Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009421.1 Hibiscus syriacus cultivar Beakdansim tig00113394_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48393

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
447--496
24
2.1
24
100
0
100
30
34
12
24
1.91
818--864
22
2.1
22
84
0
58
53
6
17
23
1.66
12524--12600
26
2.8
27
75
15
68
64
3
10
20
1.40
14138--14440
151
2.0
152
98
0
581
25
14
25
33
1.94
14289--14599
170
1.8
170
98
0
604
24
16
25
33
1.96
22198--22277
39
2.1
39
85
4
108
21
20
27
31
1.98
25675--25703
12
2.3
13
94
5
51
68
0
0
31
0.89
28096--28306
6
36.2
6
91
5
245
33
7
0
59
1.25
37226--37332
39
2.7
38
81
5
124
18
21
25
34
1.96
43894--43920
13
2.1
13
100
0
54
14
22
22
40
1.90
46965--47178
103
2.1
100
91
3
347
37
19
11
31
1.88

Tables:   1

The End!