Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009420.1 Hibiscus syriacus cultivar Beakdansim tig00113393_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47088

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7470--7499
2
15.5
2
93
6
53
50
0
0
50
1.00
8604--8628
2
12.5
2
100
0
50
52
0
0
48
1.00
9208--9333
57
2.2
57
89
0
189
27
15
19
37
1.92
9299--9367
34
2.0
34
97
0
129
28
10
23
37
1.87
9242--9418
91
1.9
91
88
2
266
31
12
19
36
1.90
9400--9445
20
2.3
20
84
0
65
30
15
23
30
1.95
9346--9505
77
2.1
77
86
0
221
30
13
20
36
1.90
9421--9620
57
3.5
56
88
1
292
28
14
20
37
1.91
10954--11023
35
2.0
35
91
5
115
30
15
11
42
1.82
16369--16410
19
2.2
19
100
0
84
16
14
33
35
1.89
22356--22399
2
22.0
2
100
0
88
50
0
0
50
1.00
24244--24344
29
3.4
29
91
4
148
45
2
2
48
1.32
25078--25131
28
1.9
28
84
0
72
62
5
25
5
1.39
41314--41365
27
2.0
26
81
11
61
63
1
9
25
1.35
42933--43236
152
2.0
152
98
0
590
25
14
25
34
1.94
43085--43395
170
1.8
170
98
0
604
24
16
25
33
1.96

Tables:   1

The End!