Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000936.1 Hibiscus syriacus cultivar Beakdansim tig00001871_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  107503

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6593--6644
23
2.3
23
83
12
63
67
0
5
26
1.13
6601--6655
25
2.2
26
81
15
62
61
1
9
27
1.36
11103--11172
2
35.0
2
100
0
140
50
0
0
50
1.00
11395--11451
28
2.1
26
84
12
71
35
0
7
57
1.26
12359--12386
2
14.0
2
100
0
56
50
0
0
50
1.00
16416--16527
35
3.2
35
87
0
161
42
21
0
34
1.59
17580--17692
35
3.2
34
87
5
154
35
0
21
42
1.59
29491--29669
74
2.4
74
87
6
247
30
26
19
23
1.98
40219--40269
21
2.4
21
80
0
57
58
0
1
39
1.09
45185--45239
18
2.9
19
89
10
87
45
10
21
21
1.82
47128--47159
2
16.0
2
100
0
64
50
0
0
50
1.00
55624--55663
21
1.9
21
89
0
62
27
17
27
27
1.98
63825--63896
37
2.1
33
82
10
81
47
2
1
48
1.25
71531--71577
15
2.9
17
75
18
55
44
0
4
51
1.21
75168--75202
18
1.9
18
88
0
52
51
0
0
48
1.00
88092--88199
28
3.9
28
97
1
200
36
0
14
48
1.51
95032--95078
14
3.1
14
76
23
51
51
0
10
38
1.37
96606--96642
17
2.1
18
90
5
58
32
2
2
62
1.23
98479--98612
60
2.3
59
82
3
162
37
19
9
33
1.84
99165--99279
46
2.5
46
84
7
135
25
9
13
52
1.70
103195--103279
35
2.5
33
76
14
82
54
10
8
27
1.63

Tables:   1

The End!