Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009394.1 Hibiscus syriacus cultivar Beakdansim tig00113295_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57025

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1119--1192
2
38.5
2
92
8
127
50
0
0
50
1.00
1119--1197
36
2.2
36
95
2
142
48
0
0
51
1.00
4226--4284
21
2.8
20
73
16
57
25
15
18
40
1.90
4277--4316
2
20.0
2
100
0
80
50
0
0
50
1.00
4366--4446
23
3.5
23
91
0
117
17
20
20
40
1.91
11449--11481
2
17.0
2
93
6
59
48
0
0
51
1.00
15312--15379
29
2.3
29
87
5
93
38
19
5
36
1.76
15333--15389
29
2.0
28
89
3
87
36
19
5
38
1.74
17278--17324
16
2.8
17
87
6
78
8
10
4
76
1.13
22020--22075
3
18.7
3
78
14
62
35
0
1
62
1.06
22020--22075
17
3.3
16
87
9
69
35
0
1
62
1.06
23595--23625
15
2.1
15
94
5
55
16
0
0
83
0.64
23882--23944
2
31.5
2
100
0
126
49
0
0
50
1.00
36907--37366
55
8.6
55
79
8
387
32
14
23
30
1.94
37036--37317
51
5.4
51
80
9
291
32
14
25
28
1.94
37036--37317
106
2.7
104
83
6
338
32
14
25
28
1.94
37036--37366
157
2.1
159
82
7
397
32
13
24
29
1.94
37084--37398
157
2.0
156
79
6
341
32
14
24
28
1.94
37566--37619
3
17.7
3
81
11
65
35
0
1
62
1.06
39424--39462
2
19.5
2
94
0
69
46
0
2
51
1.14
49257--49296
3
12.7
3
84
10
53
65
2
0
32
1.06
49834--49908
29
2.7
28
82
10
82
37
17
5
40
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49853--49909
29
2.0
28
89
3
87
36
19
5
38
1.74

Tables:   1

The End!