Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009472.1 Hibiscus syriacus cultivar Beakdansim tig00114146_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19768

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
854--1033
92
2.0
92
89
2
281
12
37
32
17
1.87
998--1130
32
4.2
32
88
2
187
15
30
35
18
1.92
998--1130
65
2.1
63
87
2
185
15
30
35
18
1.92
1188--1287
30
3.4
30
66
19
75
12
36
40
12
1.79
1165--1294
60
2.1
61
92
4
219
10
38
38
12
1.78
1341--1472
32
4.2
32
92
3
205
14
31
36
18
1.90
1029--1447
153
2.7
153
76
12
458
13
35
34
16
1.89
898--1530
343
1.9
337
94
2
1078
12
35
33
17
1.88
1517--1604
33
2.7
31
81
6
113
14
28
36
20
1.92
9753--9933
95
1.9
95
91
2
301
12
36
34
17
1.87
9890--10021
33
4.1
32
87
3
176
15
31
34
18
1.92
9890--10021
65
2.0
64
85
4
176
15
31
34
18
1.92
10076--10179
31
3.3
32
68
16
101
11
34
40
13
1.81
10058--10186
62
2.1
62
98
0
249
10
36
38
13
1.80
10232--10358
32
4.2
27
82
14
85
14
31
35
18
1.91
10245--10358
32
3.6
32
94
3
194
14
28
35
20
1.92
10406--10490
33
2.6
33
85
3
111
15
27
36
21
1.93
18598--18982
94
4.1
94
72
8
368
12
36
33
17
1.88
18746--18878
32
4.2
32
88
2
187
15
30
35
18
1.92
18746--18878
65
2.1
63
87
2
185
15
30
35
18
1.92
18935--19037
31
3.4
31
68
16
97
11
34
39
13
1.81
18913--19044
62
2.1
62
97
1
248
10
37
37
13
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18841--19125
155
1.8
156
89
5
452
12
37
34
15
1.85
19090--19221
32
4.2
32
92
3
205
14
31
36
18
1.90
18629--19282
344
1.9
345
94
0
1168
13
35
33
17
1.89
19268--19356
33
2.8
32
82
1
115
14
28
37
20
1.92

Tables:   1

The End!