Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000943.1 Hibiscus syriacus cultivar Beakdansim tig00001883_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  108082

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4655--4713
29
2.0
30
86
3
84
38
5
11
44
1.63
4664--4723
29
2.1
29
80
0
66
46
3
10
40
1.54
9126--9317
95
2.0
95
95
0
348
39
22
14
23
1.91
11966--12013
22
2.2
22
88
0
69
41
4
0
54
1.20
11958--12020
32
2.0
32
81
6
74
39
4
0
55
1.21
11966--12037
22
3.1
23
78
11
58
41
4
0
54
1.20
17287--17315
6
4.8
6
100
0
58
0
31
51
17
1.45
18702--18749
21
2.3
21
92
0
78
43
12
16
27
1.84
23349--23396
21
2.3
21
96
0
87
41
12
18
27
1.86
27109--27161
26
2.1
26
82
3
63
47
0
5
47
1.26
29421--29513
45
2.1
45
97
0
177
19
30
6
44
1.76
33984--34010
3
9.0
3
100
0
54
66
0
0
33
0.92
51817--51847
14
2.3
13
94
5
53
64
0
0
35
0.94
56175--56230
29
1.9
30
86
13
82
35
25
12
26
1.91
62170--62286
61
1.9
61
85
0
162
24
9
12
52
1.68
65972--66030
31
1.9
31
89
0
91
38
22
5
33
1.76
69859--69900
21
1.9
23
85
9
61
57
2
7
33
1.39
82916--82950
18
1.9
18
88
0
52
28
17
0
54
1.43
87132--87192
23
2.7
23
87
2
79
13
16
13
57
1.66
103038--103064
10
2.7
10
100
0
54
7
51
0
40
1.30

Tables:   1

The End!