Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009361.1 Hibiscus syriacus cultivar Beakdansim tig00113184_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72482

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1947--2056
35
3.1
35
74
17
102
40
1
5
52
1.35
7980--8035
29
1.9
29
96
0
103
12
37
30
19
1.89
8051--8102
23
2.3
23
96
0
95
13
36
25
25
1.92
8380--8431
26
2.0
26
96
3
97
50
0
0
50
1.00
17049--17100
23
2.3
23
86
3
70
34
1
7
55
1.39
17631--17685
29
1.9
28
88
3
83
63
16
7
12
1.50
25843--25930
29
3.1
28
70
15
72
39
4
9
46
1.56
25858--25930
29
2.5
29
77
6
76
39
4
8
47
1.52
31963--32035
36
2.0
36
84
10
96
47
4
1
46
1.30
34918--34976
31
1.9
31
89
0
91
42
3
8
45
1.51
35000--35476
22
21.6
22
84
7
578
48
8
0
42
1.36
38509--38546
20
1.9
20
84
10
51
42
2
0
55
1.14
45001--45082
33
2.4
35
89
4
123
54
6
1
37
1.33
45552--45597
23
2.0
22
84
16
58
47
2
0
50
1.13
45550--45597
24
2.0
26
88
12
66
50
2
0
47
1.12
45556--45602
24
2.0
25
83
8
62
51
4
0
44
1.21
45972--46179
103
2.0
103
97
0
389
42
15
23
18
1.89
56994--57097
29
3.5
30
79
11
97
43
7
1
47
1.43
57001--57097
31
3.2
30
75
15
92
42
8
2
47
1.45
57001--57108
31
3.6
29
72
13
83
41
8
2
47
1.48
58249--58316
30
2.3
30
92
0
109
47
11
10
30
1.74
58465--58544
2
40.5
2
89
2
126
47
0
2
50
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60648--60699
20
2.5
20
84
3
68
40
23
13
23
1.89
64648--64689
19
2.1
19
86
8
57
50
2
2
45
1.27
71115--71160
23
2.0
23
87
8
67
41
10
17
30
1.84

Tables:   1

The End!