Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009400.1 Hibiscus syriacus cultivar Beakdansim tig00113327_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56336

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
600--639
19
2.2
19
86
4
55
77
5
5
12
1.09
7749--7788
19
2.0
20
85
4
55
62
0
15
22
1.32
11965--12021
13
4.7
12
74
10
53
3
17
1
77
1.00
12289--12328
19
2.0
20
85
4
55
62
0
15
22
1.32
16119--16211
35
2.7
35
87
0
141
34
3
35
26
1.73
17728--17761
17
2.0
17
100
0
68
29
23
17
29
1.97
20846--20875
15
2.1
15
93
6
53
0
20
3
76
0.92
24754--24778
12
2.1
12
100
0
50
48
8
28
16
1.74
26346--26371
11
2.4
11
100
0
52
0
15
7
76
0.99
26365--26391
10
2.7
10
100
0
54
0
0
7
92
0.38
26353--26391
10
3.5
11
86
13
53
0
5
7
87
0.68
35922--35967
13
3.3
14
77
19
51
2
19
2
76
1.00
40421--40471
19
2.6
20
90
3
77
43
5
13
37
1.69
41169--41208
20
2.0
21
85
5
55
50
7
17
25
1.72
41371--41430
30
2.0
31
83
3
77
55
10
8
26
1.61
43450--43558
35
3.1
35
82
2
139
32
3
35
28
1.75
47634--47743
35
3.1
35
86
2
141
32
3
35
28
1.75
54613--54652
6
6.7
6
83
11
55
0
17
2
80
0.83
54613--54652
13
3.3
12
86
6
55
0
17
2
80
0.83
54613--54658
25
1.9
23
86
8
65
0
17
4
78
0.91
55451--55501
19
2.6
20
87
3
68
45
5
15
33
1.71

Tables:   1

The End!