Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009419.1 Hibiscus syriacus cultivar Beakdansim tig00113377_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22630

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1336--1406
30
2.4
31
81
11
94
19
18
28
33
1.95
2433--2466
15
2.3
15
89
0
50
35
47
2
14
1.60
16241--16271
16
1.9
16
100
0
62
32
19
6
41
1.77
19263--19357
20
4.7
20
80
2
91
34
24
17
23
1.96
19097--19274
41
4.3
41
98
0
338
39
17
23
19
1.92
19242--19337
41
2.3
41
82
3
113
38
21
18
20
1.93
19545--19588
22
2.0
22
95
0
79
20
45
15
18
1.85
19852--19889
20
1.9
20
88
0
58
13
15
21
50
1.78
21198--21242
18
2.5
18
85
0
63
26
42
15
15
1.87
21744--21840
19
5.6
18
67
26
68
46
22
19
11
1.82
21760--21818
14
3.9
14
76
20
64
49
25
16
8
1.74
21744--21835
33
2.8
33
91
6
159
47
22
18
10
1.79
21836--21951
19
6.4
18
78
14
96
11
18
25
44
1.83
21836--21967
38
3.6
37
75
18
127
12
18
25
43
1.84
21983--22043
23
2.5
24
74
12
63
21
11
18
49
1.78

Tables:   1

The End!