Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01009407.1 Hibiscus syriacus cultivar Beakdansim tig00113339_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 77292
ACGTcount: A:0.30, C:0.20, G:0.18, T:0.32
Found at i:116 original size:7 final size:7
Alignment explanation
Indices: 1--8209 Score: 12023
Period size: 7 Copynumber: 1195.0 Consensus size: 7
1 AAGCCCT
1 AAGCCCT
8 AA-CCCT
1 AAGCCCT
14 AA-CCCT
1 AAGCCCT
20 AAAGCCCT
1 -AAGCCCT
28 AA-CCCT
1 AAGCCCT
34 AA--CCT
1 AAGCCCT
*
39 AAACCCT
1 AAGCCCT
46 AA-CCCT
1 AAGCCCT
52 AAAGCCCT
1 -AAGCCCT
*
60 AA-CCCA
1 AAGCCCT
66 AAGCCCT
1 AAGCCCT
*
73 AA-ACCT
1 AAGCCCT
*
79 AAACCC-
1 AAGCCCT
85 AA-CCCT
1 AAGCCCT
91 AA-CCCT
1 AAGCCCT
97 AA-CCCT
1 AAGCCCT
103 AAAGCCCT
1 -AAGCCCT
111 AAGCCCT
1 AAGCCCT
118 AA-CCCT
1 AAGCCCT
124 AA-CCCT
1 AAGCCCT
130 AAGCCCT
1 AAGCCCT
137 AA-CCCT
1 AAGCCCT
*
143 AAACCCT
1 AAGCCCT
150 -A-CCCT
1 AAGCCCT
*
155 AAACCCT
1 AAGCCCT
162 AA-CCCT
1 AAGCCCT
168 AA-CCCT
1 AAGCCCT
174 AA-CCCT
1 AAGCCCT
*
180 AAACCCT
1 AAGCCCT
187 AAGCCCT
1 AAGCCCT
194 -A-CCCT
1 AAGCCCT
199 AAGCCCT
1 AAGCCCT
206 AA-CCCT
1 AAGCCCT
212 AAG-CCT
1 AAGCCCT
218 AA-CCCT
1 AAGCCCT
224 AAGCCCT
1 AAGCCCT
*
231 AAACCCT
1 AAGCCCT
238 AAGCCCT
1 AAGCCCT
245 AAG-CCT
1 AAGCCCT
251 AA-CCCT
1 AAGCCCT
257 AA-CCCT
1 AAGCCCT
263 AA-CCCT
1 AAGCCCT
*
269 AAACCCT
1 AAGCCCT
*
276 AACCCCT
1 AAGCCCT
283 AA-CCCT
1 AAGCCCT
*
289 AAACCCT
1 AAGCCCT
296 AAGCCCT
1 AAGCCCT
303 AA-CCCT
1 AAGCCCT
*
309 AAACCCT
1 AAGCCCT
316 AAGCCCT
1 AAGCCCT
*
323 AAACCCT
1 AAGCCCT
330 AAGCCCT
1 AAGCCCT
337 AAAGCCCT
1 -AAGCCCT
*
345 AAACCCT
1 AAGCCCT
*
352 AAACCCT
1 AAGCCCT
359 AA-CCCT
1 AAGCCCT
365 AA-CCCT
1 AAGCCCT
*
371 AAACCCT
1 AAGCCCT
*
378 AAACCCT
1 AAGCCCT
385 AA-CCCT
1 AAGCCCT
391 AA-CCCT
1 AAGCCCT
397 AA-CCCT
1 AAGCCCT
403 AA-CCCT
1 AAGCCCT
409 AA-CCCT
1 AAGCCCT
415 AAGCCCT
1 AAGCCCT
422 AAG-CCT
1 AAGCCCT
428 AA-CCCT
1 AAGCCCT
*
434 AAAACCCT
1 -AAGCCCT
442 AA-CCCT
1 AAGCCCT
448 AA-CCCT
1 AAGCCCT
*
454 AAACCCT
1 AAGCCCT
*
461 AAACCCT
1 AAGCCCT
468 AA-CCCT
1 AAGCCCT
*
474 AAACCCT
1 AAGCCCT
*
481 AAACCCT
1 AAGCCCT
*
488 AAACCCT
1 AAGCCCT
495 AAAGCCCT
1 -AAGCCCT
*
503 AAACCCT
1 AAGCCCT
510 AAGCCCT
1 AAGCCCT
*
517 AA-ACCT
1 AAGCCCT
*
523 AAACCCT
1 AAGCCCT
*
530 AA-ACCT
1 AAGCCCT
536 AA-CCCT
1 AAGCCCT
542 AA-CCCT
1 AAGCCCT
548 AA-CCCT
1 AAGCCCT
554 AAGCCCT
1 AAGCCCT
*
561 AA-ACCT
1 AAGCCCT
567 AA--CCT
1 AAGCCCT
572 AA-CCCT
1 AAGCCCT
578 AAAGCCCT
1 -AAGCCCT
*
586 AAACCCT
1 AAGCCCT
593 AAGCCCT
1 AAGCCCT
*
600 AAACCCT
1 AAGCCCT
607 AA-CCCT
1 AAGCCCT
613 AAGCCCT
1 AAGCCCT
620 AA--CCT
1 AAGCCCT
625 AA-CCCT
1 AAGCCCT
631 AAG-CCT
1 AAGCCCT
637 AAAGCCCT
1 -AAGCCCT
645 AAAGCCCT
1 -AAGCCCT
653 AA--CCT
1 AAGCCCT
658 AA-CCCT
1 AAGCCCT
*
664 AAACCCT
1 AAGCCCT
671 AAGCCCT
1 AAGCCCT
678 AAAGCCCT
1 -AAGCCCT
686 AAGCCCT
1 AAGCCCT
693 AAGCCCT
1 AAGCCCT
700 AA-CCCT
1 AAGCCCT
706 AAGCCCT
1 AAGCCCT
713 AAGCCCT
1 AAGCCCT
720 AA-CCCT
1 AAGCCCT
726 AAGCCCT
1 AAGCCCT
733 AA-CCCT
1 AAGCCCT
739 AAGCCCT
1 AAGCCCT
746 -AGCCCT
1 AAGCCCT
752 AAGCCCT
1 AAGCCCT
759 AAGCCCT
1 AAGCCCT
766 AAG-CCT
1 AAGCCCT
772 AAGCCCT
1 AAGCCCT
779 AAGCCCT
1 AAGCCCT
786 AAGCCCT
1 AAGCCCT
793 AAG-CCT
1 AAGCCCT
799 AAGCCCT
1 AAGCCCT
806 AAGCCCT
1 AAGCCCT
813 AAGCCCT
1 AAGCCCT
820 AAGCCCT
1 AAGCCCT
827 AAG-CCT
1 AAGCCCT
833 AAGCCCT
1 AAGCCCT
840 AAGCCCT
1 AAGCCCT
847 AAGCCCT
1 AAGCCCT
854 AAGCCCT
1 AAGCCCT
861 AAGCCCT
1 AAGCCCT
868 AAGCCCT
1 AAGCCCT
875 AAGCCCT
1 AAGCCCT
882 AAGCCCT
1 AAGCCCT
889 AAGCCCT
1 AAGCCCT
896 AAG-CCT
1 AAGCCCT
902 AAGCCCT
1 AAGCCCT
909 AAGCCCT
1 AAGCCCT
916 AAGCCCT
1 AAGCCCT
923 AAGCCCT
1 AAGCCCT
930 AAGCCCT
1 AAGCCCT
937 AAGCCCT
1 AAGCCCT
944 AAGCCCT
1 AAGCCCT
951 AAGCCCT
1 AAGCCCT
958 AAGCCCT
1 AAGCCCT
965 AAG-CCT
1 AAGCCCT
971 AAG-CCT
1 AAGCCCT
977 AAGCCCT
1 AAGCCCT
984 AAGCCCT
1 AAGCCCT
991 AAG-CCT
1 AAGCCCT
997 AAGCCCT
1 AAGCCCT
1004 AAG-CCT
1 AAGCCCT
1010 AAGCCCT
1 AAGCCCT
1017 AAG-CCT
1 AAGCCCT
1023 AAGCCCT
1 AAGCCCT
1030 AAG-CCT
1 AAGCCCT
1036 AAGCCCT
1 AAGCCCT
1043 AAGCCCT
1 AAGCCCT
1050 AAGCCCT
1 AAGCCCT
1057 AAGCCCT
1 AAGCCCT
1064 AAGCCCT
1 AAGCCCT
1071 AAG-CCT
1 AAGCCCT
1077 AAG-CCT
1 AAGCCCT
1083 AAGCCCT
1 AAGCCCT
1090 AAGCCCT
1 AAGCCCT
1097 AAGCCCT
1 AAGCCCT
1104 AAGAGCCCT
1 -A-AGCCCT
1113 AAGCCCT
1 AAGCCCT
1120 AAG-CCT
1 AAGCCCT
1126 AAGCCCT
1 AAGCCCT
1133 AAGCCCCCT
1 AAG--CCCT
1142 AAG-CCT
1 AAGCCCT
1148 AAGCCCT
1 AAGCCCT
1155 AAGCCCT
1 AAGCCCT
1162 AAGCCCT
1 AAGCCCT
1169 AAGCCCT
1 AAGCCCT
1176 AAGCCCT
1 AAGCCCT
1183 AAGCCCT
1 AAGCCCT
1190 AAGCCCT
1 AAGCCCT
1197 AAGCCCT
1 AAGCCCT
1204 AAGCCCT
1 AAGCCCT
1211 AAG-CCT
1 AAGCCCT
1217 AAG-CCT
1 AAGCCCT
1223 AAG-CCT
1 AAGCCCT
1229 AAGCCCT
1 AAGCCCT
1236 AAGCCCT
1 AAGCCCT
1243 AAGCCCT
1 AAGCCCT
1250 AAGCCCT
1 AAGCCCT
1257 AAG-CCT
1 AAGCCCT
1263 AAGCCCT
1 AAGCCCT
1270 AAGCCCT
1 AAGCCCT
1277 AAG-CCT
1 AAGCCCT
1283 AAGCCCT
1 AAGCCCT
1290 AA-CCCT
1 AAGCCCT
1296 AAGCCCT
1 AAGCCCT
*
1303 AAGAACCT
1 AAG-CCCT
1311 AAG-CCT
1 AAGCCCT
1317 AAG-CCT
1 AAGCCCT
1323 AAGCCCT
1 AAGCCCT
1330 AAGCCCT
1 AAGCCCT
1337 AAGCCCT
1 AAGCCCT
1344 AAGCCCT
1 AAGCCCT
1351 AAGCCCT
1 AAGCCCT
1358 AAGCCCT
1 AAGCCCT
1365 AAGCCCT
1 AAGCCCT
1372 AAGCCCT
1 AAGCCCT
1379 AAGCCCT
1 AAGCCCT
1386 AAGCCC-
1 AAGCCCT
1392 -AGCCCT
1 AAGCCCT
1398 AAGCCCT
1 AAGCCCT
1405 AAGCCCT
1 AAGCCCT
1412 AAGCCCT
1 AAGCCCT
1419 AAGCCCT
1 AAGCCCT
1426 AAGCCCT
1 AAGCCCT
1433 AAG-CCT
1 AAGCCCT
1439 AAGCCCT
1 AAGCCCT
1446 AAG-CCT
1 AAGCCCT
1452 AAGCCCT
1 AAGCCCT
1459 AAGCCCT
1 AAGCCCT
1466 AAGCCCT
1 AAGCCCT
1473 AAGCCCT
1 AAGCCCT
1480 AAGCCCT
1 AAGCCCT
1487 AAGCCCT
1 AAGCCCT
1494 AAGCCCT
1 AAGCCCT
1501 AAGCCCT
1 AAGCCCT
1508 AAGCCCT
1 AAGCCCT
1515 AAG-CCT
1 AAGCCCT
1521 AAGCCCT
1 AAGCCCT
1528 AAGCCCT
1 AAGCCCT
1535 AAGCCCCCT
1 AAG--CCCT
1544 AAGCCCT
1 AAGCCCT
1551 AAGCCCT
1 AAGCCCT
1558 AAGCCCT
1 AAGCCCT
1565 AAGCCCT
1 AAGCCCT
1572 AAGCCCT
1 AAGCCCT
1579 AAGCCCT
1 AAGCCCT
1586 AAGCCCT
1 AAGCCCT
1593 AAGCCCT
1 AAGCCCT
1600 AAGCCCT
1 AAGCCCT
1607 AAGCCCT
1 AAGCCCT
1614 AAGCCCT
1 AAGCCCT
1621 AAGCCCT
1 AAGCCCT
1628 AAGCCCT
1 AAGCCCT
1635 AAG-CCT
1 AAGCCCT
1641 AAGCCCT
1 AAGCCCT
1648 AAGCCCT
1 AAGCCCT
1655 AAGCCCT
1 AAGCCCT
1662 AAGCCCT
1 AAGCCCT
1669 AAGCCCT
1 AAGCCCT
1676 AAGCCCT
1 AAGCCCT
1683 AAGCCCT
1 AAGCCCT
1690 AAGCCCT
1 AAGCCCT
1697 AAGCCCT
1 AAGCCCT
1704 AAGCCCT
1 AAGCCCT
1711 AAGCCCT
1 AAGCCCT
1718 AAG-CCT
1 AAGCCCT
1724 AAGCCCT
1 AAGCCCT
1731 AAGCCCT
1 AAGCCCT
1738 AAGCCCT
1 AAGCCCT
1745 AAGCCCT
1 AAGCCCT
1752 AAGCCCT
1 AAGCCCT
1759 AAGCCCT
1 AAGCCCT
1766 AAGCCCT
1 AAGCCCT
1773 AAGCCCT
1 AAGCCCT
1780 AAG-CCT
1 AAGCCCT
1786 AAGCCCT
1 AAGCCCT
1793 AAGCCCT
1 AAGCCCT
1800 AAGCCCT
1 AAGCCCT
1807 AAGCCCT
1 AAGCCCT
1814 AAGCCCT
1 AAGCCCT
1821 AAGCCCT
1 AAGCCCT
1828 AAGCCCT
1 AAGCCCT
1835 AAGCCCT
1 AAGCCCT
1842 AAGCCC-
1 AAGCCCT
1848 AAGCCCT
1 AAGCCCT
1855 AAGCCCT
1 AAGCCCT
1862 AAG-CCT
1 AAGCCCT
1868 AAGCCCT
1 AAGCCCT
1875 AAGCCCT
1 AAGCCCT
1882 AAGCCCT
1 AAGCCCT
1889 AAGCCCT
1 AAGCCCT
1896 AAGCCCT
1 AAGCCCT
1903 AAGCCCT
1 AAGCCCT
1910 AAGCCCT
1 AAGCCCT
1917 AAG-CCT
1 AAGCCCT
1923 AAGCCCT
1 AAGCCCT
1930 AAGCCCT
1 AAGCCCT
1937 AAGCCCT
1 AAGCCCT
1944 AAG-CCT
1 AAGCCCT
1950 AAG-CCT
1 AAGCCCT
1956 AAGCCCT
1 AAGCCCT
1963 AAGCCCT
1 AAGCCCT
1970 AAGCCCT
1 AAGCCCT
1977 AAGCCCT
1 AAGCCCT
1984 AAGCCCT
1 AAGCCCT
1991 AAGCCCT
1 AAGCCCT
1998 AAGCCCT
1 AAGCCCT
2005 AAGCCCT
1 AAGCCCT
2012 AAGCCCT
1 AAGCCCT
2019 AAGCCCT
1 AAGCCCT
2026 AAGCCCT
1 AAGCCCT
2033 AAGCCCT
1 AAGCCCT
2040 AAGCCCT
1 AAGCCCT
2047 AAGCCCT
1 AAGCCCT
2054 AAGCCCT
1 AAGCCCT
2061 AAGCCCT
1 AAGCCCT
2068 AAGCCCT
1 AAGCCCT
2075 AAGCCCT
1 AAGCCCT
2082 AAGCCCT
1 AAGCCCT
2089 AAGCCCT
1 AAGCCCT
2096 AAGCCCT
1 AAGCCCT
2103 AAGCCCT
1 AAGCCCT
2110 AAGCCCT
1 AAGCCCT
2117 AAGCCCT
1 AAGCCCT
2124 AAGCCCT
1 AAGCCCT
2131 AAGCCCT
1 AAGCCCT
2138 AAGCCCT
1 AAGCCCT
2145 AAGCCCT
1 AAGCCCT
2152 AAGCCCT
1 AAGCCCT
2159 AAGCCCT
1 AAGCCCT
2166 AAGCCCT
1 AAGCCCT
2173 AAG-CCT
1 AAGCCCT
2179 AAGCCCT
1 AAGCCCT
2186 AAGCCCT
1 AAGCCCT
2193 AAGCCCT
1 AAGCCCT
2200 AAGCCCT
1 AAGCCCT
2207 AAGCCCT
1 AAGCCCT
2214 AAGCCCT
1 AAGCCCT
2221 AAGCCCT
1 AAGCCCT
2228 AAGCCCT
1 AAGCCCT
2235 AAGCCCT
1 AAGCCCT
2242 AAGCCCT
1 AAGCCCT
2249 AAGCCCT
1 AAGCCCT
2256 AAGCCCT
1 AAGCCCT
2263 AAGCCCT
1 AAGCCCT
2270 AAGCCCT
1 AAGCCCT
2277 AAGCCCT
1 AAGCCCT
2284 AAGCCCT
1 AAGCCCT
2291 AAGCCCT
1 AAGCCCT
2298 AAGCCCT
1 AAGCCCT
2305 AAGCCCT
1 AAGCCCT
2312 AAGCCCT
1 AAGCCCT
2319 AAGCCCT
1 AAGCCCT
2326 AAGCCCT
1 AAGCCCT
2333 AAG-CCT
1 AAGCCCT
2339 AAGCCCT
1 AAGCCCT
2346 AAGCCCT
1 AAGCCCT
2353 AAGCCCT
1 AAGCCCT
2360 AAGCCCT
1 AAGCCCT
2367 AAGCCCT
1 AAGCCCT
2374 AAGCCCT
1 AAGCCCT
2381 -AGCCCT
1 AAGCCCT
2387 AAGCCCT
1 AAGCCCT
2394 AAG-CCT
1 AAGCCCT
2400 AAGCCCT
1 AAGCCCT
2407 AAGCCCT
1 AAGCCCT
2414 AAGCCCAT
1 AAGCCC-T
2422 AAG-CCT
1 AAGCCCT
2428 AAG-CCT
1 AAGCCCT
2434 AAGCCCT
1 AAGCCCT
2441 AAG-CCT
1 AAGCCCT
2447 AA--CCT
1 AAGCCCT
2452 AAGCCCT
1 AAGCCCT
2459 AAGCCCT
1 AAGCCCT
2466 AAG-CCT
1 AAGCCCT
2472 AAGCCCT
1 AAGCCCT
2479 AAGCCCT
1 AAGCCCT
2486 AAGCCCT
1 AAGCCCT
2493 AAGCCCT
1 AAGCCCT
2500 AAGCCCT
1 AAGCCCT
2507 AAGCCCT
1 AAGCCCT
2514 AAGCCCT
1 AAGCCCT
2521 AAGCCCT
1 AAGCCCT
2528 AAGCCCT
1 AAGCCCT
2535 AAGCCCT
1 AAGCCCT
2542 AAG-CCT
1 AAGCCCT
2548 AAG-CCT
1 AAGCCCT
2554 AAGCCCT
1 AAGCCCT
2561 AAGCCCT
1 AAGCCCT
2568 AAGCCCT
1 AAGCCCT
2575 AAG-CCT
1 AAGCCCT
2581 AAGCCCT
1 AAGCCCT
2588 AAGCCCT
1 AAGCCCT
2595 AAGCCCT
1 AAGCCCT
2602 AAGCCCT
1 AAGCCCT
2609 AAGCCCT
1 AAGCCCT
2616 AAGCCCT
1 AAGCCCT
2623 AAGCCCT
1 AAGCCCT
2630 AAG-CCT
1 AAGCCCT
2636 AAGCCCT
1 AAGCCCT
2643 AAGCCCT
1 AAGCCCT
2650 AAGCCCT
1 AAGCCCT
2657 AAGCCCT
1 AAGCCCT
2664 AAGCCCT
1 AAGCCCT
2671 AAGCCCT
1 AAGCCCT
2678 AAGCCCT
1 AAGCCCT
2685 AAGCCCT
1 AAGCCCT
2692 AAGCCCT
1 AAGCCCT
2699 AAGCCCT
1 AAGCCCT
2706 AAGCCCT
1 AAGCCCT
2713 AAGCCCT
1 AAGCCCT
2720 AAGCCCT
1 AAGCCCT
2727 AAGCCCT
1 AAGCCCT
2734 AAG-CCT
1 AAGCCCT
2740 AAGCCCT
1 AAGCCCT
2747 AAGCCCT
1 AAGCCCT
2754 AAGCCCT
1 AAGCCCT
2761 AAGCCCT
1 AAGCCCT
2768 AAGCCCT
1 AAGCCCT
2775 AAGCCCT
1 AAGCCCT
2782 AAGCCCT
1 AAGCCCT
2789 AAGCCCT
1 AAGCCCT
2796 AAGCCCT
1 AAGCCCT
2803 AAG-CCT
1 AAGCCCT
2809 AAGCCCT
1 AAGCCCT
2816 AAGCCCT
1 AAGCCCT
2823 AAG-CCT
1 AAGCCCT
2829 AAGCCCT
1 AAGCCCT
2836 AAGCCCT
1 AAGCCCT
2843 AAGCCCT
1 AAGCCCT
2850 AAGCCCT
1 AAGCCCT
2857 AAG-CCT
1 AAGCCCT
2863 AAGCCCT
1 AAGCCCT
2870 AAGCCCT
1 AAGCCCT
2877 AAGCCCT
1 AAGCCCT
2884 AAGCCCT
1 AAGCCCT
2891 AAGCCCT
1 AAGCCCT
2898 AAGCCCT
1 AAGCCCT
2905 AAGCCCT
1 AAGCCCT
2912 AAG-CCT
1 AAGCCCT
2918 AAGCCCT
1 AAGCCCT
2925 AAGCCCT
1 AAGCCCT
2932 AAGCCCT
1 AAGCCCT
2939 AAGCCCT
1 AAGCCCT
2946 AAG-CCT
1 AAGCCCT
2952 AAGCCCT
1 AAGCCCT
2959 AAGCCCT
1 AAGCCCT
2966 AAGCCCT
1 AAGCCCT
2973 AAG-CCT
1 AAGCCCT
2979 AAGCCCT
1 AAGCCCT
2986 AAGCCCT
1 AAGCCCT
2993 AAGCCCT
1 AAGCCCT
3000 AAGCCCT
1 AAGCCCT
3007 AAGCCCT
1 AAGCCCT
3014 AAGCCCT
1 AAGCCCT
3021 AAGCCCT
1 AAGCCCT
3028 AAGCCCT
1 AAGCCCT
3035 AAGCCCT
1 AAGCCCT
3042 AAGCCCT
1 AAGCCCT
3049 AAG-CCT
1 AAGCCCT
3055 AAGCCCT
1 AAGCCCT
3062 AAGCCCT
1 AAGCCCT
3069 AAGCCCT
1 AAGCCCT
3076 AAGCCCT
1 AAGCCCT
3083 AAGCCCT
1 AAGCCCT
3090 AAGCCCT
1 AAGCCCT
3097 AAGCCCT
1 AAGCCCT
3104 AAGCCCT
1 AAGCCCT
3111 AAGCCCT
1 AAGCCCT
3118 AAGCCCT
1 AAGCCCT
3125 AAGCCCT
1 AAGCCCT
3132 AAGCCCT
1 AAGCCCT
3139 AAG-CCT
1 AAGCCCT
3145 AAGCCCT
1 AAGCCCT
3152 AAGCCCT
1 AAGCCCT
3159 AAG-CCT
1 AAGCCCT
3165 AAGCCCT
1 AAGCCCT
3172 AAGCCCT
1 AAGCCCT
3179 AAGCCCT
1 AAGCCCT
3186 AAGCCCT
1 AAGCCCT
3193 AAG-CCT
1 AAGCCCT
3199 AAGCCCT
1 AAGCCCT
3206 AAGCCCT
1 AAGCCCT
3213 AAGCCCT
1 AAGCCCT
3220 AAGCCCT
1 AAGCCCT
3227 AAGCCCT
1 AAGCCCT
3234 AAGCCCT
1 AAGCCCT
3241 AAGCCCT
1 AAGCCCT
3248 AAGCCCT
1 AAGCCCT
3255 AAG-CCT
1 AAGCCCT
3261 AAGCCCT
1 AAGCCCT
3268 AAGCCCT
1 AAGCCCT
3275 AAGCCCT
1 AAGCCCT
3282 AAGCCCT
1 AAGCCCT
3289 AAG-CCT
1 AAGCCCT
3295 AAGCCCT
1 AAGCCCT
3302 AAGCCCT
1 AAGCCCT
3309 AAGCCCT
1 AAGCCCT
3316 AAGCCCT
1 AAGCCCT
3323 AAG-CCT
1 AAGCCCT
3329 AAGCCCT
1 AAGCCCT
3336 AAG-CCT
1 AAGCCCT
3342 AAGCCCT
1 AAGCCCT
3349 AAGCCCT
1 AAGCCCT
3356 AAGCCCT
1 AAGCCCT
3363 AAGCCCT
1 AAGCCCT
3370 AAGCCCT
1 AAGCCCT
3377 AAG-CCT
1 AAGCCCT
3383 AAGCCCT
1 AAGCCCT
3390 AAGCCCT
1 AAGCCCT
3397 AAGCCCT
1 AAGCCCT
3404 AAGCCCT
1 AAGCCCT
3411 AAGCCCT
1 AAGCCCT
3418 AAGCCCT
1 AAGCCCT
3425 AAG-CCT
1 AAGCCCT
3431 AAGCCCT
1 AAGCCCT
3438 AAG-CCT
1 AAGCCCT
3444 AAGCCCT
1 AAGCCCT
3451 AAGCCCT
1 AAGCCCT
3458 AAGCCCT
1 AAGCCCT
3465 AAGCCCT
1 AAGCCCT
3472 AAGCCCT
1 AAGCCCT
3479 AAGCCCT
1 AAGCCCT
3486 AAGCCCT
1 AAGCCCT
3493 AAGCCCT
1 AAGCCCT
3500 AAGCCCT
1 AAGCCCT
3507 AAGCCCT
1 AAGCCCT
3514 AAGCCCT
1 AAGCCCT
3521 AAGCCCT
1 AAGCCCT
3528 AAGCCCT
1 AAGCCCT
3535 AAGCCCT
1 AAGCCCT
3542 AAGCCCT
1 AAGCCCT
3549 AAGCCCT
1 AAGCCCT
3556 AAGCCCT
1 AAGCCCT
3563 AAGCCCT
1 AAGCCCT
3570 AAGCCCT
1 AAGCCCT
3577 AAGCCCT
1 AAGCCCT
3584 AAGCCCT
1 AAGCCCT
3591 AAGCCCT
1 AAGCCCT
3598 AAGCCCT
1 AAGCCCT
3605 AAGCCCT
1 AAGCCCT
3612 AAGCCCT
1 AAGCCCT
3619 AAGCCCT
1 AAGCCCT
3626 AAGCCCT
1 AAGCCCT
3633 AAGCCCT
1 AAGCCCT
3640 AAGCCCT
1 AAGCCCT
3647 AAGCCCT
1 AAGCCCT
3654 AAGCCCT
1 AAGCCCT
3661 AAGCCCT
1 AAGCCCT
3668 AAGCCCT
1 AAGCCCT
3675 AAGCCCT
1 AAGCCCT
3682 AAGCCCT
1 AAGCCCT
3689 AAGCCCT
1 AAGCCCT
3696 AAGCCCT
1 AAGCCCT
3703 AAGCCCT
1 AAGCCCT
3710 AAG-CCT
1 AAGCCCT
3716 AAGCCCT
1 AAGCCCT
3723 AAGCCCT
1 AAGCCCT
3730 AAGCCCT
1 AAGCCCT
3737 AAGCCCT
1 AAGCCCT
3744 AAGCCCT
1 AAGCCCT
3751 AAGCCCT
1 AAGCCCT
3758 AAGCCCT
1 AAGCCCT
3765 AAGCCCT
1 AAGCCCT
3772 AAGCCCT
1 AAGCCCT
3779 AAGCCCT
1 AAGCCCT
3786 AAGCCCT
1 AAGCCCT
3793 AAGCCCT
1 AAGCCCT
3800 AAG-CCT
1 AAGCCCT
3806 AAGCCCT
1 AAGCCCT
3813 AAGCCCT
1 AAGCCCT
3820 AAGCCCT
1 AAGCCCT
3827 AAGCCCT
1 AAGCCCT
3834 AAGCCCT
1 AAGCCCT
3841 AAGCCCT
1 AAGCCCT
3848 AAGCCCT
1 AAGCCCT
3855 AAG-CCT
1 AAGCCCT
3861 AAGCCCT
1 AAGCCCT
3868 AAGCCCT
1 AAGCCCT
3875 AAGCCCT
1 AAGCCCT
3882 AAGCCCT
1 AAGCCCT
3889 AAG-CCT
1 AAGCCCT
3895 AAGCCCT
1 AAGCCCT
3902 AAGCCCT
1 AAGCCCT
3909 AAGCCCT
1 AAGCCCT
3916 AAGCCCT
1 AAGCCCT
3923 AAGCCCT
1 AAGCCCT
3930 AAGCCCT
1 AAGCCCT
3937 AAGCCCT
1 AAGCCCT
3944 AAGCCCT
1 AAGCCCT
3951 AAGCCCT
1 AAGCCCT
3958 AAGCCCT
1 AAGCCCT
3965 AAGCCCT
1 AAGCCCT
3972 AAGCCCT
1 AAGCCCT
3979 AAGCCCT
1 AAGCCCT
3986 AAGCCCT
1 AAGCCCT
3993 AAGCCCT
1 AAGCCCT
4000 AAGCCCT
1 AAGCCCT
4007 AAGCCCT
1 AAGCCCT
4014 AAGCCCT
1 AAGCCCT
4021 AAGCCCT
1 AAGCCCT
4028 AAGCCCT
1 AAGCCCT
4035 AAGCCCT
1 AAGCCCT
4042 AAGCCCT
1 AAGCCCT
4049 AAGCCCT
1 AAGCCCT
4056 AAGCCCT
1 AAGCCCT
4063 AAGCCCT
1 AAGCCCT
4070 AAG-CCT
1 AAGCCCT
4076 AAGCCCT
1 AAGCCCT
4083 AAGCCCT
1 AAGCCCT
4090 AAGCCCT
1 AAGCCCT
4097 AAGCCCT
1 AAGCCCT
4104 AAGCCCT
1 AAGCCCT
4111 AAGCCCT
1 AAGCCCT
4118 AAGCCCT
1 AAGCCCT
4125 AAG-CCT
1 AAGCCCT
4131 AAGCCCT
1 AAGCCCT
4138 AAGCCCT
1 AAGCCCT
4145 AAGCCCT
1 AAGCCCT
4152 AAGCCCT
1 AAGCCCT
4159 AAGCCCT
1 AAGCCCT
4166 AAGCCCT
1 AAGCCCT
4173 AAGCCCT
1 AAGCCCT
4180 AAGCCCT
1 AAGCCCT
4187 AAGCCCT
1 AAGCCCT
4194 AAGCCCT
1 AAGCCCT
4201 AAGCCCT
1 AAGCCCT
4208 AAGCCCT
1 AAGCCCT
4215 AAGCCCT
1 AAGCCCT
4222 AAG-CCT
1 AAGCCCT
4228 AAGCCCT
1 AAGCCCT
4235 AAGCCCT
1 AAGCCCT
4242 AAGCCCT
1 AAGCCCT
4249 AAGCCCT
1 AAGCCCT
4256 AAGCCCT
1 AAGCCCT
4263 AAGCCCT
1 AAGCCCT
4270 AAGCCCT
1 AAGCCCT
4277 AAGCCCT
1 AAGCCCT
4284 AAGCCCT
1 AAGCCCT
4291 AAGCCCT
1 AAGCCCT
4298 AAG--CT
1 AAGCCCT
4303 AAG-CCT
1 AAGCCCT
4309 AAGCCCT
1 AAGCCCT
4316 AAGCCCT
1 AAGCCCT
4323 AAGCCCT
1 AAGCCCT
4330 AAGCCCT
1 AAGCCCT
4337 AAGCCCT
1 AAGCCCT
4344 AAGCCCT
1 AAGCCCT
4351 AAGCCCT
1 AAGCCCT
4358 AAGCCCT
1 AAGCCCT
4365 AAGCCCT
1 AAGCCCT
4372 AAGCCCT
1 AAGCCCT
4379 AAG-CCT
1 AAGCCCT
4385 AAGCCCT
1 AAGCCCT
4392 AAGCCCT
1 AAGCCCT
4399 AAGCCCT
1 AAGCCCT
4406 AAGCCCT
1 AAGCCCT
4413 AAGCCCT
1 AAGCCCT
4420 AAGCCCT
1 AAGCCCT
4427 AAGCCCT
1 AAGCCCT
4434 AAGCCCT
1 AAGCCCT
4441 AAGCCCT
1 AAGCCCT
4448 AAGCCCT
1 AAGCCCT
4455 AAG-CCT
1 AAGCCCT
4461 AAGCCCT
1 AAGCCCT
4468 AAG-CCT
1 AAGCCCT
4474 AAGCCCT
1 AAGCCCT
4481 AAGCCCT
1 AAGCCCT
4488 AAGCCCT
1 AAGCCCT
4495 AAGCCCT
1 AAGCCCT
4502 AAGCCCT
1 AAGCCCT
4509 AAGCCCT
1 AAGCCCT
4516 AAGCCCT
1 AAGCCCT
4523 AAGCCCT
1 AAGCCCT
4530 AAGCCCT
1 AAGCCCT
4537 AAGCCCT
1 AAGCCCT
4544 AAGCCCT
1 AAGCCCT
4551 AAGCCCT
1 AAGCCCT
4558 AAGCCCT
1 AAGCCCT
4565 AAGCCCT
1 AAGCCCT
4572 AAGCCCT
1 AAGCCCT
4579 AAG-CCT
1 AAGCCCT
4585 AAGCCCT
1 AAGCCCT
4592 AAGCCCT
1 AAGCCCT
4599 AAGCCCT
1 AAGCCCT
4606 AAGCCCT
1 AAGCCCT
4613 AAGCCCT
1 AAGCCCT
4620 AAGCCCT
1 AAGCCCT
4627 AAGCCCT
1 AAGCCCT
4634 AAGCCCT
1 AAGCCCT
4641 AAG-CCT
1 AAGCCCT
4647 AAGCCCT
1 AAGCCCT
4654 AAGCCCT
1 AAGCCCT
4661 AAGCCCT
1 AAGCCCT
4668 AAGCCCT
1 AAGCCCT
4675 AAGCCCT
1 AAGCCCT
4682 AAGCCCT
1 AAGCCCT
4689 AAGCCCT
1 AAGCCCT
4696 AAGCCCT
1 AAGCCCT
4703 AAGCCCT
1 AAGCCCT
4710 AAGCCCT
1 AAGCCCT
4717 AAGCCCT
1 AAGCCCT
4724 AAGCCCT
1 AAGCCCT
4731 AAGCCCT
1 AAGCCCT
4738 AAGCCCT
1 AAGCCCT
4745 AAGCCCT
1 AAGCCCT
4752 AAGCCCT
1 AAGCCCT
4759 AAGCCCT
1 AAGCCCT
4766 AAGCCCT
1 AAGCCCT
4773 AAGCCCT
1 AAGCCCT
4780 AAGCCCT
1 AAGCCCT
4787 AAGCCCT
1 AAGCCCT
4794 AAGCCCT
1 AAGCCCT
4801 AAGCCCT
1 AAGCCCT
4808 AAGCCCT
1 AAGCCCT
4815 AAGCCCT
1 AAGCCCT
4822 AAGCCCT
1 AAGCCCT
4829 AAG-CCT
1 AAGCCCT
4835 AAGCCCT
1 AAGCCCT
4842 AAGCCCT
1 AAGCCCT
4849 AAGCCCT
1 AAGCCCT
4856 AAGCCCT
1 AAGCCCT
4863 AAGCCCT
1 AAGCCCT
4870 AAGCCCT
1 AAGCCCT
4877 AAGCCCT
1 AAGCCCT
4884 AAGCCCT
1 AAGCCCT
4891 AAGCCCT
1 AAGCCCT
4898 AAGCCCT
1 AAGCCCT
4905 AAGCCCT
1 AAGCCCT
4912 AAGCCCT
1 AAGCCCT
4919 AAG-CCT
1 AAGCCCT
4925 AAGCCCT
1 AAGCCCT
4932 AAGCCCT
1 AAGCCCT
4939 AAGCCCT
1 AAGCCCT
4946 AAGCCCT
1 AAGCCCT
4953 AAGCCCT
1 AAGCCCT
4960 AAGCCCT
1 AAGCCCT
4967 AAGCCCT
1 AAGCCCT
4974 AAGCCCT
1 AAGCCCT
4981 AAGCCCT
1 AAGCCCT
4988 AAGCCCT
1 AAGCCCT
4995 AAGCCCT
1 AAGCCCT
5002 AAGCCCT
1 AAGCCCT
5009 AAGCCCT
1 AAGCCCT
5016 AAGCCCT
1 AAGCCCT
5023 AAGCCCT
1 AAGCCCT
5030 AAGCCCT
1 AAGCCCT
5037 AAG-CCT
1 AAGCCCT
5043 AAGCCCT
1 AAGCCCT
5050 AAGCCCT
1 AAGCCCT
5057 AAGCCCT
1 AAGCCCT
5064 AAGCCCT
1 AAGCCCT
5071 AAGCCCT
1 AAGCCCT
5078 AAGCCCT
1 AAGCCCT
5085 AAGCCCT
1 AAGCCCT
5092 AAGCCCT
1 AAGCCCT
5099 AAGCCCT
1 AAGCCCT
5106 AAGCCCT
1 AAGCCCT
5113 AAGCCCT
1 AAGCCCT
5120 AAGCCCT
1 AAGCCCT
5127 AAGCCCT
1 AAGCCCT
5134 AAGCCCT
1 AAGCCCT
5141 AAGCCCT
1 AAGCCCT
5148 AAGCCCT
1 AAGCCCT
5155 AAGCCCT
1 AAGCCCT
5162 AAGCCCT
1 AAGCCCT
5169 AAGCCCT
1 AAGCCCT
5176 AAGCCCT
1 AAGCCCT
5183 AAGCCCT
1 AAGCCCT
5190 AAGCCCT
1 AAGCCCT
5197 AAGCCCT
1 AAGCCCT
5204 AAG-CCT
1 AAGCCCT
5210 AAGCCCT
1 AAGCCCT
5217 AAGCCCT
1 AAGCCCT
5224 AAGCCCT
1 AAGCCCT
5231 AAGCCCT
1 AAGCCCT
5238 AAGCCCT
1 AAGCCCT
5245 AAGCCCT
1 AAGCCCT
5252 AAGCCCT
1 AAGCCCT
5259 AAGCCCT
1 AAGCCCT
5266 AAGCCCT
1 AAGCCCT
5273 AAGCCCT
1 AAGCCCT
5280 AAGCCCT
1 AAGCCCT
5287 AAGCCCT
1 AAGCCCT
5294 AAGCCCT
1 AAGCCCT
5301 AAGCCCT
1 AAGCCCT
5308 AAGCCCT
1 AAGCCCT
5315 AAGCCCT
1 AAGCCCT
5322 AAGCCCT
1 AAGCCCT
5329 AAGCCCT
1 AAGCCCT
5336 AAGCCCT
1 AAGCCCT
5343 AAGCCCT
1 AAGCCCT
5350 AAGCCCT
1 AAGCCCT
5357 AAGCCCT
1 AAGCCCT
5364 AAGCCCT
1 AAGCCCT
5371 AAG-CCT
1 AAGCCCT
5377 AAGCCCT
1 AAGCCCT
5384 AAGCCCT
1 AAGCCCT
5391 AAGCCCT
1 AAGCCCT
5398 AAGCCCT
1 AAGCCCT
5405 AAGCCCT
1 AAGCCCT
5412 AAGCCCT
1 AAGCCCT
5419 AAGCCCT
1 AAGCCCT
5426 AAGCCCT
1 AAGCCCT
5433 AAGCCCT
1 AAGCCCT
5440 AAGCCCT
1 AAGCCCT
5447 AAGCCCT
1 AAGCCCT
5454 AAGCCCT
1 AAGCCCT
5461 AAGCCCT
1 AAGCCCT
5468 AAGCCCT
1 AAGCCCT
5475 AAGCCCT
1 AAGCCCT
5482 AAGCCCT
1 AAGCCCT
5489 AAGCCCT
1 AAGCCCT
5496 AAGCCCT
1 AAGCCCT
5503 AAGCCCT
1 AAGCCCT
5510 AAGCCCT
1 AAGCCCT
5517 AAGCCCT
1 AAGCCCT
5524 AAGCCCT
1 AAGCCCT
5531 AAGCCCT
1 AAGCCCT
5538 AAGCCCT
1 AAGCCCT
5545 AAGCCCT
1 AAGCCCT
5552 AAGCCCT
1 AAGCCCT
5559 AAGCCCT
1 AAGCCCT
5566 AAGCCCT
1 AAGCCCT
5573 AAGCCCT
1 AAGCCCT
5580 AAGCCCT
1 AAGCCCT
5587 AAGCCCT
1 AAGCCCT
5594 AAGCCCT
1 AAGCCCT
5601 AAGCCCT
1 AAGCCCT
5608 AAGCCCT
1 AAGCCCT
5615 AAGCCCT
1 AAGCCCT
5622 AAGCCCT
1 AAGCCCT
5629 AAGCCCT
1 AAGCCCT
5636 AAGCCCT
1 AAGCCCT
5643 AAG-CCT
1 AAGCCCT
5649 AAGCCCT
1 AAGCCCT
5656 AAGCCCT
1 AAGCCCT
5663 AAGCCCT
1 AAGCCCT
5670 AAGCCCT
1 AAGCCCT
5677 AAGCCCT
1 AAGCCCT
5684 AAGCCCT
1 AAGCCCT
5691 AAGCCCT
1 AAGCCCT
5698 AAGCCCT
1 AAGCCCT
5705 AAGCCCT
1 AAGCCCT
5712 AAGCCCT
1 AAGCCCT
5719 AAGCCCT
1 AAGCCCT
5726 AAGCCCT
1 AAGCCCT
5733 AAGCCCT
1 AAGCCCT
5740 AAGCCCT
1 AAGCCCT
5747 AAGCCCT
1 AAGCCCT
5754 AAGCCCT
1 AAGCCCT
5761 AAGCCCT
1 AAGCCCT
5768 AAGCCCT
1 AAGCCCT
5775 AAGCCCT
1 AAGCCCT
5782 AAGCCCT
1 AAGCCCT
5789 AAGCCCT
1 AAGCCCT
5796 AAGCCCT
1 AAGCCCT
5803 AAGCCCT
1 AAGCCCT
5810 AAGCCCT
1 AAGCCCT
5817 AAGCCCT
1 AAGCCCT
5824 AAGCCCT
1 AAGCCCT
5831 AAGCCCT
1 AAGCCCT
5838 AAGCCCT
1 AAGCCCT
5845 AAGCCCT
1 AAGCCCT
5852 AAGCCCT
1 AAGCCCT
5859 AAGCCCT
1 AAGCCCT
5866 AAGCCCT
1 AAGCCCT
5873 AAGCCCT
1 AAGCCCT
5880 AAGCCCT
1 AAGCCCT
5887 AAGCCCT
1 AAGCCCT
5894 AAGCCCT
1 AAGCCCT
5901 AAGCCCT
1 AAGCCCT
5908 AAGCCCT
1 AAGCCCT
5915 AAGCCCT
1 AAGCCCT
5922 AAGCCCT
1 AAGCCCT
5929 AAGCCCT
1 AAGCCCT
5936 AAG-CCT
1 AAGCCCT
5942 AAGCCCT
1 AAGCCCT
5949 AAGCCCT
1 AAGCCCT
5956 AAGCCCT
1 AAGCCCT
5963 AAGCCCT
1 AAGCCCT
*
5970 AAACCCT
1 AAGCCCT
5977 AAG-CCT
1 AAGCCCT
*
5983 AAACCCT
1 AAGCCCT
*
5990 AAACCCT
1 AAGCCCT
*
5997 AAACCCT
1 AAGCCCT
*
6004 AAACCCT
1 AAGCCCT
*
6011 AAACCCT
1 AAGCCCT
*
6018 AAACCCT
1 AAGCCCT
*
6025 AAACCCT
1 AAGCCCT
*
6032 AAACCCT
1 AAGCCCT
*
6039 AAACCCT
1 AAGCCCT
*
6046 AAACCCT
1 AAGCCCT
*
6053 AAACCCT
1 AAGCCCT
*
6060 AAACCCT
1 AAGCCCT
*
6067 AAACCCT
1 AAGCCCT
*
6074 AAACCCT
1 AAGCCCT
*
6081 AAACCCT
1 AAGCCCT
*
6088 AAACCCT
1 AAGCCCT
*
6095 AAACCCT
1 AAGCCCT
*
6102 AAACCCT
1 AAGCCCT
*
6109 AAACCCT
1 AAGCCCT
*
6116 AAACCCT
1 AAGCCCT
*
6123 AAACCCT
1 AAGCCCT
*
6130 AAACCCT
1 AAGCCCT
*
6137 AAACCCT
1 AAGCCCT
*
6144 AAACCCT
1 AAGCCCT
*
6151 AAACCCT
1 AAGCCCT
*
6158 AAACCCT
1 AAGCCCT
*
6165 AAACCCT
1 AAGCCCT
*
6172 AAACCCT
1 AAGCCCT
*
6179 AAACCCT
1 AAGCCCT
*
6186 AA-ACCT
1 AAGCCCT
*
6192 AAACCCT
1 AAGCCCT
*
6199 AAACCCT
1 AAGCCCT
*
6206 AAACCCT
1 AAGCCCT
*
6213 AAACCCT
1 AAGCCCT
*
6220 AAACCCT
1 AAGCCCT
*
6227 AAACCCT
1 AAGCCCT
*
6234 AAACCCT
1 AAGCCCT
*
6241 AAACCCT
1 AAGCCCT
*
6248 AAACCCT
1 AAGCCCT
*
6255 AAACCCT
1 AAGCCCT
*
6262 AAACCCT
1 AAGCCCT
*
6269 AAACCCT
1 AAGCCCT
*
6276 AAACCCT
1 AAGCCCT
*
6283 AAACCCT
1 AAGCCCT
*
6290 AAACCCT
1 AAGCCCT
*
6297 AAACCCT
1 AAGCCCT
*
6304 AAACCCT
1 AAGCCCT
*
6311 AAACCCT
1 AAGCCCT
*
6318 AAACCCT
1 AAGCCCT
*
6325 AAACCCT
1 AAGCCCT
*
6332 AAACCCT
1 AAGCCCT
*
6339 AAACCCT
1 AAGCCCT
*
6346 AAACCCT
1 AAGCCCT
*
6353 AAACCCT
1 AAGCCCT
*
6360 AAACCCT
1 AAGCCCT
*
6367 AAACCCT
1 AAGCCCT
*
6374 AAACCCT
1 AAGCCCT
*
6381 AAACCCT
1 AAGCCCT
*
6388 AAACCCT
1 AAGCCCT
*
6395 AAACCCT
1 AAGCCCT
*
6402 AAACCCT
1 AAGCCCT
*
6409 AAACCCT
1 AAGCCCT
*
6416 AAACCCT
1 AAGCCCT
*
6423 AAACCCT
1 AAGCCCT
*
6430 AAACCCT
1 AAGCCCT
*
6437 AAACCCT
1 AAGCCCT
*
6444 AAACCCT
1 AAGCCCT
*
6451 AAACCCT
1 AAGCCCT
*
6458 AAACCCT
1 AAGCCCT
*
6465 AAACCCT
1 AAGCCCT
*
6472 AAACCCT
1 AAGCCCT
*
6479 AAACCCT
1 AAGCCCT
*
6486 AAACCCT
1 AAGCCCT
*
6493 AAACCCT
1 AAGCCCT
*
6500 AAACCCT
1 AAGCCCT
*
6507 AAACCCT
1 AAGCCCT
*
6514 AAACCCT
1 AAGCCCT
*
6521 AAACCCT
1 AAGCCCT
*
6528 AAACCCT
1 AAGCCCT
*
6535 AAACCCT
1 AAGCCCT
*
6542 AAACCCT
1 AAGCCCT
*
6549 AAACCCT
1 AAGCCCT
*
6556 AAACCCT
1 AAGCCCT
*
6563 AAACCCT
1 AAGCCCT
*
6570 AAACCCT
1 AAGCCCT
*
6577 AAACCCT
1 AAGCCCT
*
6584 AAACCCT
1 AAGCCCT
*
6591 AAACCCT
1 AAGCCCT
*
6598 AAACCCT
1 AAGCCCT
*
6605 AAACCCT
1 AAGCCCT
*
6612 AAACCCT
1 AAGCCCT
*
6619 AAACCCT
1 AAGCCCT
*
6626 AAACCCT
1 AAGCCCT
*
6633 AAACCCT
1 AAGCCCT
*
6640 AAACCCT
1 AAGCCCT
*
6647 AAACCCT
1 AAGCCCT
*
6654 AAACCCT
1 AAGCCCT
*
6661 AAACCCT
1 AAGCCCT
*
6668 AAACCCT
1 AAGCCCT
*
6675 AAACCCT
1 AAGCCCT
*
6682 AAACCCT
1 AAGCCCT
*
6689 AAACCCT
1 AAGCCCT
*
6696 AAACCCT
1 AAGCCCT
*
6703 AAACCCT
1 AAGCCCT
*
6710 AAACCCT
1 AAGCCCT
*
6717 AAACCCT
1 AAGCCCT
*
6724 AAACCCT
1 AAGCCCT
*
6731 AAACCCT
1 AAGCCCT
*
6738 AAACCCT
1 AAGCCCT
*
6745 AAACCCT
1 AAGCCCT
*
6752 AAACCCT
1 AAGCCCT
*
6759 AAACCCT
1 AAGCCCT
*
6766 AAACCCT
1 AAGCCCT
*
6773 AAACCCT
1 AAGCCCT
*
6780 AAACCCT
1 AAGCCCT
*
6787 AAACCCT
1 AAGCCCT
*
6794 AAACCCT
1 AAGCCCT
*
6801 AAACCCT
1 AAGCCCT
*
6808 AAACCCT
1 AAGCCCT
*
6815 AAACCCT
1 AAGCCCT
*
6822 AAACCC-
1 AAGCCCT
6828 AAGCCC-
1 AAGCCCT
*
6834 AAGCCCC
1 AAGCCCT
6841 AAGCCC-
1 AAGCCCT
*
6847 AAGCCCC
1 AAGCCCT
6854 AAGCCC-
1 AAGCCCT
6860 AAGCCC-
1 AAGCCCT
*
6866 AAGCCCC
1 AAGCCCT
*
6873 AAGCCCC
1 AAGCCCT
*
6880 AAGCCCC
1 AAGCCCT
*
6887 AAGCCCC
1 AAGCCCT
6894 AAGCCC-
1 AAGCCCT
*
6900 AAGCCCC
1 AAGCCCT
*
6907 AAGCCCC
1 AAGCCCT
*
6914 AAGCCCC
1 AAGCCCT
*
6921 AAGCCCC
1 AAGCCCT
*
6928 AAGCCCC
1 AAGCCCT
*
6935 AAGCCCC
1 AAGCCCT
*
6942 AAGCCCC
1 AAGCCCT
*
6949 AAGCCCC
1 AAGCCCT
*
6956 AAGCCCC
1 AAGCCCT
*
6963 AAGCCCC
1 AAGCCCT
*
6970 AAGCCCC
1 AAGCCCT
*
6977 AAGCCCC
1 AAGCCCT
*
6984 AAGCCCC
1 AAGCCCT
*
6991 AAGCCCC
1 AAGCCCT
6998 AAGCCC-
1 AAGCCCT
*
7004 AAGCCCC
1 AAGCCCT
*
7011 AAGCCCC
1 AAGCCCT
*
7018 AAGCCCC
1 AAGCCCT
*
7025 AAGCCCC
1 AAGCCCT
*
7032 AAGCCCC
1 AAGCCCT
*
7039 AAGCCCC
1 AAGCCCT
*
7046 AAGCCCC
1 AAGCCCT
*
7053 AAGCCCC
1 AAGCCCT
*
7060 AAGCCCC
1 AAGCCCT
*
7067 AAGCCCC
1 AAGCCCT
*
7074 AAGCCCC
1 AAGCCCT
*
7081 AAGCCCC
1 AAGCCCT
*
7088 AAGCCCC
1 AAGCCCT
*
7095 AAGCCCC
1 AAGCCCT
*
7102 AAGCCCC
1 AAGCCCT
*
7109 AAGCCCC
1 AAGCCCT
*
7116 AAGCCCC
1 AAGCCCT
7123 AAGCCC-
1 AAGCCCT
*
7129 AAGCCCC
1 AAGCCCT
*
7136 AAGCCCC
1 AAGCCCT
*
7143 AAGCCCC
1 AAGCCCT
*
7150 AAGCCCC
1 AAGCCCT
*
7157 AAGCCCC
1 AAGCCCT
*
7164 AAGCCCC
1 AAGCCCT
*
7171 AAGCCCC
1 AAGCCCT
*
7178 AAGCCCC
1 AAGCCCT
7185 AAGCCC-
1 AAGCCCT
*
7191 AAGCCCC
1 AAGCCCT
*
7198 AAGCCCC
1 AAGCCCT
*
7205 AAGCCCC
1 AAGCCCT
*
7212 AAGCCCC
1 AAGCCCT
*
7219 AAGCCCC
1 AAGCCCT
*
7226 AAGCCCC
1 AAGCCCT
*
7233 AAGCCCC
1 AAGCCCT
*
7240 AAGCCCC
1 AAGCCCT
*
7247 AAGCCCC
1 AAGCCCT
*
7254 AAGCCCC
1 AAGCCCT
*
7261 AAGCCCC
1 AAGCCCT
*
7268 AAGCCCC
1 AAGCCCT
*
7275 AAGCCCC
1 AAGCCCT
*
7282 AAGCCCC
1 AAGCCCT
*
7289 AAGCCCC
1 AAGCCCT
*
7296 AAGCCCC
1 AAGCCCT
*
7303 AAGCCCC
1 AAGCCCT
*
7310 AAGCCCC
1 AAGCCCT
*
7317 AAGCCCC
1 AAGCCCT
*
7324 AAGCCCC
1 AAGCCCT
*
7331 AAGCCCC
1 AAGCCCT
*
7338 AAGCCCC
1 AAGCCCT
*
7345 AAGCCCC
1 AAGCCCT
*
7352 AAGCCCC
1 AAGCCCT
*
7359 AAGCCCC
1 AAGCCCT
*
7366 AAGCCCC
1 AAGCCCT
*
7373 AAGCCCC
1 AAGCCCT
7380 AAGCCC-
1 AAGCCCT
*
7386 AAGCCCC
1 AAGCCCT
*
7393 AAGCCCC
1 AAGCCCT
*
7400 AAGCCCC
1 AAGCCCT
*
7407 AAGCCCC
1 AAGCCCT
*
7414 AAGCCCC
1 AAGCCCT
*
7421 AAGCCCC
1 AAGCCCT
*
7428 AAGCCCC
1 AAGCCCT
*
7435 AAGCCCC
1 AAGCCCT
*
7442 AAGCCCC
1 AAGCCCT
*
7449 AAGCCCC
1 AAGCCCT
*
7456 AAGCCCC
1 AAGCCCT
*
7463 AAGCCCC
1 AAGCCCT
*
7470 AAGCCCC
1 AAGCCCT
*
7477 AAGCCCC
1 AAGCCCT
*
7484 AAGCCCC
1 AAGCCCT
*
7491 AAGCCCC
1 AAGCCCT
*
7498 AAGCCCC
1 AAGCCCT
*
7505 AAGCCCC
1 AAGCCCT
*
7512 AAGCCCC
1 AAGCCCT
*
7519 AAGCCCC
1 AAGCCCT
*
7526 AAGCCCC
1 AAGCCCT
*
7533 AAGCCCC
1 AAGCCCT
*
7540 AAGCCCC
1 AAGCCCT
*
7547 AAGCCCC
1 AAGCCCT
*
7554 AAGCCCC
1 AAGCCCT
*
7561 AAGCCCC
1 AAGCCCT
*
7568 AAGCCCC
1 AAGCCCT
*
7575 AAGCCCC
1 AAGCCCT
*
7582 AAGCCCC
1 AAGCCCT
*
7589 AAGCCCC
1 AAGCCCT
*
7596 AAGCCCC
1 AAGCCCT
*
7603 AAGCCCC
1 AAGCCCT
7610 AAGCCC-
1 AAGCCCT
*
7616 AAGCCCC
1 AAGCCCT
*
7623 AAGCCCC
1 AAGCCCT
*
7630 AAGCCCC
1 AAGCCCT
7637 AAGCCC-
1 AAGCCCT
7643 AAGCCC-
1 AAGCCCT
*
7649 AAGCCCC
1 AAGCCCT
7656 AAGCCC-
1 AAGCCCT
*
7662 AAGCCCC
1 AAGCCCT
*
7669 AAGCCCC
1 AAGCCCT
*
7676 AAGCCCC
1 AAGCCCT
*
7683 AAGCCCC
1 AAGCCCT
*
7690 AAGCCCC
1 AAGCCCT
*
7697 AAGCCCC
1 AAGCCCT
*
7704 AAGCCCC
1 AAGCCCT
*
7711 AAGCCCC
1 AAGCCCT
*
7718 AAGCCCC
1 AAGCCCT
*
7725 AAGCCCC
1 AAGCCCT
*
7732 AAGCCCC
1 AAGCCCT
*
7739 AAGCCCC
1 AAGCCCT
*
7746 AAGCCCC
1 AAGCCCT
*
7753 AAGCCCC
1 AAGCCCT
*
7760 AAGCCCC
1 AAGCCCT
*
7767 AAGCCCC
1 AAGCCCT
*
7774 AAGCCCC
1 AAGCCCT
*
7781 AAGCCCC
1 AAGCCCT
*
7788 AAGCCCC
1 AAGCCCT
*
7795 AAGCCCC
1 AAGCCCT
*
7802 AAGCCCC
1 AAGCCCT
*
7809 AAGCCCC
1 AAGCCCT
*
7816 AAGCCCC
1 AAGCCCT
*
7823 AAGCCCC
1 AAGCCCT
*
7830 AAGCCCC
1 AAGCCCT
*
7837 AAGCCCC
1 AAGCCCT
*
7844 AAGCCCC
1 AAGCCCT
*
7851 AAGCCCC
1 AAGCCCT
*
7858 AAGCCCC
1 AAGCCCT
*
7865 AAGCCCC
1 AAGCCCT
*
7872 AAGCCCC
1 AAGCCCT
*
7879 AAGCCCC
1 AAGCCCT
7886 AAGCCC-
1 AAGCCCT
*
7892 AAGCCCC
1 AAGCCCT
*
7899 AAGCCCC
1 AAGCCCT
*
7906 AAGCCCC
1 AAGCCCT
*
7913 AAGCCCC
1 AAGCCCT
*
7920 AAGCCCC
1 AAGCCCT
*
7927 AAGCCCC
1 AAGCCCT
*
7934 AAGCCCC
1 AAGCCCT
7941 AAGCCC-
1 AAGCCCT
*
7947 AAGCCCC
1 AAGCCCT
7954 AAGCCC-
1 AAGCCCT
*
7960 AAGCCCC
1 AAGCCCT
*
7967 AAGCCCC
1 AAGCCCT
*
7974 AAGCCCC
1 AAGCCCT
*
7981 AAGCCCC
1 AAGCCCT
*
7988 AAGCCCC
1 AAGCCCT
7995 AAGCCC-
1 AAGCCCT
*
8001 AAGCCCC
1 AAGCCCT
*
8008 AAGCCCC
1 AAGCCCT
*
8015 AAGCCCC
1 AAGCCCT
*
8022 AAGCCCC
1 AAGCCCT
*
8029 AAGCCCC
1 AAGCCCT
*
8036 AAGCCCC
1 AAGCCCT
*
8043 AAGCCCC
1 AAGCCCT
*
8050 AAGCCCC
1 AAGCCCT
*
8057 AAGCCCC
1 AAGCCCT
*
8064 AAGCCCC
1 AAGCCCT
8071 AAGCCC-
1 AAGCCCT
*
8077 AAGCCCC
1 AAGCCCT
*
8084 AAGCCCC
1 AAGCCCT
*
8091 AAGCCCC
1 AAGCCCT
*
8098 AAGCCCC
1 AAGCCCT
*
8105 AAGCCCC
1 AAGCCCT
*
8112 AAGCCCC
1 AAGCCCT
*
8119 AAGCCCC
1 AAGCCCT
*
8126 AAGCCCC
1 AAGCCCT
*
8133 AAGCCCC
1 AAGCCCT
*
8140 AAGCCCC
1 AAGCCCT
*
8147 AAGCCCC
1 AAGCCCT
*
8154 AAGCCCC
1 AAGCCCT
*
8161 AAGCCCC
1 AAGCCCT
*
8168 AAGCCCC
1 AAGCCCT
*
8175 AAGCCCC
1 AAGCCCT
*
8182 AAGCCCC
1 AAGCCCT
*
8189 AAGCCCC
1 AAGCCCT
*
8196 AAGCCCC
1 AAGCCCT
8203 AAGCCCT
1 AAGCCCT
8210 CTTGAATGTG
Statistics
Matches: 8013, Mismatches: 33, Indels: 312
0.96 0.00 0.04
Matches are distributed among these distances:
5 46 0.01
6 897 0.11
7 6987 0.87
8 63 0.01
9 20 0.00
ACGTcount: A:0.31, C:0.45, G:0.12, T:0.12
Consensus pattern (7 bp):
AAGCCCT
Found at i:14410 original size:18 final size:19
Alignment explanation
Indices: 14366--14402 Score: 56
Period size: 19 Copynumber: 1.9 Consensus size: 19
14356 GCTCGCCCCG
*
14366 TCCCCGAACCCGAAATGAA
1 TCCCCGACCCCGAAATGAA
*
14385 TCCCCGACCCCGATATGA
1 TCCCCGACCCCGAAATGA
14403 TCCTCGACAG
Statistics
Matches: 16, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
19 16 1.00
ACGTcount: A:0.30, C:0.41, G:0.16, T:0.14
Consensus pattern (19 bp):
TCCCCGACCCCGAAATGAA
Found at i:14525 original size:25 final size:25
Alignment explanation
Indices: 14497--14561 Score: 69
Period size: 25 Copynumber: 2.6 Consensus size: 25
14487 AATATTTTAT
14497 ATATAAT-TAATATAAAAAATATAAA
1 ATATAATAT-ATATAAAAAATATAAA
* **
14522 ATATTATATATATAATTAATATAAA
1 ATATAATATATATAAAAAATATAAA
* *
14547 AAATTATATATATAA
1 ATATAATATATATAA
14562 TCGGGGCGGG
Statistics
Matches: 35, Mismatches: 4, Indels: 2
0.85 0.10 0.05
Matches are distributed among these distances:
25 34 0.97
26 1 0.03
ACGTcount: A:0.62, C:0.00, G:0.00, T:0.38
Consensus pattern (25 bp):
ATATAATATATATAAAAAATATAAA
Found at i:14532 original size:34 final size:34
Alignment explanation
Indices: 14484--14550 Score: 125
Period size: 34 Copynumber: 2.0 Consensus size: 34
14474 ACCCAAACCC
*
14484 TAAAATATTTTATATATAATTAATATAAAAAATA
1 TAAAATATTATATATATAATTAATATAAAAAATA
14518 TAAAATATTATATATATAATTAATATAAAAAAT
1 TAAAATATTATATATATAATTAATATAAAAAAT
14551 TATATATATA
Statistics
Matches: 32, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
34 32 1.00
ACGTcount: A:0.60, C:0.00, G:0.00, T:0.40
Consensus pattern (34 bp):
TAAAATATTATATATATAATTAATATAAAAAATA
Found at i:14562 original size:25 final size:25
Alignment explanation
Indices: 14514--14562 Score: 89
Period size: 25 Copynumber: 2.0 Consensus size: 25
14504 TAATATAAAA
*
14514 AATATAAAATATTATATATATAATT
1 AATATAAAAAATTATATATATAATT
14539 AATATAAAAAATTATATATATAAT
1 AATATAAAAAATTATATATATAAT
14563 CGGGGCGGGG
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
25 23 1.00
ACGTcount: A:0.59, C:0.00, G:0.00, T:0.41
Consensus pattern (25 bp):
AATATAAAAAATTATATATATAATT
Found at i:16360 original size:2 final size:2
Alignment explanation
Indices: 16353--16381 Score: 58
Period size: 2 Copynumber: 14.5 Consensus size: 2
16343 GTGCAGTGCT
16353 TA TA TA TA TA TA TA TA TA TA TA TA TA TA T
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA T
16382 TAGAATTAAT
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 27 1.00
ACGTcount: A:0.48, C:0.00, G:0.00, T:0.52
Consensus pattern (2 bp):
TA
Found at i:16508 original size:315 final size:309
Alignment explanation
Indices: 15942--16569 Score: 1202
Period size: 315 Copynumber: 2.0 Consensus size: 309
15932 AACAATTGCC
15942 TTACTCCCTCTTCTTACTTTTCACAGGATTTAAAAATAAGGATAATCAAATGAACTGCTTAGATT
1 TTACTCCCTCTTCTTACTTTTCACAGGATTTAAAAATAAGGATAATCAAATGAACTGCTTAGATT
16007 CTCATTTTATTCTAACAGTGATCTGTTGTGCAGTGCTTATATATATATATATATATATATTAGAA
66 CTCATTTTATTCTAACAGTGATCTGTTGTGCAGTGCTTATATATATATATATATATATATTAGAA
16072 TTAATGTATTCACTTAAAGGAAATTTTTATTGAAAAATTGAATCTCCCAAATGTTTATTTGATAG
131 TTAATGTATTCACTTAAAGGAAATTTTTATTGAAAAATTGAATCTCCCAAATGTTTATTTGATAG
16137 CAGTTAAGGTCAAGCCAAGAGTTTTCACTACAATCCCCCCTCTTTTGCAGCCCATGCTTTGTGTC
196 CAGTTAAGGTCAAGCCAAGAGTTTTCACTACAATCCCCCCTCTTTTGCAGCCCATGCTTTGTGTC
16202 AGTGCAGTTAATCCCTTCCTGTTTTCAAAGGTTCCAGCTTTGAACCATG
261 AGTGCAGTTAATCCCTTCCTGTTTTCAAAGGTTCCAGCTTTGAACCATG
16251 TTACTCCCTCTTCTTACTTTTCACAGGATTTAAAAATAAGGATAATCAAATGAACTGCTTAGATT
1 TTACTCCCTCTTCTTACTTTTCACAGGATTTAAAAATAAGGATAATCAAATGAACTGCTTAGATT
16316 CTCATTTTATTCTAACAGTGATCTGTTGTGCAGTGCTTATATATATATATATATATATATATATA
66 CTCATTTTATTCTAACAGTGATCTGTTGTGCAGTGC-----T-TATATATATATATATATATATA
16381 TTAGAATTAATGTATTCACTTAAAGGAAATTTTTATTGAAAAATTGAATCTCCCAAATGTTTATT
125 TTAGAATTAATGTATTCACTTAAAGGAAATTTTTATTGAAAAATTGAATCTCCCAAATGTTTATT
16446 TGATAGCAGTTAAGGTCAAGCCAAGAGTTTTCACTACAATCCCCCCTCTTTTGCAGCCCATGCTT
190 TGATAGCAGTTAAGGTCAAGCCAAGAGTTTTCACTACAATCCCCCCTCTTTTGCAGCCCATGCTT
16511 TGTGTCAGTGCAGTTAATCCCTTCCTGTTTTCAAAGGTTCCAGCTTTGAACCATG
255 TGTGTCAGTGCAGTTAATCCCTTCCTGTTTTCAAAGGTTCCAGCTTTGAACCATG
16566 TTAC
1 TTAC
16570 GGGCATCAGA
Statistics
Matches: 313, Mismatches: 0, Indels: 6
0.98 0.00 0.02
Matches are distributed among these distances:
309 101 0.32
314 1 0.00
315 211 0.67
ACGTcount: A:0.30, C:0.18, G:0.14, T:0.38
Consensus pattern (309 bp):
TTACTCCCTCTTCTTACTTTTCACAGGATTTAAAAATAAGGATAATCAAATGAACTGCTTAGATT
CTCATTTTATTCTAACAGTGATCTGTTGTGCAGTGCTTATATATATATATATATATATATTAGAA
TTAATGTATTCACTTAAAGGAAATTTTTATTGAAAAATTGAATCTCCCAAATGTTTATTTGATAG
CAGTTAAGGTCAAGCCAAGAGTTTTCACTACAATCCCCCCTCTTTTGCAGCCCATGCTTTGTGTC
AGTGCAGTTAATCCCTTCCTGTTTTCAAAGGTTCCAGCTTTGAACCATG
Found at i:31225 original size:36 final size:36
Alignment explanation
Indices: 31178--31294 Score: 198
Period size: 36 Copynumber: 3.2 Consensus size: 36
31168 TCCTTGGCGG
*
31178 GGAGATGAAGGGTGAAGAATTGGTAATCCATGGTGA
1 GGAGATGAAGGGTGAAGAATTCGTAATCCATGGTGA
* *
31214 GGAGATGAAGGGTGAAGAATTCGAAATCCATGATGA
1 GGAGATGAAGGGTGAAGAATTCGTAATCCATGGTGA
*
31250 GGAGATGAAGGGTGAAGAATTCGTAATCCATGGCGA
1 GGAGATGAAGGGTGAAGAATTCGTAATCCATGGTGA
31286 GGAGATGAA
1 GGAGATGAA
31295 AGGTAATCCA
Statistics
Matches: 75, Mismatches: 6, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
36 75 1.00
ACGTcount: A:0.36, C:0.08, G:0.37, T:0.20
Consensus pattern (36 bp):
GGAGATGAAGGGTGAAGAATTCGTAATCCATGGTGA
Found at i:35617 original size:21 final size:21
Alignment explanation
Indices: 35591--35651 Score: 77
Period size: 21 Copynumber: 2.9 Consensus size: 21
35581 TTGAGGGTTA
*
35591 TATGTGGTCATTCGGGACATC
1 TATGTGGTCATTCGAGACATC
*
35612 TATGTGGTCATTTGAGACATC
1 TATGTGGTCATTCGAGACATC
* * *
35633 TATATGGTTATTCAAGACA
1 TATGTGGTCATTCGAGACA
35652 AATTTTACAT
Statistics
Matches: 34, Mismatches: 6, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
21 34 1.00
ACGTcount: A:0.26, C:0.15, G:0.23, T:0.36
Consensus pattern (21 bp):
TATGTGGTCATTCGAGACATC
Found at i:37337 original size:21 final size:22
Alignment explanation
Indices: 37313--37369 Score: 80
Period size: 21 Copynumber: 2.5 Consensus size: 22
37303 ATATTTTATA
37313 TATATTAACTTTAAA-ATAATT
1 TATATTAACTTTAAATATAATT
37334 TATATTAACTTATTAAATATAATT
1 TATATTAAC-T-TTAAATATAATT
37358 TATTATTAACTT
1 TA-TATTAACTT
37370 ATTTTTAAAA
Statistics
Matches: 32, Mismatches: 0, Indels: 6
0.84 0.00 0.16
Matches are distributed among these distances:
21 9 0.28
22 1 0.03
23 6 0.19
24 9 0.28
25 7 0.22
ACGTcount: A:0.44, C:0.05, G:0.00, T:0.51
Consensus pattern (22 bp):
TATATTAACTTTAAATATAATT
Found at i:37370 original size:25 final size:23
Alignment explanation
Indices: 37313--37372 Score: 88
Period size: 25 Copynumber: 2.6 Consensus size: 23
37303 ATATTTTATA
37313 TATATTAAC-T-TTAAAATAATT
1 TATATTAACTTATTAAAATAATT
37334 TATATTAACTTATTAAATATAATT
1 TATATTAACTTATTAAA-ATAATT
37358 TATTATTAACTTATT
1 TA-TATTAACTTATT
37373 TTTAAAAATA
Statistics
Matches: 35, Mismatches: 0, Indels: 4
0.90 0.00 0.10
Matches are distributed among these distances:
21 9 0.26
22 1 0.03
23 5 0.14
24 8 0.23
25 12 0.34
ACGTcount: A:0.43, C:0.05, G:0.00, T:0.52
Consensus pattern (23 bp):
TATATTAACTTATTAAAATAATT
Found at i:37424 original size:19 final size:20
Alignment explanation
Indices: 37386--37427 Score: 61
Period size: 19 Copynumber: 2.1 Consensus size: 20
37376 AAAAATATTT
37386 TATATTTTCATTTAAAAATA
1 TATATTTTCATTTAAAAATA
37406 TATATTTT-ATGTT-AAAATA
1 TATATTTTCAT-TTAAAAATA
37425 TAT
1 TAT
37428 TCAAAAAAAT
Statistics
Matches: 21, Mismatches: 0, Indels: 3
0.88 0.00 0.12
Matches are distributed among these distances:
19 11 0.52
20 10 0.48
ACGTcount: A:0.43, C:0.02, G:0.02, T:0.52
Consensus pattern (20 bp):
TATATTTTCATTTAAAAATA
Found at i:48824 original size:24 final size:24
Alignment explanation
Indices: 48792--48840 Score: 89
Period size: 24 Copynumber: 2.0 Consensus size: 24
48782 AACTTGAATA
48792 CCTCCTTTTCAGTTAATTCTTTGT
1 CCTCCTTTTCAGTTAATTCTTTGT
*
48816 CCTCTTTTTCAGTTAATTCTTTGT
1 CCTCCTTTTCAGTTAATTCTTTGT
48840 C
1 C
48841 TTGTGTTTCA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
24 24 1.00
ACGTcount: A:0.12, C:0.24, G:0.08, T:0.55
Consensus pattern (24 bp):
CCTCCTTTTCAGTTAATTCTTTGT
Found at i:48849 original size:24 final size:24
Alignment explanation
Indices: 48798--48850 Score: 79
Period size: 24 Copynumber: 2.2 Consensus size: 24
48788 AATACCTCCT
*
48798 TTTCAGTTAATTCTTTGTCCTCTT
1 TTTCAGTTAATTCTTTGTCCTCTG
* *
48822 TTTCAGTTAATTCTTTGTCTTGTG
1 TTTCAGTTAATTCTTTGTCCTCTG
48846 TTTCA
1 TTTCA
48851 TTCATTATGG
Statistics
Matches: 26, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
24 26 1.00
ACGTcount: A:0.13, C:0.17, G:0.11, T:0.58
Consensus pattern (24 bp):
TTTCAGTTAATTCTTTGTCCTCTG
Found at i:51420 original size:1 final size:1
Alignment explanation
Indices: 51414--51444 Score: 62
Period size: 1 Copynumber: 31.0 Consensus size: 1
51404 GAGTTGAGGA
51414 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
51445 ATAGTTGGCC
Statistics
Matches: 30, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
1 30 1.00
ACGTcount: A:0.00, C:0.00, G:0.00, T:1.00
Consensus pattern (1 bp):
T
Found at i:69749 original size:14 final size:16
Alignment explanation
Indices: 69730--69797 Score: 54
Period size: 16 Copynumber: 4.4 Consensus size: 16
69720 ACATAATTTT
*
69730 TATATAACTTATAATA
1 TATATAGCTTATAATA
*
69746 TATATAGTTTATAATA
1 TATATAGCTTATAATA
69762 TAAATATAG-TT-T-ATA
1 T--ATATAGCTTATAATA
* *
69777 TATA-AACTTATATTA
1 TATATAGCTTATAATA
69792 TATATA
1 TATATA
69798 TATATATATA
Statistics
Matches: 42, Mismatches: 4, Indels: 12
0.72 0.07 0.21
Matches are distributed among these distances:
12 1 0.02
13 5 0.12
14 1 0.02
15 10 0.24
16 17 0.40
17 2 0.05
18 6 0.14
ACGTcount: A:0.47, C:0.03, G:0.03, T:0.47
Consensus pattern (16 bp):
TATATAGCTTATAATA
Found at i:69768 original size:18 final size:18
Alignment explanation
Indices: 69738--69782 Score: 69
Period size: 18 Copynumber: 2.7 Consensus size: 18
69728 TTTATATAAC
69738 TTATAATAT--ATATAGT
1 TTATAATATAAATATAGT
69754 TTATAATATAAATATAGT
1 TTATAATATAAATATAGT
69772 TTAT-ATATAAA
1 TTATAATATAAA
69783 CTTATATTAT
Statistics
Matches: 27, Mismatches: 0, Indels: 3
0.90 0.00 0.10
Matches are distributed among these distances:
16 9 0.33
17 7 0.26
18 11 0.41
ACGTcount: A:0.49, C:0.00, G:0.04, T:0.47
Consensus pattern (18 bp):
TTATAATATAAATATAGT
Found at i:69781 original size:17 final size:17
Alignment explanation
Indices: 69738--69805 Score: 68
Period size: 18 Copynumber: 3.9 Consensus size: 17
69728 TTTATATAAC
*
69738 TTATA-ATATATATAGT
1 TTATATATAAATATAGT
69754 TTATAATATAAATATAGT
1 TTAT-ATATAAATATAGT
69772 TTATATATAAACTTATA-T
1 TTATATATAAA--TATAGT
*
69790 TATATATATATATATA
1 T-TATATATAAATATA
69806 TATTATTTTT
Statistics
Matches: 45, Mismatches: 2, Indels: 9
0.80 0.04 0.16
Matches are distributed among these distances:
16 4 0.09
17 12 0.27
18 16 0.36
19 13 0.29
ACGTcount: A:0.47, C:0.01, G:0.03, T:0.49
Consensus pattern (17 bp):
TTATATATAAATATAGT
Found at i:69811 original size:19 final size:19
Alignment explanation
Indices: 69739--69807 Score: 74
Period size: 19 Copynumber: 3.7 Consensus size: 19
69729 TTATATAACT
69739 TATA-ATATATATAGTTTA
1 TATATATATATATAGTTTA
*
69757 TA-ATATAAATATAGTTTA
1 TATATATATATATAGTTTA
*
69775 TATATAAACT-TATA-TTATA
1 TATATATA-TATATAGTT-TA
69794 TATATATATATATA
1 TATATATATATATA
69808 TTATTTTTTT
Statistics
Matches: 42, Mismatches: 4, Indels: 9
0.76 0.07 0.16
Matches are distributed among these distances:
17 1 0.02
18 20 0.48
19 21 0.50
ACGTcount: A:0.48, C:0.01, G:0.03, T:0.48
Consensus pattern (19 bp):
TATATATATATATAGTTTA
Found at i:72145 original size:21 final size:20
Alignment explanation
Indices: 72121--72164 Score: 61
Period size: 21 Copynumber: 2.1 Consensus size: 20
72111 ATATGTAACT
*
72121 TATAAAATTATATAGTTTATA
1 TATAAAATTATATA-TATATA
*
72142 TATAAACTTATATATATATA
1 TATAAAATTATATATATATA
72162 TAT
1 TAT
72165 TATTTTTTTC
Statistics
Matches: 21, Mismatches: 2, Indels: 1
0.88 0.08 0.04
Matches are distributed among these distances:
20 8 0.38
21 13 0.62
ACGTcount: A:0.48, C:0.02, G:0.02, T:0.48
Consensus pattern (20 bp):
TATAAAATTATATATATATA
Done.