Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009365.1 Hibiscus syriacus cultivar Beakdansim tig00113190_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53665

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9321--9345
12
2.1
12
100
0
50
24
24
28
24
2.00
15527--15580
19
2.8
19
94
2
90
16
29
33
20
1.95
24285--24350
28
2.5
26
75
20
73
74
4
16
4
1.16
26016--26052
18
2.1
18
89
0
56
27
18
0
54
1.44
28306--28372
35
1.9
35
84
6
91
23
14
8
52
1.70
28758--28817
23
2.6
23
82
12
86
10
20
35
35
1.86
28852--28885
13
2.8
12
91
8
59
17
0
29
52
1.45
29811--29854
20
2.2
20
91
0
70
9
13
43
34
1.76
32380--32418
2
20.0
2
84
5
53
43
0
5
51
1.24
32387--32418
14
2.3
14
100
0
64
43
0
6
50
1.27
32373--32411
12
3.4
12
82
10
55
41
0
5
53
1.23
44164--44832
105
6.4
105
96
0
1214
33
25
18
23
1.97
50258--50295
18
2.1
18
100
0
76
18
50
21
10
1.76
52682--52790
24
4.6
24
86
5
132
23
14
19
42
1.88

Tables:   1

The End!