Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009444.1 Hibiscus syriacus cultivar Beakdansim tig00113511_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58872

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1580--1655
32
2.5
31
91
6
120
34
23
18
23
1.96
2239--2345
35
3.0
35
73
13
101
44
4
8
42
1.55
2360--2405
8
6.1
7
87
7
56
36
6
2
54
1.39
8560--8705
78
1.9
78
92
0
247
33
28
15
23
1.94
8543--8730
40
4.8
40
88
2
263
34
28
14
22
1.93
16046--16235
40
4.8
40
93
0
308
32
26
15
25
1.95
18058--18102
25
1.9
22
82
13
54
37
11
6
44
1.66
18755--18805
21
2.4
21
81
15
52
45
5
9
39
1.62
31094--31145
7
7.9
7
80
20
67
28
0
0
71
0.87
31094--31145
3
16.0
3
81
18
52
28
0
0
71
0.87
34953--34985
11
3.0
11
90
0
57
27
0
6
66
1.15
50498--50530
11
3.0
11
90
0
57
15
36
39
9
1.79
50897--51109
104
2.0
106
93
3
369
16
32
33
16
1.92
50913--51101
33
5.6
33
76
13
188
15
31
34
17
1.92
50996--51571
167
3.4
169
94
2
984
16
32
33
17
1.92
51185--51268
32
2.6
33
86
5
118
15
28
35
20
1.93
51355--51435
32
2.5
33
88
4
112
17
29
34
18
1.94

Tables:   1

The End!