Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009464.1 Hibiscus syriacus cultivar Beakdansim tig00113803_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50053

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5488--5572
33
2.6
33
88
1
118
20
34
29
16
1.94
5352--5932
169
3.4
170
95
0
1042
17
33
33
16
1.92
5657--5741
33
2.6
33
90
1
127
20
35
29
15
1.93
5826--6016
33
5.6
33
77
11
197
17
35
31
15
1.91
5826--6016
65
2.8
66
74
13
197
17
35
31
15
1.91
5818--6038
106
2.1
106
97
0
415
16
34
33
15
1.91
6406--6437
11
2.9
11
95
0
55
9
40
37
12
1.75
14500--14584
33
2.6
33
88
1
118
20
34
29
16
1.94
14668--14752
33
2.6
33
90
1
127
20
35
29
15
1.93
14363--14943
169
3.4
170
95
1
1033
17
33
32
16
1.92
14837--15027
33
5.6
33
77
11
197
17
35
31
15
1.91
14837--15027
65
2.8
66
74
13
197
17
35
31
15
1.91
14829--15049
106
2.1
106
97
0
415
16
34
33
15
1.91
15419--15450
11
2.9
11
95
0
55
9
40
37
12
1.75
27892--27976
33
2.6
33
88
1
118
20
34
29
16
1.94
27755--28336
169
3.4
170
95
0
1042
17
33
32
16
1.92
28061--28145
33
2.6
33
90
1
127
20
35
29
15
1.93
28230--28420
33
5.6
33
77
11
197
17
35
31
15
1.91
28230--28420
65
2.8
66
74
13
197
17
35
31
15
1.91
28222--28442
106
2.1
106
97
0
415
16
34
33
15
1.91
28811--28842
11
2.9
11
95
0
55
9
40
37
12
1.75
36896--36977
33
2.6
32
84
7
98
20
35
28
15
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37062--37146
33
2.6
33
90
1
127
20
35
29
15
1.93
37230--37420
33
5.6
33
77
11
197
17
35
31
15
1.91
36760--37336
168
3.4
169
94
1
993
17
33
32
16
1.92
37222--37443
106
2.1
107
96
0
410
16
34
33
15
1.90
37252--37512
106
2.5
105
86
5
332
15
35
34
14
1.88
37811--37842
11
2.9
11
95
0
55
9
40
37
12
1.75

Tables:   1

The End!