Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009428.1 Hibiscus syriacus cultivar Beakdansim tig00113406_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  97226

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10516--10545
13
2.4
13
94
5
53
26
30
0
43
1.55
28390--28461
17
4.2
16
79
12
72
38
12
9
38
1.76
30312--30405
2
47.5
2
97
2
181
50
0
0
50
1.00
33266--33321
5
10.6
5
80
14
51
1
16
1
80
0.88
33273--33321
17
2.9
18
80
17
52
2
16
2
79
0.92
33644--33682
20
1.9
21
84
5
53
33
0
38
28
1.57
35579--35606
11
2.5
11
100
0
56
92
7
0
0
0.37
39886--39924
15
2.5
15
87
4
51
15
12
5
66
1.41
43780--43837
29
2.0
29
96
0
107
17
5
15
62
1.50
51355--51410
13
4.7
11
74
21
51
0
19
1
78
0.84
51355--51410
18
3.1
18
82
17
71
0
19
1
78
0.84
56818--56887
34
2.1
34
100
0
140
22
22
20
34
1.97
75620--75698
42
1.9
40
90
10
124
3
30
20
45
1.68

Tables:   1

The End!