Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009435.1 Hibiscus syriacus cultivar Beakdansim tig00113491_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60960

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6502--6586
33
2.6
33
88
1
118
20
34
29
16
1.94
6669--6753
33
2.6
33
90
1
127
20
35
29
15
1.93
6839--7028
32
5.7
32
76
14
170
17
34
31
15
1.92
6366--6942
167
3.4
168
93
3
975
17
32
33
16
1.92
6942--7025
33
2.6
32
86
3
107
19
34
30
15
1.93
6831--7047
104
2.1
104
93
3
366
17
32
34
16
1.92
7411--7442
11
2.9
11
95
0
55
9
40
37
12
1.75
15460--15544
33
2.6
33
88
1
118
20
34
29
16
1.94
15323--15904
169
3.4
170
96
0
1051
17
33
33
16
1.92
15629--15713
33
2.6
33
90
1
127
20
35
29
15
1.93
15798--15988
33
5.6
33
77
11
197
17
35
31
15
1.91
15798--15988
65
2.8
66
74
13
197
17
35
31
15
1.91
15790--16010
106
2.1
106
97
0
415
16
34
33
15
1.91
16379--16410
11
2.9
11
95
0
55
9
40
37
12
1.75
28985--29069
33
2.6
33
88
1
118
20
34
29
16
1.94
28848--29429
169
3.4
170
96
0
1051
17
33
33
16
1.92
29154--29238
33
2.6
33
90
1
127
20
35
29
15
1.93
29323--29513
33
5.6
33
77
11
197
17
35
31
15
1.91
29323--29513
65
2.8
66
74
13
197
17
35
31
15
1.91
29315--29535
106
2.1
106
97
0
415
16
34
33
15
1.91
29905--29936
11
2.9
11
95
0
55
9
40
37
12
1.75
42514--42598
33
2.6
33
88
1
118
20
34
29
16
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42377--42958
169
3.4
170
96
0
1051
17
33
33
16
1.92
42683--42767
33
2.6
33
90
1
127
20
35
29
15
1.93
42852--43042
33
5.6
33
77
11
197
17
35
31
15
1.91
42852--43042
65
2.8
66
74
13
197
17
35
31
15
1.91
42844--43064
106
2.1
106
97
0
415
16
34
33
15
1.91
43434--43465
11
2.9
11
95
0
55
9
40
37
12
1.75

Tables:   1

The End!