Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009356.1 Hibiscus syriacus cultivar Beakdansim tig00113165_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62186

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16285--16415
47
2.8
47
95
0
226
17
10
39
32
1.84
16648--17051
152
2.7
152
92
0
655
25
17
16
40
1.89
16890--16945
29
1.9
29
88
0
85
19
16
12
51
1.75
17372--17417
18
2.6
18
92
0
83
36
19
10
32
1.87
17782--17945
54
3.1
53
83
5
204
25
24
13
36
1.92
19781--19810
8
3.8
8
100
0
60
0
20
0
80
0.72
22272--22317
6
6.9
7
83
14
53
52
13
19
15
1.75
22273--22313
21
2.0
21
90
0
64
53
12
19
14
1.72
22901--22972
36
2.0
36
86
0
99
29
9
19
41
1.83
24509--26115
803
2.0
803
99
0
3160
25
17
16
40
1.90
39219--39253
17
2.1
17
88
0
52
54
0
2
42
1.15
40798--40851
23
2.4
22
79
14
56
20
9
3
66
1.35
41217--41281
33
1.9
33
84
12
87
50
7
4
36
1.52
41382--41430
11
4.5
11
80
10
55
53
0
0
46
1.00
41382--41441
22
2.7
21
77
10
57
51
1
1
45
1.21
44290--44342
5
9.8
5
76
15
52
7
22
50
18
1.72
44283--44343
17
3.3
17
79
20
77
11
22
47
18
1.80
44276--44342
22
3.0
22
93
4
107
11
23
46
17
1.82
44341--44426
19
4.5
19
84
9
113
25
30
27
16
1.97
44383--44446
29
2.2
27
88
5
74
29
26
26
17
1.97
44345--44447
9
10.7
10
78
10
108
27
28
27
17
1.98
51626--51687
17
3.4
17
78
20
70
14
24
43
17
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51606--51636
7
4.4
7
91
0
53
29
29
25
16
1.96
51620--51681
22
2.7
22
92
5
97
12
25
43
17
1.85
51683--51790
19
5.6
19
80
12
105
27
27
26
17
1.98
51683--51789
10
11.2
9
75
13
81
28
28
27
16
1.97
51707--51790
29
2.8
30
85
7
109
27
27
27
17
1.98
51716--51790
9
7.8
9
80
11
69
29
26
26
17
1.97
58923--58980
20
2.7
22
84
15
86
12
25
43
18
1.85
58980--59066
19
4.6
19
79
12
99
26
27
27
18
1.98
58981--59086
9
11.1
10
74
10
89
28
26
25
19
1.99

Tables:   1

The End!