Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009446.1 Hibiscus syriacus cultivar Beakdansim tig00113545_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85786

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6275--6332
31
1.9
29
82
6
71
46
15
8
29
1.75
9401--9457
21
2.7
21
80
0
78
28
22
21
28
1.99
10017--10041
13
1.9
13
100
0
50
24
0
12
64
1.27
35325--35358
16
2.1
16
88
0
50
50
0
2
47
1.16
35400--35433
16
2.0
18
88
11
54
26
2
5
64
1.30
35897--36142
130
1.9
128
93
1
420
35
13
15
36
1.86
36539--36614
35
2.2
35
92
0
125
35
1
23
39
1.63
38655--38679
2
12.5
2
100
0
50
52
0
0
48
1.00
44055--44169
61
1.9
61
83
1
151
33
13
13
40
1.82
49346--49424
35
2.2
36
84
10
101
24
3
7
64
1.36
50635--50673
17
2.3
17
95
0
69
28
20
35
15
1.93
54054--54153
51
2.0
51
90
4
157
40
14
8
38
1.75
54204--54253
25
2.0
25
100
0
100
36
16
8
40
1.77
54260--54297
19
2.0
19
100
0
76
52
10
5
31
1.58
61533--61567
16
2.1
17
94
5
63
31
8
25
34
1.86
62316--62348
15
2.1
16
88
5
50
51
15
24
9
1.72
72936--72960
12
2.1
12
100
0
50
40
24
16
20
1.91
75953--76097
68
2.1
68
92
1
238
22
21
17
38
1.93
79152--79177
12
2.2
12
100
0
52
7
11
30
50
1.67

Tables:   1

The End!