Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009439.1 Hibiscus syriacus cultivar Beakdansim tig00113497_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75780

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1298--1344
24
2.0
24
91
8
78
46
19
4
29
1.68
3386--3429
21
2.0
23
86
8
65
47
0
4
47
1.22
5820--5862
21
2.0
21
91
8
70
53
0
2
44
1.13
5856--5899
19
2.2
20
84
4
54
56
0
0
43
0.99
6256--6288
13
2.4
14
90
10
59
51
0
0
48
1.00
6228--6276
18
2.9
18
75
22
52
51
2
2
44
1.24
5875--6616
342
2.2
341
84
9
955
44
8
9
37
1.67
6525--6606
24
3.4
24
66
15
62
51
0
3
45
1.19
6525--6613
26
3.7
25
69
24
75
50
0
3
46
1.18
6609--6677
29
2.6
26
76
14
68
43
2
1
52
1.25
6636--6680
23
2.0
21
84
16
56
44
4
0
51
1.21
6636--6680
21
2.0
23
87
8
67
44
4
0
51
1.21
13148--13198
26
2.0
26
84
0
66
49
21
1
27
1.60
14669--14736
26
2.6
27
78
15
72
42
1
1
54
1.18
14693--14745
19
2.8
19
76
18
56
45
0
0
54
0.99
16852--16893
21
1.9
23
85
9
61
47
0
7
45
1.30
21243--23222
656
3.0
660
97
1
3676
43
13
18
24
1.86
27151--27215
23
2.8
23
85
0
94
29
13
21
35
1.92
28476--28510
6
5.5
6
93
6
52
0
28
57
14
1.38
28476--28513
7
5.7
7
90
9
62
0
28
55
15
1.41
28476--28513
13
2.9
14
92
7
62
0
28
55
15
1.41
28476--28513
20
1.9
20
100
0
76
0
28
55
15
1.41
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28693--28727
8
4.4
8
92
0
61
0
0
54
45
0.99
28693--28738
9
5.4
9
84
7
53
2
0
50
47
1.13
28701--28769
16
4.2
16
82
10
68
1
5
42
50
1.35
28734--28775
8
5.4
8
94
5
77
0
11
33
54
1.37
28482--29594
7
158.4
7
85
7
728
5
11
51
31
1.61
29593--75780
7
6648.6
7
98
1
71248
12
4
43
39
1.63

Tables:   1

The End!