Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009488.1 Hibiscus syriacus cultivar Beakdansim tig00114591_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16461

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4865--4953
33
2.8
32
82
1
115
20
37
28
14
1.92
5000--5131
32
4.2
32
93
2
205
18
36
31
14
1.90
5177--5305
60
2.2
59
94
5
224
13
38
37
10
1.79
5188--5276
29
3.0
29
63
21
67
15
42
31
10
1.80
5096--5377
152
1.8
154
88
7
432
15
35
36
12
1.85
5340--5472
32
4.2
32
88
2
178
18
35
30
15
1.92
5340--5472
63
2.1
65
85
2
180
18
35
30
15
1.92
5436--5621
95
2.0
95
91
2
302
16
34
36
11
1.86
13800--13887
33
2.7
31
81
6
113
20
36
28
14
1.92
13933--14063
32
4.2
32
93
3
205
18
35
31
14
1.91
14109--14242
62
2.1
63
97
1
252
13
38
37
10
1.79
14029--14314
156
1.8
155
87
6
427
15
34
37
12
1.85
13997--14219
94
2.4
91
69
12
218
16
35
35
12
1.86
14172--14556
94
4.1
94
71
9
343
17
33
36
12
1.87
14277--14409
32
4.2
32
89
1
187
18
35
30
15
1.92
14277--14409
65
2.1
63
87
2
185
18
35
30
15
1.92
13874--14508
345
1.8
342
94
2
1121
17
34
35
12
1.88
14171--14564
93
4.2
94
71
17
316
17
34
36
12
1.87

Tables:   1

The End!