Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000946.1 Hibiscus syriacus cultivar Beakdansim tig00001893_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47840

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
862--907
23
2.0
23
82
0
56
30
23
21
23
1.99
885--1483
149
4.0
149
98
1
1159
36
20
15
26
1.93
885--1483
296
2.0
296
98
0
1155
36
20
15
26
1.93
2380--2414
18
1.9
18
88
11
54
22
17
5
54
1.64
2998--3042
21
2.1
21
87
0
63
15
24
28
31
1.96
3958--3995
20
1.9
20
88
0
58
26
7
2
63
1.35
4006--4039
17
2.1
16
88
5
50
26
8
0
64
1.22
5317--5345
5
5.8
5
100
0
58
17
0
0
82
0.66
6728--6766
8
5.1
7
85
14
51
12
17
12
56
1.67
6728--6766
16
2.5
15
91
4
60
12
17
12
56
1.67
7949--7987
9
4.3
9
86
0
60
84
5
10
0
0.76
7935--7993
18
3.4
17
77
9
57
77
5
15
1
1.01
7947--7993
18
2.8
16
78
12
58
80
6
12
0
0.88
8591--8634
22
2.0
22
91
8
72
38
22
11
27
1.88
9606--9868
36
7.4
36
78
9
272
26
19
13
40
1.89
9648--9832
102
1.8
102
90
2
300
28
17
14
40
1.88
9540--9931
138
2.8
138
85
1
509
28
19
12
39
1.88
9826--10000
65
2.6
65
84
4
224
33
21
9
36
1.85
10604--11053
105
4.3
105
92
2
703
32
27
18
22
1.97
14354--14392
12
3.2
12
79
13
53
28
12
23
35
1.91
14339--14453
24
4.8
24
89
4
169
25
14
20
40
1.90
15885--15933
25
2.0
25
84
8
64
36
0
10
53
1.35
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26238--26511
137
2.0
137
96
0
503
33
18
12
35
1.88
27267--27382
23
3.8
32
73
24
97
55
0
0
43
1.11
27299--27376
12
6.9
12
69
24
62
56
1
0
42
1.07
27304--27395
17
5.2
17
70
25
66
57
1
0
41
1.06
27296--27382
23
3.0
32
70
28
102
56
1
0
42
1.07
27265--27382
55
2.2
55
93
1
202
55
0
0
43
1.11
28703--28749
24
2.0
24
91
0
76
42
2
2
53
1.25
30539--30580
21
2.0
21
95
0
75
26
28
21
23
1.99

Tables:   1

The End!