Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009479.1 Hibiscus syriacus cultivar Beakdansim tig00114448_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56502

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1971--2053
30
2.7
31
78
14
91
20
38
24
16
1.93
1840--2386
164
3.4
162
85
11
731
17
34
30
17
1.92
2134--2213
30
2.7
30
92
0
124
17
37
28
16
1.91
2290--2366
31
2.4
32
85
8
104
18
37
27
16
1.92
1840--2426
155
3.7
159
81
11
620
16
35
30
17
1.92
2307--2476
92
1.9
91
86
13
251
16
38
28
16
1.90
2833--2864
11
2.9
11
95
0
55
9
40
37
12
1.75
10775--10862
32
2.7
33
84
7
108
19
34
29
17
1.94
10750--10865
31
3.7
32
77
11
105
17
38
26
17
1.91
10650--11209
164
3.4
165
89
7
841
16
34
32
16
1.92
10945--11027
32
2.7
32
87
7
111
18
38
28
14
1.90
11109--11187
32
2.5
32
87
6
108
17
37
27
16
1.91
11072--11264
95
2.0
95
85
9
261
16
36
30
16
1.91
11236--11425
89
2.1
93
85
10
259
17
36
33
12
1.88
11661--11692
11
2.9
11
95
0
55
9
40
37
12
1.75
25091--25182
34
2.8
31
85
11
121
18
35
30
15
1.92
25096--25179
32
2.5
34
88
7
120
20
34
29
15
1.93
24968--25522
166
3.4
167
91
6
888
17
33
32
15
1.92
25426--25594
33
5.6
32
72
22
134
17
37
29
14
1.90
26188--26219
11
2.9
11
95
0
55
9
40
37
12
1.75
34253--34337
33
2.6
33
88
1
118
20
34
29
16
1.94
34116--34697
169
3.4
170
96
0
1051
17
33
33
16
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34422--34506
33
2.6
33
90
1
127
20
35
29
15
1.93
34591--34781
33
5.6
33
77
11
197
17
35
31
15
1.91
34591--34781
65
2.8
66
74
13
197
17
35
31
15
1.91
34583--34803
106
2.1
106
97
0
415
16
34
33
15
1.91
35173--35204
11
2.9
11
95
0
55
9
40
37
12
1.75
48982--49066
33
2.6
33
88
1
118
20
34
29
16
1.94
48845--49426
169
3.4
170
96
0
1051
17
33
33
16
1.92
49151--49235
33
2.6
33
90
1
127
20
35
29
15
1.93
49320--49510
33
5.6
33
77
11
197
17
35
31
15
1.91
49320--49510
65
2.8
66
74
13
197
17
35
31
15
1.91
49312--49532
106
2.1
106
97
0
415
16
34
33
15
1.91
49902--49933
11
2.9
11
95
0
55
9
40
37
12
1.75

Tables:   1

The End!