Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009348.1 Hibiscus syriacus cultivar Beakdansim tig00113139_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52376

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10236--10871
164
3.9
162
83
4
832
32
21
12
33
1.91
10731--11180
146
3.0
142
82
11
449
32
23
12
32
1.92
10873--11354
163
2.9
164
90
3
740
31
21
14
32
1.93
14387--14670
154
1.8
154
81
3
356
32
17
20
29
1.95
15698--15767
36
1.9
37
94
2
124
44
11
12
31
1.78
28464--28521
3
20.0
3
76
13
59
27
3
1
67
1.17
28616--28715
25
4.0
25
94
0
173
35
20
16
29
1.94
42279--42304
8
3.2
8
100
0
52
76
0
11
11
1.01
42279--42313
16
2.1
16
89
5
52
77
0
14
8
0.99
43267--43561
89
3.2
89
84
6
362
27
28
20
24
1.99
43762--43824
3
21.0
3
75
12
58
26
3
1
68
1.14
43770--43824
23
2.6
22
81
13
71
27
3
1
67
1.17
43762--43824
20
3.5
19
79
12
62
26
3
1
68
1.14
43919--44018
25
4.0
25
94
0
173
35
20
16
29
1.94
47050--47099
25
2.0
25
96
0
91
26
0
4
70
1.05
47050--47113
25
2.6
25
82
9
69
23
3
4
68
1.23
48936--48975
21
2.0
20
85
5
53
27
15
0
57
1.38
49468--49506
15
2.6
15
83
0
51
79
0
17
2
0.84

Tables:   1

The End!