Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009456.1 Hibiscus syriacus cultivar Beakdansim tig00113706_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23458

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4880--4922
22
1.9
23
90
4
70
25
27
20
25
1.99
4927--5176
55
4.5
54
80
8
286
26
26
22
25
2.00
4934--5026
27
3.4
27
70
14
91
23
29
21
25
1.99
5043--5174
27
4.9
27
71
17
103
21
28
24
25
1.99
4930--5143
115
1.9
116
92
1
367
26
25
23
24
2.00
5041--5234
54
3.6
53
80
5
165
23
27
22
26
1.99
6006--6075
32
2.2
32
92
0
113
17
38
28
15
1.90
6039--6224
95
2.0
95
92
0
309
16
34
36
11
1.86
14419--14507
33
2.8
32
82
1
115
20
37
28
14
1.92
14554--14685
32
4.2
32
91
3
196
18
37
30
14
1.90
14552--14685
63
2.1
64
87
4
200
17
36
31
14
1.90
14769--14865
30
3.1
31
66
16
92
13
40
37
9
1.77
14732--14865
62
2.1
63
98
1
261
13
39
36
10
1.79
14649--14937
157
1.8
157
88
4
449
15
35
35
12
1.85
14797--15171
94
4.0
93
71
12
325
17
34
34
12
1.88
14900--15033
32
4.2
32
89
0
187
17
35
30
15
1.92
14493--15150
347
1.9
346
94
0
1165
17
34
34
13
1.89
23306--23389
32
2.7
31
83
1
105
21
38
25
15
1.92

Tables:   1

The End!