Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009470.1 Hibiscus syriacus cultivar Beakdansim tig00114143_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52800

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1652--1718
31
2.2
31
81
10
75
50
1
2
44
1.26
1651--1718
32
2.3
29
80
14
77
51
1
2
44
1.25
3255--3284
2
15.0
2
100
0
60
50
0
0
50
1.00
9195--9269
38
2.0
38
84
10
100
52
4
2
41
1.34
15018--15059
22
2.0
22
90
4
68
38
0
2
59
1.10
15025--15071
21
2.1
22
84
7
60
40
0
2
57
1.11
21632--21673
18
2.3
19
84
16
61
47
0
2
50
1.14
23994--24022
9
3.3
9
95
4
51
55
0
0
44
0.99
24233--24296
29
2.1
29
82
5
74
56
3
4
35
1.36
32743--32772
2
15.0
2
100
0
60
50
0
0
50
1.00
37340--37376
2
19.5
2
89
10
60
54
0
0
45
1.00
38655--38698
22
2.0
21
83
12
54
50
2
4
43
1.35
44398--44679
140
2.0
141
95
1
512
35
14
14
35
1.87
44876--44917
17
2.2
20
88
12
63
38
0
2
59
1.10
49970--49994
2
12.5
2
100
0
50
48
0
0
52
1.00
51275--51339
26
2.6
26
79
16
66
52
3
3
41
1.32

Tables:   1

The End!