Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009362.1 Hibiscus syriacus cultivar Beakdansim tig00113186_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85733

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
575--629
24
2.3
25
81
6
60
29
21
16
32
1.95
4212--4246
17
2.1
17
100
0
70
31
22
22
22
1.98
7043--7082
20
1.9
20
85
10
53
32
7
27
32
1.85
12122--12163
20
2.1
20
95
0
75
78
14
4
2
1.01
17581--17630
14
3.9
13
73
21
52
78
2
20
0
0.86
17575--17630
19
3.1
18
82
17
71
78
1
19
0
0.84
17575--17630
11
4.7
11
74
21
51
78
1
19
0
0.84
20062--20094
17
1.9
17
93
0
57
39
18
3
39
1.66
24620--24679
30
2.0
31
83
3
77
26
8
10
55
1.61
29810--29875
27
2.4
27
97
0
123
30
10
28
30
1.90
30621--30650
15
2.1
14
93
6
51
46
0
13
40
1.43
38235--38273
14
2.8
14
81
14
53
0
17
2
79
0.84
38217--38291
28
2.6
29
85
10
91
1
16
6
76
1.07
38965--38996
16
2.0
16
100
0
64
31
18
6
43
1.75
47889--47918
13
2.4
13
94
5
53
26
30
0
43
1.55
63682--63725
18
2.4
18
84
0
52
15
6
38
38
1.75
68321--68350
14
2.1
14
93
0
51
40
0
30
30
1.57
76879--76930
19
2.6
21
90
6
81
46
5
13
34
1.67
85437--85474
16
2.4
16
86
8
51
68
0
18
13
1.21

Tables:   1

The End!