Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009433.1 Hibiscus syriacus cultivar Beakdansim tig00113451_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23061

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1475--1656
95
2.0
91
89
4
274
11
36
34
17
1.86
1621--1753
32
4.2
32
88
2
187
15
30
35
18
1.92
1621--1753
65
2.1
63
87
2
185
15
30
35
18
1.92
1788--1917
63
2.2
59
90
6
199
10
36
37
15
1.81
1960--2093
32
4.3
31
85
7
157
13
30
37
18
1.89
1869--2228
188
1.9
194
81
9
441
14
33
33
18
1.91
2141--2228
33
2.7
31
81
6
113
14
28
36
20
1.92
10461--10593
32
4.2
32
85
2
178
15
30
36
18
1.92
10468--10593
31
4.0
31
85
5
162
15
29
35
19
1.93
10461--10593
63
2.1
65
85
2
180
15
30
36
18
1.92
10628--10757
62
2.1
61
94
4
228
10
36
39
13
1.79
10650--10750
31
3.4
30
67
16
84
11
34
40
12
1.80
10556--10834
152
1.8
156
85
8
401
11
36
35
15
1.85
10802--10926
30
4.0
31
86
10
166
14
30
37
17
1.90
10975--11061
33
2.6
33
82
5
104
14
26
36
21
1.93
10974--11077
33
3.2
33
76
13
81
15
27
36
20
1.93

Tables:   1

The End!