Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009363.1 Hibiscus syriacus cultivar Beakdansim tig00113187_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67187

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3901--3944
18
2.4
18
84
0
52
15
6
38
38
1.75
8536--8565
14
2.1
14
93
0
51
40
0
30
30
1.57
17098--17149
19
2.6
21
90
6
81
46
5
13
34
1.67
25761--25817
15
3.6
16
75
15
57
68
0
17
14
1.21
25906--25972
24
2.7
25
75
11
66
11
19
7
61
1.54
31635--31680
22
2.0
24
83
8
60
47
15
6
30
1.70
33022--33051
13
2.4
13
94
5
53
43
0
30
26
1.55
38714--38743
15
2.1
15
93
6
53
0
20
3
76
0.92
38736--38797
27
2.2
28
78
13
74
11
17
11
59
1.60
45586--45641
11
4.8
11
72
20
51
1
16
3
78
0.97
49806--49859
24
2.2
24
83
0
72
57
16
14
11
1.65
51116--51170
24
2.3
25
81
6
60
32
16
21
29
1.95
57017--57067
14
3.9
14
78
19
56
0
15
1
82
0.76
57024--57067
23
2.0
22
91
8
72
0
13
2
84
0.73
64918--64966
24
2.0
24
96
0
89
32
36
14
16
1.89

Tables:   1

The End!