Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009384.1 Hibiscus syriacus cultivar Beakdansim tig00113272_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65481

Tables:   1   

This is table  1  of  1  ( 51 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5487--5522
17
2.0
19
89
10
58
33
11
0
55
1.35
6134--6163
14
2.2
13
94
5
51
66
0
0
33
0.92
9196--9564
20
18.5
20
84
4
449
34
26
18
19
1.95
10235--10281
24
2.0
24
87
8
69
25
14
21
38
1.92
10456--10480
12
2.1
12
100
0
50
72
0
28
0
0.86
12778--13146
33
10.5
34
78
14
317
46
18
21
14
1.84
12806--13146
52
6.4
52
92
5
574
46
17
21
14
1.83
12778--13146
19
20.8
19
78
17
420
46
18
21
14
1.84
13153--13254
19
5.6
19
85
12
151
14
23
17
44
1.86
13362--13398
14
2.6
14
91
0
65
45
21
0
32
1.52
15260--15394
19
7.6
19
76
16
137
45
24
19
10
1.81
15316--15372
14
3.7
14
77
20
60
45
24
21
8
1.80
15297--15389
33
2.8
33
98
0
177
47
22
20
9
1.79
15260--15394
52
2.5
54
75
18
131
45
24
19
10
1.81
15390--15518
19
7.3
19
75
17
125
8
17
28
45
1.77
15390--15481
33
2.8
33
93
3
150
7
18
28
45
1.76
15562--15939
93
4.1
93
97
2
726
46
18
12
22
1.83
15562--15939
183
2.0
186
97
1
726
46
18
12
22
1.83
17640--17729
14
5.7
14
74
23
81
42
23
25
8
1.83
17632--17746
33
3.5
33
95
0
212
45
20
24
9
1.81
17639--17751
19
6.8
18
72
23
88
43
22
24
9
1.83
17763--17817
14
3.6
14
73
21
56
9
25
23
41
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17747--17817
33
2.2
33
94
0
124
8
22
25
43
1.81
17758--17839
33
2.5
33
89
2
119
9
25
21
42
1.84
17770--17858
20
4.8
20
72
19
75
12
24
19
43
1.85
17938--18008
33
2.2
33
92
0
115
47
18
22
11
1.80
18190--18244
22
2.5
22
81
0
74
20
16
40
23
1.91
18390--18584
20
9.6
20
81
6
214
18
19
25
35
1.95
18390--18584
60
3.2
60
82
1
246
18
19
25
35
1.95
18577--18653
21
3.7
20
70
13
57
27
16
23
32
1.96
18639--18690
20
2.6
20
96
0
95
21
13
26
38
1.90
19581--19623
14
3.1
14
87
12
63
39
0
4
55
1.20
21350--21383
16
2.1
17
88
5
52
64
0
0
35
0.94
22075--22124
20
2.5
20
72
18
50
36
4
8
52
1.50
22108--22147
21
2.0
20
85
5
53
42
2
0
55
1.13
23731--23825
44
2.1
44
88
5
138
43
4
8
44
1.54
23745--23832
44
2.0
45
93
2
151
40
3
7
47
1.49
26253--26349
8
12.2
8
70
15
51
49
1
0
49
1.07
26253--26320
22
3.2
22
80
12
79
47
0
0
52
1.00
26269--26347
30
2.4
34
79
14
94
46
1
0
51
1.08
26423--26503
8
9.8
8
71
19
51
48
0
1
50
1.08
26462--26525
31
2.1
31
85
5
85
54
0
0
45
0.99
26499--26546
23
2.1
23
88
0
69
58
0
0
41
0.98
32353--32397
21
2.1
21
87
0
63
31
28
24
15
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34090--34156
22
3.0
22
95
2
116
19
26
28
25
1.99
37291--37335
21
2.1
21
87
0
63
31
28
24
15
1.96
39030--39096
22
3.0
22
95
2
116
19
26
28
25
1.99
42290--42324
17
2.1
17
88
0
52
60
8
5
25
1.49
42421--42563
60
2.4
60
76
6
155
32
25
6
34
1.81
47191--47235
23
2.0
23
82
8
56
37
0
2
60
1.09
64423--64464
20
2.0
21
86
4
59
26
33
9
30
1.88

Tables:   1

The End!