Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000944.1 Hibiscus syriacus cultivar Beakdansim tig00001884_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70745

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15756--15874
63
1.9
63
85
3
168
45
10
4
39
1.59
19527--19611
29
2.9
29
80
0
89
20
38
27
14
1.90
19759--19842
29
2.9
29
83
0
96
15
28
38
17
1.91
21096--21140
20
2.2
20
84
7
56
28
17
8
44
1.79
21178--21219
20
2.1
20
86
0
57
35
21
2
40
1.66
21380--21502
60
2.0
60
85
3
167
34
9
15
40
1.80
25622--25684
31
2.0
31
87
6
92
38
23
19
19
1.93
27317--27369
18
2.9
18
91
0
79
22
20
32
24
1.98
28863--28906
19
2.4
19
82
14
56
52
13
2
31
1.53
31788--31944
21
7.8
20
72
7
84
38
24
17
19
1.92
31911--32155
20
12.2
20
83
5
246
37
24
18
19
1.94
31950--32155
40
5.2
40
87
5
276
35
24
18
21
1.95
32867--32913
24
2.0
24
87
8
69
25
14
21
38
1.92
33085--33109
12
2.1
12
100
0
50
72
0
28
0
0.86
35469--35696
20
11.4
20
86
4
248
19
18
25
36
1.95
37322--37355
16
2.1
17
88
5
52
52
0
11
35
1.38
38618--38656
20
2.0
20
84
0
51
46
7
2
43
1.46
45048--45120
2
36.5
2
100
0
146
49
0
0
50
1.00
46289--46359
14
5.0
14
71
21
58
53
2
0
43
1.15
46404--46434
2
15.5
2
100
0
62
48
0
0
51
1.00
47600--47670
14
5.0
14
71
21
58
53
2
0
43
1.15
51277--51446
60
2.8
60
78
7
141
32
18
4
44
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62976--63012
2
19.0
2
88
5
58
45
0
0
54
1.00
62969--63011
12
3.5
12
90
3
59
41
0
2
55
1.12
63037--63302
37
7.2
37
84
7
294
43
4
6
44
1.51
63043--63302
38
7.1
35
82
13
230
43
5
6
44
1.51
63236--63295
12
4.8
12
70
22
52
41
5
8
45
1.56
63286--63356
34
2.1
34
91
0
115
39
2
5
52
1.40
63331--63419
45
2.0
46
88
4
137
44
3
3
48
1.36
63436--63521
4
22.8
4
74
23
55
23
4
0
72
1.04
64095--64157
29
2.2
29
94
0
108
50
25
9
14
1.72
64699--64737
5
7.8
5
86
11
53
15
2
2
79
0.95
64739--64767
2
15.0
2
92
7
51
48
0
0
51
1.00
64810--64852
15
2.8
16
78
3
52
18
6
0
74
1.04
64819--64896
36
2.2
36
86
2
104
14
7
5
73
1.23
65034--65095
15
4.4
14
75
17
56
11
1
9
77
1.06
65086--65147
17
3.4
18
79
12
65
17
8
3
70
1.25

Tables:   1

The End!