Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000095.1 Hibiscus syriacus cultivar Beakdansim tig00000178_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65776

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
746--783
17
2.2
17
95
0
67
36
10
21
31
1.87
791--1047
42
6.0
43
75
14
196
40
10
18
30
1.84
782--1029
85
2.9
86
83
8
285
41
9
18
30
1.83
3949--3993
18
2.5
18
88
0
63
48
26
2
22
1.62
7951--7998
25
1.9
25
82
0
60
37
31
2
29
1.69
23078--23107
15
2.0
15
100
0
60
33
13
26
26
1.93
23439--23488
25
2.0
25
96
0
91
38
20
26
16
1.92
27117--27225
3
36.7
3
94
1
193
64
0
1
33
1.05
27543--28305
113
6.8
113
97
0
1375
28
19
14
37
1.91
28956--29424
83
5.7
83
93
2
784
36
23
13
26
1.92
30561--30636
8
9.2
8
69
21
50
3
14
1
80
0.92
30571--30610
18
2.2
18
86
0
53
7
12
2
77
1.07
30567--30636
17
3.8
18
76
14
54
4
14
1
80
0.94
30565--30633
12
5.8
12
74
16
54
4
14
1
79
0.95
37956--37986
15
2.1
15
93
0
53
48
3
19
29
1.64
43428--43544
3
38.7
3
91
1
189
62
0
2
35
1.09
58952--59012
21
3.2
21
65
29
64
31
4
21
42
1.74
58950--59052
35
2.9
36
94
4
181
30
4
20
44
1.72
60252--60283
15
2.1
15
94
0
55
53
15
25
6
1.65
62842--62890
25
2.0
25
100
0
98
16
32
6
44
1.72
64366--64426
23
3.0
20
88
9
79
19
26
32
21
1.97

Tables:   1

The End!