Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009402.1 Hibiscus syriacus cultivar Beakdansim tig00113331_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86555

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15981--16022
19
2.2
19
100
0
84
52
4
4
38
1.44
16511--16634
57
2.1
59
86
7
173
18
13
21
45
1.84
16511--16646
61
2.3
57
85
8
159
20
13
22
43
1.87
21656--21725
30
2.3
30
92
0
122
31
12
12
42
1.81
22799--23738
469
2.0
468
98
0
1826
27
21
14
36
1.92
25744--25786
22
1.9
23
90
4
70
11
0
20
67
1.22
30195--30333
65
2.1
65
93
1
233
33
17
7
41
1.78
35390--35468
39
2.0
39
95
0
140
43
7
27
21
1.80
43460--43508
20
2.2
22
79
13
57
32
4
4
59
1.35
47466--47500
6
5.8
6
100
0
70
65
0
34
0
0.93
50878--51017
60
2.3
62
85
4
178
43
5
18
32
1.72
50878--51038
60
2.6
59
80
9
173
42
4
18
34
1.71
67817--67854
20
1.9
19
89
5
58
36
2
5
55
1.37
76824--76857
6
5.7
6
89
0
50
38
14
32
14
1.87
78532--78593
3
20.7
3
81
0
52
4
8
29
58
1.48
78532--78593
18
3.4
18
77
0
70
4
8
29
58
1.48
80194--80247
6
9.0
6
93
0
90
18
31
1
48
1.59
82324--82477
79
2.0
79
84
6
206
33
12
12
40
1.81
85170--85212
22
2.0
22
86
9
61
46
4
2
46
1.36

Tables:   1

The End!