Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009391.1 Hibiscus syriacus cultivar Beakdansim tig00113290_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43194

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
287--311
13
1.9
13
100
0
50
52
8
0
40
1.31
2378--2417
21
1.9
21
89
0
62
10
25
40
25
1.86
6261--6300
21
1.9
21
85
10
55
35
10
2
52
1.48
14715--14756
22
2.0
22
90
4
68
38
0
2
59
1.10
14722--14768
21
2.1
22
84
7
60
40
0
2
57
1.11
17814--17865
21
2.6
20
79
8
61
40
0
1
57
1.10
17827--17865
21
1.9
21
89
5
62
38
0
2
58
1.12
20625--20672
15
2.8
17
84
12
55
37
0
2
60
1.09
20625--20662
19
2.1
19
90
5
60
34
0
2
63
1.09
20843--20914
31
2.4
30
80
11
78
50
2
2
44
1.31
21289--21324
17
2.1
17
89
5
54
30
0
2
66
1.06
21317--21355
2
19.5
2
100
0
78
51
0
0
48
1.00
21705--21781
38
2.0
39
97
2
147
25
10
10
53
1.67
29186--29218
16
2.1
16
100
0
66
45
6
0
48
1.27
29794--29833
18
2.2
18
86
8
55
42
0
2
55
1.13
32986--33023
18
2.2
17
86
13
51
42
0
2
55
1.14
36149--36189
18
2.2
19
87
12
59
43
0
2
53
1.13
37541--37567
2
13.5
2
100
0
54
48
0
0
51
1.00
41514--41795
140
2.0
141
96
1
521
36
14
13
35
1.86

Tables:   1

The End!