Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009440.1 Hibiscus syriacus cultivar Beakdansim tig00113501_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87774

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1358--1401
22
2.0
22
90
0
70
36
36
2
25
1.69
4811--4985
80
2.2
82
83
6
214
37
19
9
33
1.83
4811--5024
41
5.3
39
76
6
158
37
19
9
33
1.84
4986--5077
41
2.2
41
81
5
105
39
17
8
34
1.80
7035--7098
31
2.1
31
84
0
83
35
15
9
39
1.80
7554--7918
41
8.9
40
74
9
220
38
20
10
31
1.86
7578--7730
40
3.8
40
77
9
139
40
20
9
28
1.85
7578--7912
123
2.7
123
81
4
338
38
20
10
30
1.87
7554--7772
81
2.7
83
82
8
268
38
21
9
31
1.85
9494--9563
36
1.9
37
88
2
106
45
8
1
44
1.43
14868--14938
24
3.1
23
76
8
56
69
4
7
19
1.29
24543--24581
2
19.5
2
100
0
78
48
0
0
51
1.00
25155--25192
13
3.0
13
88
3
51
18
13
0
68
1.21
25160--25193
12
2.7
13
90
4
52
14
11
0
73
1.10
34123--34215
32
3.1
31
74
11
77
39
10
20
29
1.86
34481--34770
144
2.0
144
97
0
544
23
11
22
43
1.85
35250--35397
77
1.9
75
84
2
197
26
4
14
54
1.59
41640--41997
178
2.0
178
100
0
716
33
11
19
36
1.87
47666--47765
47
2.1
47
85
3
130
30
26
16
28
1.96
57531--58811
4
326.5
4
84
6
1422
44
25
3
26
1.70
59332--59357
13
2.0
13
100
0
52
30
15
15
38
1.88
60678--60760
43
1.9
43
87
0
121
20
24
10
44
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61473--61542
15
4.5
15
82
5
77
5
8
34
51
1.56
61471--61552
31
2.6
31
82
0
101
8
8
31
51
1.63
65502--65551
25
2.0
25
100
0
100
16
32
28
24
1.96
68461--68513
26
2.0
26
92
0
88
26
18
16
37
1.93
68962--69085
62
2.1
59
84
7
160
26
6
8
58
1.53
72321--72362
22
1.9
22
100
0
84
50
16
4
28
1.66
81937--81977
20
2.0
20
90
0
64
31
9
21
36
1.86
87089--87244
3
50.7
3
68
16
61
58
3
6
31
1.41
87167--87209
22
2.0
21
86
4
59
58
2
4
34
1.32
87177--87243
14
4.9
13
72
15
55
56
2
4
35
1.35
87148--87228
28
2.9
27
83
9
83
55
3
4
35
1.39

Tables:   1

The End!