Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009392.1 Hibiscus syriacus cultivar Beakdansim tig00113292_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42692

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
199--255
3
19.7
3
89
7
91
33
0
1
64
1.04
13513--13596
16
5.2
16
80
17
77
77
0
13
9
0.99
13526--13570
9
5.4
9
75
20
53
80
0
11
8
0.92
14817--15071
105
2.4
105
85
2
341
39
17
18
24
1.92
15237--15285
3
16.7
3
87
4
73
36
0
2
61
1.08
27424--27811
88
4.4
87
87
1
506
31
22
25
20
1.98
27424--27811
44
8.8
44
85
3
457
31
22
25
20
1.98
33428--33492
23
2.8
23
83
0
85
30
23
26
20
1.98
37319--37365
23
2.0
23
84
8
60
36
12
19
31
1.89
39827--39873
21
2.2
21
100
0
94
29
25
29
14
1.95
39860--39899
9
4.2
9
81
12
53
37
32
17
12
1.87
39861--39899
20
2.0
20
94
0
69
38
30
17
12
1.88
39902--39958
28
2.0
28
93
0
96
26
21
33
19
1.97
39977--40110
29
4.6
29
94
1
216
15
31
31
21
1.95
40420--40470
26
2.0
26
88
3
77
45
11
35
7
1.70
40806--41034
37
5.7
38
69
18
117
45
8
2
43
1.47
40814--41161
51
7.0
51
71
17
135
45
9
2
42
1.49
40819--41155
26
13.6
26
74
12
237
45
9
2
43
1.50
40819--41210
124
3.2
123
90
6
597
45
9
2
43
1.49
40866--41131
98
2.8
95
82
12
296
44
9
2
43
1.49

Tables:   1

The End!