Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009476.1 Hibiscus syriacus cultivar Beakdansim tig00114243_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25500

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7903--7991
33
2.8
32
82
1
115
20
37
28
14
1.92
8038--8170
32
4.2
32
93
1
205
18
36
30
14
1.90
8253--8350
31
3.1
31
66
13
92
13
39
37
9
1.76
8216--8350
63
2.1
63
98
0
261
13
39
37
10
1.79
8134--8422
157
1.8
158
88
5
451
15
35
36
12
1.85
8227--8593
191
1.9
191
85
6
512
17
35
34
12
1.87
8385--8518
32
4.2
32
89
0
187
17
35
30
15
1.92
7977--8635
348
1.9
347
95
0
1192
17
34
34
13
1.88
16852--16939
32
2.8
32
80
3
106
20
37
27
14
1.92
16986--17118
32
4.2
32
93
1
205
18
36
30
14
1.90
17202--17299
31
3.1
31
66
13
92
13
39
37
9
1.76
17165--17299
63
2.1
63
98
0
261
13
39
37
10
1.79
17050--17276
95
2.4
94
71
10
244
15
37
34
12
1.85
17082--17371
158
1.8
158
89
4
460
15
35
36
12
1.85
17334--17467
32
4.2
32
89
0
187
17
35
30
15
1.92
16925--17585
349
1.9
348
95
0
1196
17
34
34
13
1.88
17228--17616
95
4.1
95
72
9
369
16
33
36
12
1.87
23296--23425
32
4.2
31
83
7
156
16
36
30
16
1.91
23296--23425
62
2.1
63
84
4
165
16
36
30
16
1.91
23389--23564
87
2.0
90
84
8
236
17
36
34
11
1.85

Tables:   1

The End!