
14
19
41
1.89
50277--50930
55
12.0
54
80
4
686
29
20
18
31
1.96
63655--63697
21
2.1
20
83
12
52
16
4
6
72
1.24
64558--64603
19
2.4
19
100
0
92
19
26
26
28
1.99
65638--65772
45
3.0
45
78
0
171
34
12
22
30
1.92
76374--76541
41
4.1
41
82
4
178
38
20
10
31
1.86
76518--76595
41
1.9
41
86
0
111
39
19
7
33
1.80

Tables:   1

The End!